Gene/Protein Characteristic Table for KIAA0193
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Product ID ORK00450
Accession No D83777
Description secernin 1, transcript variant 2
Clone name bh00167
Vector information
The cDNA fragment was inserted at the XhoI-SacI site of the ...
cDNA sequence DNA sequence (5203 bp)
Predicted protein sequence (443 aa)
Flexi ORF Clone FXC00450
Source Human adult brain
Rouge ID mKIAA0193 by Kazusa Mouse cDNA Project
Note We replaced ha02308, former representative clones for KIAA0193 with bh00167. (2002/5/10)
Features of the cloned cDNA sequence

Length: 5203 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning Warning
Integrity of 3' end
Length of 3'UTR 3844 bp
Genome contig ID gi89161213r_29826268
PolyA signal sequence
Flanking genome sequence
(99984 - 99935)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 7 r 29926252 29995895 8 99.2 Perfect prediction
Features of the protein sequence

Length: 443 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q12765 8e-181 100.0 Secernin-1.
Homo sapiens
BAG58182 1.5e-180 99.8 unnamed protein...
Homo sapiens
AAH40492 5.1e-180 99.8 Secernin 1 [Hom...
Homo sapiens
XP_519021 2.2e-177 98.3 secernin 1 [Pan...
Pan troglodytes
XP_001499496 1.7e-168 89.3 similar to Sece...
Equus caballus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR005322 38 388 PF03577 Peptidase C69
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 7
Experimental conditions
Panel name Genebridge 4
PCR product length 188 bp
PCR conditions 95 °C15 sec62 °C60 sec30 cycles
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