HUGE

Bibliography


Preparation of a set of expression-ready clones of mammalian long cDNAs encoding large proteins by the ORF trap cloning method.
Nakajima D, Saito H,Yamakawa H, Kikuno R. F., Nakayama M, Ohara R.,Okazaki N, Koga H, Nagase T., and Ohara O.
DNA Res. 12, 221-233, (2005).

HUGE: a database for human KIAA proteins, a 2004 update integrating HUGEppi and ROUGE.
Kikuno R, Nagase T, Nakayama M, Koga H, Okazaki N, Nakajima D, and Ohara O.
Nucleic Acids Res. 32, D502-504, (2004).

Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones (supplement).
Nakajima D, Okazaki N, Yamakawa H, Kikuno R, Ohara O, and Nagase T.
DNA Res. 9, 107-15, (2002).

Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones.
Nakajima D, Okazaki N, Yamakawa H, Kikuno R, Ohara O, and Nagase T.
DNA Res. 9, 99-106, (2002).

[Comprehensive analysis of human large cDNAs which directs the synthesis of large proteins]
Ohara O, Nagase T, Kikuno R, and Oishi M.
Tanpakushitsu Kakusan Koso. 47, 991-6, (2002).

Characterization of size-fractionated cDNA libraries generated by the in vitro recombination-assisted method.
Ohara O, Nagase T, Mitsui G, Kohga H, Kikuno R, Hiraoka S, Takahashi Y, Kitajima S, Saga Y, and Koseki H.
DNA Res. 9, 47-57, (2002).

HUGE: a database for human large proteins identified in the Kazusa cDNA sequencing project.
Kikuno R., Nagase T., Waki M., and Ohara O.
Nucleic Acids Res. 30, 166-1668, (2002).

Prediction of the coding sequences of unidentified human genes. XXII. The complete sequences of 50 new cDNA clones which code for large proteins.
Nagase T., Kikuno R., and Ohara O.
DNA Res. 8, 319-327, (2001).

Identification of three novel non-classical cadherin genes through comprehensive analysis of large cDNAs.
Nakajima D., Nakayama M., Kikuno R., Hirosawa M., Nagase T., and Ohara O.
Brain Res Mol Brain Res. 94, 85-95, (2001).

Prediction of the coding sequences of unidentified human genes. XXI. The complete sequences of 60 new cDNA clones from brain which code for large proteins.
Nagase T., Kikuno R., and Ohara O.
DNA Res. 8, 179-187, (2001).

Prediction of the coding sequences of unidentified human genes. XX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.
Nagase T., Nakayama M., Nakajima D., Kikuno R., and Ohara O.
DNA Res. 8, 85-95, (2001).

Identification of novel transcribed sequences on human chromosome 22 by expressed sequence tag mapping.
Hirosawa M., Nagase T., Murahashi Y., Kikuno R., and Ohara O.
DNA Res. 8, 1-9, (2001).

Prediction of the coding sequences of unidentified human genes. XIX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.
Nagase T., Kikuno R., Hattori A., Kondo Y., Okumura K., and Ohara O.
DNA Res. 7, 357-366, (2000).

Detection of spurious interruptions of protein-coding regions in cloned cDNA sequences by GeneMark analysis.
Hirosawa H., Ishikawa K-i., Nagase T., and Ohara O.
Genome Res. 9, 1333-1341, (2000).

Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.
Nagase T., Kikuno R., Nakayama M, Hirosawa M., and Ohara O.
DNA Res. 7, 273-281, (2000).

Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.
Nagase T., Kikuno R., Ishikawa K.-I., Hirosawa M., and Ohara O.
DNA Res. 7, 143-150, (2000).

Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro.
Nagase T., Kikuno R., Ishikawa K.-I., Hirosawa M., and Ohara O.
DNA Res. 7, 65-73, (2000).

HUGE: a database for human large proteins identified in the Kazusa cDNA sequencing project.
Kikuno R., Nagase T., Suyama M., Waki M., Hirosawa M., and Ohara O.
Nucleic Acids Res. 28, 331-332, (2000).

