Gene/Protein Characteristic Table for KIAA1161
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Product ID ORK00192
Accession No AB032987
Description KIAA1161
Clone name hj01210s1
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5839 bp)
Predicted protein sequence (680 aa)
Flexi ORF Clone FXC00192
Source Human adult brain
Rouge ID mKIAA1161 by Kazusa Mouse cDNA Project
Note We replaced hj01210, former representative clones for KIAA1161 with hj01210s1. (2003/4/2)
Features of the cloned cDNA sequence
Description

Length: 5839 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Features of the protein sequence
Description

Length: 680 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
XP_001097912 0 98.5 similar to CG11...
Macaca mulatta
XP_607425 0 95.7 similar to CG11...
Bos taurus
XP_531978 0 95.4 similar to CG11...
Canis lupus fam...
XP_001498447 0 95.2 similar to CG11...
Equus caballus
AAI40957 0 94.0 AI464131 protei...
Mus musculus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
D42041 5.5e-11 26.0 KIAA0088
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR000322 248 678 PF01055 Glycoside hydrolase

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
SOSUI2 1 23 LLGSAVLGLLLVLAAVVAWCYYS 45 PRIMARY 23
Experimental conditions
Primer_f CGGCCATGCAGTTCTCTATCC
Primer_r AGTCGATACGGTGAGCTGTCT
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 9
Experimental conditions
Panel name GeneBridge 4
Primer_f CGGCCATGCAGTTCTCTATCC
Primer_r AGTCGATACGGTGAGCTGTCT
PCR product length 201 bp
PCR conditions 95 °C15 sec66 °C60 sec30 cycles
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