Gene/Protein Characteristic Table for KIAA0539
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Product ID ORK07304
Accession No AB011111
Description URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
Clone name pf00803
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (7594 bp)
Predicted protein sequence (2046 aa)
Source Human brain (hippocampus)
Rouge ID mKIAA0539 by Kazusa Mouse cDNA Project
Note We replaced hg04107, former representative clones for KIAA0539 with pf00803. (2002/5/10)
Features of the cloned cDNA sequence

Length: 7594 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 1451 bp
Genome contig ID gi51511750r_32507649
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 21 r 32607649 32669654 34 99.6 Perfect prediction
Features of the protein sequence

Length: 2046 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
AAF72943 0 100.0 C21orf108 [Homo...
Homo sapiens
O60287 0 100.0 Nucleolar pre-r...
Homo sapiens
EAX09876 0 99.9 hCG401196, isof...
Homo sapiens
XP_531425 0 98.8 nucleolar preri...
Pan troglodytes
XP_001498726 0 82.7 similar to Nucl...
Equus caballus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Expression profile

Experimental conditions
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information

Chromosome No. 21
Experimental conditions
Panel name GeneBridge 4
PCR product length 142 bp
PCR conditions 95 °C15 sec64 °C60 sec30 cycles
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