Prediction of the coding sequences of unidentified human genes. XV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.
Nagase T., Ishikawa K.-I., Kikuno R., Nomura N., and Ohara O.
DNA Res. 6, 337-345, (1999).

Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain.
Hirosawa M., Nagase T., Ishikawa K.-I., Kikuno R., Nomura N., and Ohara O.
DNA Res. 6, 329-336, (1999).

Prediction of the coding sequences of unidentified human genes. XIV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.
Kikuno, R., Nagase T., Ishikawa K.-I., Hirosawa, M., Miyajima,N., Tanaka, A., Kotani, H., Nomura N., and Ohara O.
DNA Res. 6, 197-205, (1999).

Prediction of the coding sequences of unidentified human genes. XIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.
Nagase T., Ishikawa, K., Suyama, M., Kikuno, R., Hirosawa, M., Miyajima, N., Tanaka, A., Kotani, H., Nomura N., and Ohara O.
DNA Res. 6, 63-70, (1999).

HUGE: a database for human large proteins identified by Kazusa cDNA sequencing project.
Suyama, M., Nagase T., and Ohara O.
Nucleic Acids Res. 27, 338-339, (1999).

Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.
Nagase T., Ishikawa K.-I., Suyama, M., Kikuno, R., Hirosawa, M., Miyajima, N., Tanaka, A., Kotani, H., Nomura N., and Ohara O.
DNA Res. 5, 355-364, (1998).

Prediction of the coding sequences of unidentidied human genes. XI. The complete sequences of 100 new cDNA clones from brain which code for large protein in vitro.
Nagase T., Ishikawa K.-I., Suyama, M., Kikuno, R., Miyajima, N., Tanaka, A., Kotani, H., Nomura N., and Ohara O.
DNA Res. 5, 277-286, (1998).

Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro.
Ishikawa K.-I., Nagase T., Suyama, M., Miyajima, N., Tanaka, A., Kotani, H., Nomura N., and Ohara O.
DNA Res. 5, 169-176, (1998).

Prediction of the coding sequences of unidentified human genes. IX. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro.
Nagase T., Ishikawa K.-I., Miyajima, N., Tanaka, A., Kotani, H., Nomura N., and Ohara O.
DNA Res. 5, 31-39, (1998).

Characterization of cDNA clones in size-fractionated cDNA libaries from human brain.
Seki, N., Ohira, M., Nagase T., Ishikawa K.-I., Miyajima, N., Nakajima, D., Nomura N., and Ohara O.
DNA Res. 4, 345-349, (1997).

Prediction of the coding sequences of unidentified human genes. VIII. 78 new cDNA clones from brain which code for large proteins in vitro.
Ishikawa K.-I., Nagase T., Nakajima, D., Seki, N., Ohira, M., Miyajima, N., Tanaka, A., Kotani, H., Nomura N., and Ohara O.
DNA Res. 4, 307-313, (1997).

[A new direction of comprehensive analysis of human cDNAs: complete sequencing of relatively long human cDNA clones which encode large proteins] (article in Japanese).
Ohara O., Nagase T., and Nomura N.
Tanpakushitsu Kakusan Koso 42(17 Suppl), 2851-2857, (1997).

Prediction of the coding sequences of unidentified human genes. VII. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro.
Nagase T., Ishikawa K.-I., Nakajima, D., Ohira, M., Seki, N., Miyajima, N., Tanaka, A., Kotani, H., Nomura N., and Ohara O.
DNA Res. 4, 141-150, (1997).

Construction and characterization of human brain cDNA libraries suitable for analysis of cDNA clones encoding relatively large proteins.
Ohara O., Nagase T., Ishikawa K.-I., Nakajima, D., Ohira, M., Seki, N., and Nomura N.
DNA Res. 4, 53-59, (1997).

Prediction of the coding sequences of unidentified human genes. VI. The coding sequences of 80 new genes (KIAA0201-KIAA0280) deduced by analysis of cDNA clones from cell line KG-1 and brain.
Nagase T., Seki, N., Ishikawa K.-I., Ohira, M., Kawarabayasi, Y., Ohara O., Tanaka, A., Kotani, H., Miyajima, N., and Nomura N.
DNA Res. 3, 321-329, (1996).

