Gene/Protein Characteristic Table for KIAA0779
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Product ID ORK07129
Accession No AB018322
Description transmembrane and coiled-coil domain family 1
Clone name hk05356
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (3743 bp)
Predicted protein sequence (320 aa)
Source Human adult brain
Rouge ID mKIAA0779 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 3743 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Features of the protein sequence
Description

Length: 320 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
CAE45831 6.2e-106 100.0 hypothetical pr...
Homo sapiens
BAG56915 8.2e-106 100.0 unnamed protein...
Homo sapiens
EAW79233 8.3e-106 100.0 transmembrane a...
Homo sapiens
EAW79231 9e-106 100.0 transmembrane a...
Homo sapiens
NP_001121696 9e-106 100.0 transmembrane a...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB007950 3e-44 64.0 KIAA0481
AB032971 1.3e-31 53.3 KIAA1145
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom NULL 123 186 PD068654 NULL

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
SOSUI2 1 257 INILLAVMAVLLVFVSTVANCVV 279 PRIMARY 23
2 287 RTFSTLFLVVFIAFLWKHWDALF 309 SECONDARY 23
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f CAGTAATGGCTTTCTTGTCCC
Primer_r AGAGCGAGGTTATAGAAGAGC
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 3
Experimental conditions
Panel name UniGene
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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