hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19560587/chunk_1/iprscan-20080501-19560587.nocrc
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Query sequence: KIAA0193
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF03577.5.fs  Peptidase family C69                      107.2    1.1e-31   2
PF03577.5.ls  Peptidase family C69                       48.7    5.2e-18   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF03577.5.ls    1/1      38   388 ..     1   456 []    48.7  5.2e-18
PF03577.5.fs    1/2      82   257 ..    68   262 ..   106.1  2.3e-31

Alignments of top-scoring domains:
PF03577.5.ls: domain 1 of 1, from 38 to 388: score 48.7, E = 5.2e-18
                   *->aCTtiLVGKkASaDGSTiIARNEDSyglgggainPkkfvVvpaktye
                         +++  ++   DG + +++N+      +++++++++v   a ++e
    KIAA0193    38    ---CFVAFPPRAKDGLVVFGKNSA-----RPRDEVQEVVYFSAADHE 76   

                   dqprhYkSvtsgftipLPdnplrYTstpnasegddgkdGiweEAGiNean
                                  p ++ +++Y+s+ ++ ++ +   +i+++A++++a+
    KIAA0193    77 ---------------PESKVECTYISIDQVPRTYAI--MISRPAWLWGAE 109  

                   VaMSATETittNerVLgaDPlvvadsegGigEedlltlvLPYikSAREGV
                   +++++++++++Ne++ +++P     + +++ ++dl++l+L++  +A+E++
    KIAA0193   110 MGANEHGVCIANEAINTREPAA---EIEALLGMDLVRLGLERGETAKEAL 156  

                   erLGaLlEeYGtyGNCLEDA.APFSEgNGvaFsDkdEIWyLETiGGHhWv
                    ++  LlEe+G++GN  EDA+   S  +  +++D+dE+W+LETi G +W+
    KIAA0193   157 DVIVSLLEEHGQGGNYFEDAnSCHSFQSAYLIVDRDEAWVLETI-GKYWA 205  

                   AvRiPDDaYavapNQlrIdefDfnDklGQdNymaSpDLkeFaeenhLnpt
                   A ++ ++ + + + Ql++ + +++          +p+L++ a+ ++++ +
    KIAA0193   206 AEKVTEGVRCICS-QLSLTT-KMDAE--------HPELRSYAQSQGWWTG 245  

                   keldegFNfRkiFGLtqsekDrhYNtPRvWygQrllndhgedydPeietq
                   ++   +FNf ++F+   +  D+  +     +g   l           +  
    KIAA0193   246 EG---EFNFSEVFS---PVEDHLDCG----AGKDSLE----------K-- 273  

                   dPesqdlPfirkPDPnrKIsveDVkfvLssHYegTcmpyDPyGsfkqGta
                                  +  I+v+ +++ L+++ +g c              
    KIAA0193   274 --------------QEESITVQTMMNTLRDKASGVCI------------- 296  

                   eekkrfRedfyerPIGinRtqeshvlQiRpnvPqeiagvqWlAfGspsfn
                                ++  + t++s v+++++n   + + +  +++++ps++
    KIAA0193   297 -------------DSEFFLTTASGVSVLPQNRSSP-CIHYFTGTPDPSRS 332  

                   vyvPFYa..nvndtpaayrRVdtttkvdldwnsaYWlfrtlavLvdshYd
                   +++PF++ + v+  p ++     + ++d d  +a   +r++   +++h  
    KIAA0193   333 IFKPFIFvdDVKLVPKTQS----PCFGDDD--PAKKEPRFQEKPDRRHEL 376  

                   efggdvqayqke<-*
                   + +++ +++  e   
    KIAA0193   377 YKAHEWARAIIE    388  

PF03577.5.fs: domain 1 of 2, from 82 to 257: score 106.1, E = 2.3e-31
                   *->plrYTstpnasegddgkdGiweEAGiNeanVaMSATETittNerVLg
                      +++Y+s+ ++ ++ +   +i+++A++++a++++++++++++Ne++ +
    KIAA0193    82    ECTYISIDQVPRTYAI--MISRPAWLWGAEMGANEHGVCIANEAINT 126  

                   aDPlvvadsegGigEedlltlvLPYikSAREGVerLGaLlEeYGtyGNCL
                   ++P     + +++ ++dl++l+L++  +A+E++ ++  LlEe+G++GN  
    KIAA0193   127 REPAA---EIEALLGMDLVRLGLERGETAKEALDVIVSLLEEHGQGGNYF 173  

                   EDA.APFSEgNGvaFsDkdEIWyLETiGGHhWvAvRiPDDaYavapNQlr
                   EDA+   S  +  +++D+dE+W+LETi G +W+A ++ ++ + + + Ql+
    KIAA0193   174 EDAnSCHSFQSAYLIVDRDEAWVLETI-GKYWAAEKVTEGVRCICS-QLS 221  

                   IdefDfnDklGQdNymaSpDLkeFaeenhLnptkeldegFNfRkiFGLt<
                   + + +++          +p+L++ a+ ++++ +++   +FNf ++F+ + 
    KIAA0193   222 LTT-KMDAE--------HPELRSYAQSQGWWTGEG---EFNFSEVFS-P  257  

                   -*
                     
    KIAA0193     -    -    

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