hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15314826/chunk_1/iprscan-20080501-15314826.nocrc
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Query sequence: KIAA1034
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00389                                                  41.1    1.5e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00389    1/1     642   705 ..     1    63 []    41.1  1.5e-07

Alignments of top-scoring domains:
SM00389: domain 1 of 1, from 642 to 705: score 41.1, E = 1.5e-07
                   *->krrkRtsftpeQleeLEkeFeknp.YPsreereeLAkeLgLterqVk
                      k+r+Rt ++ e+l +L+ + ++   YP+ e +  L+++L L++  + 
    KIAA1034   642    KPRSRTKISLEALGILQSFIHDVGlYPDQEAIHTLSAQLDLPKHTII 688  

                   vWFQNRRakwkrqekkk<-*
                     FQN+R+  k++ k k   
    KIAA1034   689 KFFQNQRYHVKHHGKLK    705  

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