[UP]
BLASTX 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BB938238 RCC11466
(593 letters)
Database: uniref100
9,526,577 sequences; 3,332,566,763 total letters
Searching..................................................done
significant alignments:[graphical|details]
UniRef100_C6SXZ4 Putative uncharacterized protein n=1 Tax=Glycin... 120 8e-26
UniRef100_C6SVA4 Putative uncharacterized protein n=1 Tax=Glycin... 117 7e-25
UniRef100_B9N7D1 Predicted protein n=1 Tax=Populus trichocarpa R... 110 1e-22
UniRef100_B3TLL2 DNA-directed RNA polymerases II 24 kDa polypept... 107 5e-22
UniRef100_A7PEL2 Chromosome chr11 scaffold_13, whole genome shot... 107 9e-22
UniRef100_B4FU06 DNA-directed RNA polymerases II 24 kDa polypept... 102 2e-20
UniRef100_A9RWG5 Predicted protein n=1 Tax=Physcomitrella patens... 102 3e-20
UniRef100_O81098 RNA polymerase I, II and III 24.3 kDa subunit n... 101 5e-20
UniRef100_A9NTD1 Putative uncharacterized protein n=1 Tax=Picea ... 101 5e-20
UniRef100_A9RKG6 Predicted protein n=1 Tax=Physcomitrella patens... 99 2e-19
UniRef100_B8LR68 Putative uncharacterized protein n=1 Tax=Picea ... 97 7e-19
UniRef100_B9RKM1 DNA-directed RNA polymerase II, putative n=1 Ta... 96 2e-18
UniRef100_B9ETS9 Putative uncharacterized protein n=1 Tax=Oryza ... 95 5e-18
UniRef100_Q5VQW7 Os01g0805800 protein n=2 Tax=Oryza sativa RepID... 95 5e-18
UniRef100_A8J805 DNA-directed RNA polymerase II, 23 kDa polypept... 94 6e-18
UniRef100_UPI0000D9E960 PREDICTED: similar to DNA directed RNA p... 92 2e-17
UniRef100_Q4S3C9 Chromosome 1 SCAF14751, whole genome shotgun se... 92 4e-17
UniRef100_C3KI95 DNA-directed RNA polymerases I, II, and III sub... 92 4e-17
UniRef100_C1BIS3 DNA-directed RNA polymerase II 23 kDa polypepti... 92 4e-17
UniRef100_B5FX59 Putative DNA directed RNA polymerase II polypep... 91 5e-17
UniRef100_C1C3Q7 DNA-directed RNA polymerases I, II, and III sub... 91 5e-17
UniRef100_B5XGU7 DNA-directed RNA polymerases I, II, and III sub... 91 5e-17
UniRef100_B5X957 DNA-directed RNA polymerases I, II, and III sub... 91 5e-17
UniRef100_UPI000194DF40 PREDICTED: polymerase (RNA) II (DNA dire... 91 7e-17
UniRef100_UPI00005A3E0E PREDICTED: similar to DNA directed RNA p... 91 7e-17
UniRef100_UPI0000EB19D6 DNA-directed RNA polymerases I, II, and ... 91 7e-17
UniRef100_UPI00005A3E0F PREDICTED: similar to DNA-directed RNA p... 91 7e-17
UniRef100_Q6DEG5 Polymerase (RNA) II (DNA directed) polypeptide ... 91 7e-17
UniRef100_Q8R0H0 Polr2e protein n=1 Tax=Mus musculus RepID=Q8R0H... 91 7e-17
UniRef100_Q80UW8 DNA-directed RNA polymerases I, II, and III sub... 91 7e-17
UniRef100_Q28HF5 Polymerase (RNA) II (DNA directed) polypeptide ... 91 9e-17
UniRef100_C1BZT4 DNA-directed RNA polymerases I, II, and III sub... 90 1e-16
UniRef100_Q01A87 RNA polymerase I, II and III 24.3 kDa subunit (... 90 1e-16
UniRef100_B5X8S7 DNA-directed RNA polymerases I, II, and III sub... 90 2e-16
UniRef100_B4FGM1 Putative uncharacterized protein n=1 Tax=Zea ma... 90 2e-16
