Gene/Protein Characteristic Table for KIAA1878
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Product ID ORK05926
Accession No AB058781
Description microtubule-associated protein 6, transcript variant 2
Clone name pj01649
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4328 bp)
Predicted protein sequence (453 aa)
Flexi ORF Clone FXC05926
Source Human brain (hippocampus)
Rouge ID mKIAA1878 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 4328 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning Warning
Integrity of 3' end
Length of 3'UTR 2943 bp
Genome contig ID gi51511727r_74891554
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 11 r 74991554 75057127 3 99.0 Perfect prediction
Features of the protein sequence

Length: 453 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
AAI50255 1e-124 100.0 Microtubule-ass...
Homo sapiens
NP_997460 1.7e-124 99.8 microtubule-ass...
Homo sapiens
Q96JE9 2.5e-124 99.8 Microtubule-ass...
Homo sapiens
XP_001175009 6.4e-123 98.9 microtubule-ass...
Pan troglodytes
XP_508647 9.7e-123 98.9 microtubule-ass...
Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR007882 15 453 PF05217 STOP
Expression profile

Experimental conditions
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information

Chromosome No. 11
Experimental conditions
Panel name CCR
PCR product length 95 bp
PCR conditions 15 °C64 sec60 °C30 sec193 cycles
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