Gene/Protein Characteristic Table for KIAA0989
Order Kazusa clone(s) from : Japan || Other countries
Product ID ORK00709
Accession No AB023206
Description angiomotin like 2, transcript variant 2
Clone name hk05377
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4412 bp)
Predicted protein sequence (859 aa)
Flexi ORF Clone FXC00709
Source Human adult brain
Rouge ID mKIAA0989 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 4412 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning Warning
Integrity of 3' end
Length of 3'UTR 1831 bp
Genome contig ID gi89161205r_135457406
PolyA signal sequence
(ATTAAA,-10)
+----*----+----*----+----*----+----
ACAGTATTTTAATTAAAAAATAATAATTAAAAGTG
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
ATGTCTTTGCACAGGTGAGACTTTGCACTGAGGGAAGGGAAAGGGTGAGG

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 3 r 135557406 135576052 10 99.4 Perfect prediction
Features of the protein sequence
Description

Length: 859 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAA76833 0 100.0 angiomotin like...
Homo sapiens
BAD97318 0 99.5 Angiomotin like...
Homo sapiens
BAH12987 0 96.5 unnamed protein...
Homo sapiens
XP_001112164 0 94.4 similar to angi...
Macaca mulatta
BAF84305 0 100.0 unnamed protein...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB028994 4.8e-28 50.6 KIAA1071
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR009114 445 463 PR01807 Angiomotin
IPR009114 468 483 PR01807 Angiomotin
IPR009114 558 572 PR01807 Angiomotin
IPR009114 574 591 PR01807 Angiomotin
IPR009114 638 655 PR01807 Angiomotin
IPR009114 659 676 PR01807 Angiomotin
IPR009114 717 732 PR01807 Angiomotin
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f GTGGGTTTTAGCAGTTTTGTC
Primer_r AGGAAACTTGAGGAACCATGG
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 3
Experimental conditions
Panel name UniGene
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
Order Kazusa clone(s) from : Japan || Other countries
Back to the HUGE Protein Database homepage
Send a message to office AT kazusa.or.jp