UniRef100_A4RWP8 Predicted protein n=1 Tax=Ostreococcus lucimari... 90 2e-16
UniRef100_Q5R587 DNA-directed RNA polymerases I, II, and III sub... 90 2e-16
UniRef100_A6N9W6 25-kDa subunit RNA polymerase n=1 Tax=Ornithodo... 89 3e-16
UniRef100_UPI000180C3C9 PREDICTED: similar to 25-kDa subunit RNA... 88 6e-16
UniRef100_UPI0000587A08 PREDICTED: similar to RPB5 n=1 Tax=Stron... 88 6e-16
UniRef100_P19388 DNA-directed RNA polymerases I, II, and III sub... 88 6e-16
UniRef100_C3ZQF0 Putative uncharacterized protein n=1 Tax=Branch... 87 8e-16
UniRef100_B7T1F2 RNA polymerase II (Fragment) n=1 Tax=Oreochromi... 87 1e-15
UniRef100_Q7XUF8 OJ991113_30.8 protein n=1 Tax=Oryza sativa Japo... 87 1e-15
UniRef100_B7EQI7 cDNA clone:J023098I05, full insert sequence n=1... 87 1e-15
UniRef100_A3AV22 Putative uncharacterized protein n=2 Tax=Oryza ... 87 1e-15
UniRef100_Q2T9T3 DNA-directed RNA polymerases I, II, and III sub... 87 1e-15
UniRef100_Q5DDM1 SJCHGC05306 protein n=1 Tax=Schistosoma japonic... 86 3e-15
UniRef100_B0X7A5 DNA-directed RNA polymerase II 23 kDa polypepti... 86 3e-15
UniRef100_UPI000056951D UPI000056951D related cluster n=1 Tax=Da... 85 4e-15
UniRef100_C4PZ68 DNA-directed RNA polymerase II, putative (Fragm... 85 4e-15
UniRef100_C1EDR8 Predicted protein n=1 Tax=Micromonas sp. RCC299... 85 5e-15
UniRef100_Q9N5K2 DNA-directed RNA polymerases I, II, and III sub... 85 5e-15
UniRef100_UPI000186E78B DNA-directed RNA polymerase II 23 kDa po... 84 6e-15
UniRef100_C6K8L9 RNA polymerase II B subunit n=1 Tax=Caenorhabdi... 84 8e-15
UniRef100_A8XGH1 C. briggsae CBR-RPB-5 protein n=1 Tax=Caenorhab... 84 8e-15
UniRef100_UPI0000D56A05 PREDICTED: similar to AGAP010064-PA n=1 ... 84 1e-14
UniRef100_C1MXV4 Predicted protein n=1 Tax=Micromonas pusilla CC... 84 1e-14
UniRef100_UPI000051A7F2 PREDICTED: similar to Rpb5 CG11979-PA n=... 83 1e-14
UniRef100_UPI00003C0CAC PREDICTED: similar to Rpb5 CG11979-PA n=... 83 1e-14
UniRef100_UPI00015B5456 PREDICTED: similar to ENSANGP00000006082... 83 2e-14
UniRef100_C1C1G9 DNA-directed RNA polymerases I, II, and III sub... 83 2e-14
UniRef100_B3S3Q9 Putative uncharacterized protein n=1 Tax=Tricho... 83 2e-14
UniRef100_C4WY48 ACYPI000388 protein n=1 Tax=Acyrthosiphon pisum... 82 2e-14
UniRef100_B4MK71 GK20665 n=1 Tax=Drosophila willistoni RepID=B4M... 81 7e-14
UniRef100_B4KPZ3 GI19761 n=2 Tax=Drosophila RepID=B4KPZ3_DROMO 81 7e-14
UniRef100_B4J892 GH20567 n=1 Tax=Drosophila grimshawi RepID=B4J8... 81 7e-14
UniRef100_B5DLL1 GA22602 n=2 Tax=pseudoobscura subgroup RepID=B5... 81 7e-14
UniRef100_Q7JZF5 Rpb5 n=5 Tax=melanogaster subgroup RepID=Q7JZF5... 81 7e-14
UniRef100_B3MEP0 GF12445 n=1 Tax=Drosophila ananassae RepID=B3ME... 81 7e-14
UniRef100_C1BRK0 DNA-directed RNA polymerases I, II, and III sub... 80 9e-14
UniRef100_UPI0000E24E5A PREDICTED: similar to Polymerase (RNA) I... 79 2e-13
UniRef100_B4GBQ3 GL10501 n=1 Tax=Drosophila persimilis RepID=B4G... 78 6e-13
UniRef100_B5E0K0 GA24393 n=1 Tax=Drosophila pseudoobscura pseudo... 77 1e-12
