Gene/Protein Characteristic Table for KIAA0751
Order Kazusa clone(s) from : Japan || Other countries
Product ID ORK01118
Accession No AB018294
Description regulating synaptic membrane exocytosis 2, transcript variant 3
Clone name hk04424
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (3854 bp)
Predicted protein sequence (1200 aa)
Flexi ORF Clone FXC01118
Source Human adult brain
Rouge ID mKIAA0751 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 3854 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 39 bp
Genome contig ID gi51511724f_104800664
PolyA signal sequence
(None)
+----*----+----*----+----*----+----
TGTAAAAAAATTGTTGTCACAGCAACCAGCGTTAC
Flanking genome sequence
(532601 - 532650)
----+----*----+----*----+----*----+----*----+----*
AAAAAAAAAAAAAAAAATCACAGGTTGCAAACCCTGGTAACACTGCATGC

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 8 f 104900664 105333263 21 99.9 Perfect prediction
Features of the protein sequence
Description

Length: 1200 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
EAW91890 0 100.0 regulating syna...
Homo sapiens
XP_519899 0 99.8 regulating syna...
Pan troglodytes
XP_859448 0 97.9 similar to Regu...
Canis lupus fam...
Q9UQ26 0 100.0 Regulating syna...
Homo sapiens
XP_859268 0 97.8 similar to Regu...
Canis lupus fam...
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB002338 2.3e-67 55.9 KIAA0340
D87074 2.7e-34 69.5 KIAA0237
AB011131 0.00021 24.7 KIAA0559
AB018290 0.00045 29.7 KIAA0747
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR000008 626 638 PR00360 C2 calcium-dependent membrane targeting
IPR000008 655 668 PR00360 C2 calcium-dependent membrane targeting
HMMPfam IPR001478 457 542 PF00595 PDZ/DHR/GLGF
IPR000008 611 702 PF00168 C2 calcium-dependent membrane targeting
IPR000008 1061 1148 PF00168 C2 calcium-dependent membrane targeting
HMMSmart IPR001478 466 545 SM00228 PDZ/DHR/GLGF
IPR000008 610 717 SM00239 C2 calcium-dependent membrane targeting
IPR000008 1060 1163 SM00239 C2 calcium-dependent membrane targeting
ProfileScan IPR001478 457 543 PS50106 PDZ/DHR/GLGF
IPR000008 607 702 PS50004 C2 calcium-dependent membrane targeting
IPR000008 1060 1148 PS50004 C2 calcium-dependent membrane targeting
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f TCCCACCTTCCTCCCTAGTAG
Primer_r TGAACGAGAGTAAGAAGGTCC
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 8
Experimental conditions
Panel name UniGene
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
Order Kazusa clone(s) from : Japan || Other countries
Back to the HUGE Protein Database homepage
Send a message to office AT kazusa.or.jp