Gene/Protein Characteristic Table for KIAA1034
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Product ID ORK00718
Accession No AB028957
Description SATB homeobox 2, transcript variant 2
Clone name fh00753
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4999 bp)
Predicted protein sequence (761 aa)
Flexi ORF Clone FXC00718
Source Human fetal brain
Rouge ID mKIAA1034 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 4999 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 2711 bp
Genome contig ID gi89161199r_199742469
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 2 r 199842469 200033446 11 99.4 Perfect prediction
Features of the protein sequence

Length: 761 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAD92613 0 100.0 SATB family mem...
Homo sapiens
XP_516012 0 100.0 SATB family mem...
Pan troglodytes
Q9UPW6 0 100.0 DNA-binding pro...
Homo sapiens
BAG51771 0 99.9 unnamed protein...
Homo sapiens
XP_614966 0 99.5 similar to SATB...
Bos taurus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR003350 383 465 PF02376 Homeodomain protein CUT
IPR003350 501 588 PF02376 Homeodomain protein CUT
IPR001356 643 700 PF00046 Homeobox
HMMSmart IPR001356 642 705 SM00389 Homeobox
ProfileScan IPR003350 378 465 PS51042 Homeodomain protein CUT
IPR003350 501 588 PS51042 Homeodomain protein CUT
IPR001356 640 701 PS50071 Homeobox
Expression profile

Experimental conditions
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information

Chromosome No. 2
Experimental conditions
Panel name UniGene
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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