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Gene/Protein Characteristic Table for FLJ00098

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Product ID	ORK05074
Accession No	AK024493
Clone name	as00098
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4318 bp) Predicted protein sequence (780 aa)
Source	Human spleen
Rouge ID	mFLJ00098 by Kazusa Mouse cDNA Project

Length: 4318 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 780 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR004841	1	393	PF00324	Amino acid permease-associated region
ProfileScan	IPR002293	117	294	PS50285	Amino acid/polyamine transporter I

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	60	EIQGIPGAASGVFLENLWSTYAH	82	SECONDARY	23
	2	108	YVLTDIAASFTLLVGIYFPSVTG	130	SECONDARY	23
	3	153	ILAIVTTSFIYLSCIVLFGACIE	175	PRIMARY	23
	4	190	NLVIGMLAWPSPWVIVIGSFFST	212	SECONDARY	23
	5	252	TWALLLTVLICETGILIASLDSV	274	PRIMARY	23
	6	278	LSMFFLMCYLFVNLACAVQTLLR	300	PRIMARY	23
	7	319	GMSLCLALMFICSWYYALSAMLI	341	PRIMARY	23

RT-PCR-ELISA

Experimental conditions

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