Gene/Protein Characteristic Table for KIAA0124
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Product ID ORK04281
Accession No D50914
Description block of proliferation 1
Clone name ha01534
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (2108 bp)
Predicted protein sequence (682 aa)
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0124 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 2108 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 59 bp
Genome contig ID gi51511724r_145288996
PolyA signal sequence
(None)
+----*----+----*----+----*----+----
GTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTG
Flanking genome sequence
(167873 - 167824)
----+----*----+----*----+----*----+----*----+----*
TGCTGCCTGGTGCTCCCACCTTCTTGAATTGGGGTTGCCAACAAAGCCGC

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 8 r 145456869 145483700 15 99.9 Perfect prediction
Features of the protein sequence
Description

Length: 682 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
AAH05160 0 99.9 BOP1 protein [H...
Homo sapiens
AAH07274 0 99.9 Similar to bloc...
Homo sapiens
Q14137 0 99.9 Ribosome biogen...
Homo sapiens
BAF83366 0 99.6 unnamed protein...
Homo sapiens
BAG37981 0 99.6 unnamed protein...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom IPR001680 344 378 PD000018 WD40 repeat
HMMPfam IPR012953 80 338 PF08145 BOP1
IPR001680 339 377 PF00400 WD40 repeat
IPR001680 506 542 PF00400 WD40 repeat
IPR001680 546 584 PF00400 WD40 repeat
IPR001680 589 627 PF00400 WD40 repeat
IPR001680 644 682 PF00400 WD40 repeat
HMMSmart IPR001680 338 377 SM00320 WD40 repeat
IPR001680 380 419 SM00320 WD40 repeat
IPR001680 458 501 SM00320 WD40 repeat
IPR001680 504 542 SM00320 WD40 repeat
IPR001680 545 584 SM00320 WD40 repeat
IPR001680 588 627 SM00320 WD40 repeat
IPR001680 639 682 SM00320 WD40 repeat
ProfileScan IPR001680 345 386 PS50082 WD40 repeat
IPR001680 345 386 PS50294 WD40 repeat
IPR001680 511 682 PS50294 WD40 repeat
IPR001680 595 625 PS50082 WD40 repeat
ScanRegExp IPR001680 364 378 PS00678 WD40 repeat
Expression profile
Description

Northern blot
Experimental conditions
Primer_f
Primer_r
PCR conditions test

RH mapping information
Description

Chromosome No. 8
Experimental conditions
Panel name Genebridge 4
Primer_f ATGATGACGAAGGCGACGAGG
Primer_r GCTGTCCTCCGCATACTCATC
PCR product length 219 (0.3k) bp
PCR conditions 95 °C15 sec62 °C120 sec30 cycles
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