Gene/Protein Characteristic Table for KIAA0168
Order Kazusa clone(s) from : Japan || Other countries
Product ID ORK00440
Accession No D79990
Description Ras association (RalGDS/AF-6) domain family member 2, transcript variant 1
Clone name ha02316
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (5426 bp)
Predicted protein sequence (331 aa)
Flexi ORF Clone FXC00440
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0168 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 5426 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 4249 bp
Genome contig ID gi51511747r_4608670
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 20 r 4708670 4752291 12 100.0 Perfect prediction
Features of the protein sequence

Length: 331 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
P50749 1.5e-127 100.0 Ras association...
Homo sapiens
XP_001164287 1.8e-127 99.7 Ras association...
Pan troglodytes
BAD96370 1.4e-126 99.4 Ras association...
Homo sapiens
XP_542904 6.5e-123 95.7 similar to Ras ...
Canis lupus fam...
XP_001925229 1.8e-122 96.0 similar to Ras ...
Sus scrofa
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR000159 181 269 PF00788 Ras-association
HMMSmart IPR000159 179 270 SM00314 Ras-association
ProfileScan IPR000159 181 269 PS50200 Ras-association
IPR011524 277 324 PS50951 SARAH
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 20
Experimental conditions
Panel name Stanford G3
PCR product length 303 bp
PCR conditions 95 °C15 sec62 °C60 sec30 cycles
Order Kazusa clone(s) from : Japan || Other countries
Back to the HUGE Protein Database homepage
Send a message to office AT