Gene/Protein Characteristic Table for KIAA0066
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Product ID ORK01052
Accession No D31886
Description RAB3 GTPase activating protein subunit 1 (catalytic), transcript variant 2
Clone name ha01217
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (3635 bp)
Predicted protein sequence (981 aa)
Flexi ORF Clone FXC01052
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0066 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 3635 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 687 bp
Genome contig ID gi89161199f_135426468
PolyA signal sequence
(None)
+----*----+----*----+----*----+----
ATGTCACTGCAAATTAGTTTTATATCTGTCATGTG
Flanking genome sequence
(217042 - 217091)
----+----*----+----*----+----*----+----*----+----*
AGATTTGTCTTACTTATTTTTCTTTTGGTTGCCATGGAAGTTATGGCCCT

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 2 f 135526346 135643508 24 100.0 Perfect prediction
Features of the protein sequence
Description

Length: 981 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
XP_525929 0 99.7 RAB3 GTPase-act...
Pan troglodytes
XP_001153005 0 99.0 RAB3 GTPase-act...
Pan troglodytes
XP_001152623 0 99.7 RAB3 GTPase-act...
Pan troglodytes
XP_001096972 0 97.8 similar to RAB3...
Macaca mulatta
XP_001489520 0 95.9 similar to RAB3...
Equus caballus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Expression profile
Description

Northern blot
Experimental conditions
Primer_f
Primer_r
PCR conditions test

RH mapping information
Description

Chromosome No. 2
Experimental conditions
Panel name Genebridge 4
Primer_f TGAGGGGAAAAAGACAAGTGC
Primer_r CCTACCTCTCCCTTTTCCTTA
PCR product length 123 bp
PCR conditions 95 °C15 sec64 °C60 sec30 cycles
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