Prediction of the coding sequences of unidentified human genes. V. The coding sequences of 40 new genes (KIAA0161-KIAA0200) deduced by analysis of cDNA clones from human cell line KG-1 (supplement).
Nagase T., Seki, N., Ishikawa K.-I., Tanaka, A., and Nomura N.
DNA Res. 3, 43-53, (1996).

Prediction of the coding sequences of unidentified human genes. V. The coding sequences of 40 new genes (KIAA0161-KIAA0200) deduced by analysis of cDNA clones from human cell line KG-1.
Nagase T., Seki, N., Ishikawa K.-I., Tanaka, A., and Nomura N.
DNA Res. 3, 17-24, (1996).

Prediction of the coding sequences of unidentified human genes. IV. The coding sequences of 40 new genes (KIAA0121-KIAA0160) deduced by analysis of cDNA clones from human cell line KG-1 (supplement).
Nagase T., Seki, N., Tanaka, A., Ishikawa K.-I., and Nomura N.
DNA Res. 2, 199-210, (1995).

Prediction of the coding sequences of unidentified human genes. IV. The coding sequences of 40 new genes (KIAA0121-KIAA0160) deduced by analysis of cDNA clones from human cell line KG-1.
Nagase T., Seki, N., Tanaka, A., Ishikawa K.-I., and Nomura N.
DNA Res. 2, 167-174, (1995).

Prediction of the coding sequences of unidentified human genes. III. The coding sequences of 40 new genes (KIAA0081-KIAA0120) deduced by analysis of cDNA clones from human cell line KG-1 (supplement).
Nagase T., Miyajima, N., Tanaka, A., Sazuka, T., Seki, N., Sato, S., Tabata, S., Ishikawa K.-I., Kawarabayasi, Y., Kotani, H., and Nomura N.
DNA Res. 2, 51-59, (1995).

Prediction of the coding sequences of unidentified human genes. III. The coding sequences of 40 new genes (KIAA0081-KIAA0120) deduced by analysis of cDNA clones from human cell line KG-1.
Nagase T., Miyajima, N., Tanaka, A., Sazuka, T., Seki, N., Sato, S., Tabata, S., Ishikawa K.-I., Kawarabayasi, Y., Kotani, H., and Nomura N.
DNA Res. 2, 37-43, (1995).

Prediction of the coding sequences of unidentified human genes. II. The coding sequences of 40 new genes (KIAA0041-KIAA0080) deduced by analysis of cDNA clones from human cell line KG-1 (supplement).
Nomura N., Nagase T., Miyajima, N., Sazuka, T., Tanaka, A., Sato, S., Seki, N., Kawarabayasi, Y., Ishikawa, K., and Tabata, S.
DNA Res. 1, 251-262, (1994).

Prediction of the coding sequences of unidentified human genes. II. The coding sequences of 40 new genes (KIAA0041-KIAA0080) deduced by analysis of cDNA clones from human cell line KG-1.
Nomura N., Nagase T., Miyajima, N., Sazuka, T., Tanaka, A., Sato, S., Seki, N., Kawarabayasi, Y., Ishikawa, K., and Tabata, S.
DNA Res. 1, 223-229, (1994).

Prediction of the coding sequences of unidentified human genes. I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1 (supplement).
Nomura N., Miyajima, N., Sazuka, T., Tanaka, A., Kawarabayasi, Y., Sato, S., Nagase T., Seki, N., Ishikawa K.-I., and Tabata, S.
DNA Res. 1, 47-56, (1994).

Prediction of the coding sequences of unidentified human genes. I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1.
Nomura N., Miyajima, N., Sazuka, T., Tanaka, A., Kawarabayasi, Y., Sato, S., Nagase T., Seki, N., Ishikawa K.-I., and Tabata, S.
DNA Res. 1, 27-35, (1994).

How to obtain KIAA clone(s)
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