UniRef100_Q54EH2 DNA-directed RNA polymerases I, II, and III sub... 77 1e-12
UniRef100_Q98RN7 RNA polymerase I, II and III 24.3 kDa subunit n... 75 3e-12
UniRef100_A8QAC6 Putative uncharacterized protein n=1 Tax=Malass... 75 5e-12
UniRef100_Q9FJL8 RNA polymerase I, II and III 24.3 kDa subunit-l... 74 9e-12
UniRef100_B8C1Q1 RPB5,-like protein to RNA polymerase i n=1 Tax=... 73 1e-11
UniRef100_B5DLP1 GA22581 n=1 Tax=Drosophila pseudoobscura pseudo... 73 1e-11
UniRef100_B9IHS9 Predicted protein n=1 Tax=Populus trichocarpa R... 73 2e-11
UniRef100_Q8ID59 DNA-directed RNA polymerase 2, putative n=1 Tax... 73 2e-11
UniRef100_B3L6X3 DNA-directed RNA polymerase 2, putative n=1 Tax... 72 3e-11
UniRef100_A7RT72 Predicted protein n=1 Tax=Nematostella vectensi... 72 3e-11
UniRef100_C5KB88 DNA-directed RNA polymerases II 24 kDa polypept... 71 6e-11
UniRef100_C5KHW9 DNA-directed RNA polymerases II 24 kDa polypept... 71 7e-11
UniRef100_A5K2Q3 DNA-directed RNA polymerase II 23 kDa polypepti... 70 1e-10
UniRef100_B6KFE7 DNA-directed RNA polymerases I, II, and III sub... 70 1e-10
UniRef100_B7FSY0 Predicted protein n=1 Tax=Phaeodactylum tricorn... 70 2e-10
UniRef100_B6AE06 DNA-directed RNA polymerase 2, putative n=1 Tax... 70 2e-10
UniRef100_Q9M1J2 Putative uncharacterized protein F24I3.160 n=1 ... 68 5e-10
UniRef100_A9BK88 Rpabc5 n=1 Tax=Cryptophyta RepID=A9BK88_9CRYP 68 5e-10
UniRef100_A8NU15 Putative uncharacterized protein n=1 Tax=Coprin... 68 5e-10
UniRef100_Q9ZVB9 Putative DNA-directed RNA polymerase 23kD subun... 67 1e-09
UniRef100_Q8L947 Putative DNA-directed RNA polymerase 23kD subun... 67 1e-09
UniRef100_Q8CI23 Polymerase (RNA) II (DNA directed) polypeptide ... 66 2e-09
UniRef100_B4GWF6 GL16452 n=1 Tax=Drosophila persimilis RepID=B4G... 66 2e-09
UniRef100_B9ST46 DNA-directed RNA polymerase II, putative n=1 Ta... 66 2e-09
UniRef100_Q4YN15 DNA-directed RNA polymerase 2, putative (Fragme... 65 3e-09
UniRef100_Q9LKX4 RPB5d n=1 Tax=Brassica napus RepID=Q9LKX4_BRANA 64 7e-09
UniRef100_Q5CNJ4 DNA-directed RNA polymerase 2 n=2 Tax=Cryptospo... 64 9e-09
UniRef100_B5LZ31 RNA polymerase II (Fragment) n=1 Tax=Psetta max... 64 1e-08
UniRef100_B0D9Y7 Predicted protein n=1 Tax=Laccaria bicolor S238... 63 2e-08
UniRef100_Q757H7 DNA-directed RNA polymerases I, II, and III sub... 63 2e-08
UniRef100_Q4P7S7 Putative uncharacterized protein n=1 Tax=Ustila... 63 2e-08
UniRef100_A7QJL2 Chromosome chr8 scaffold_106, whole genome shot... 62 3e-08
UniRef100_A2Q2Z5 RNA polymerase subunit, RPB5; RNA polymerase Rp... 62 3e-08
UniRef100_A9UR01 Predicted protein n=1 Tax=Monosiga brevicollis ... 61 8e-08
UniRef100_A7APR4 RNA polymerase Rpb5, N-terminal domain containi... 60 2e-07
UniRef100_UPI0001985D3D PREDICTED: hypothetical protein n=1 Tax=... 59 2e-07
UniRef100_A7Q5P2 Chromosome undetermined scaffold_53, whole geno... 59 2e-07
UniRef100_C5DNB3 KLTH0G15598p n=1 Tax=Lachancea thermotolerans C... 59 3e-07
UniRef100_UPI00004E3EE0 RNA polymerase II core subunit n=1 Tax=D... 59 4e-07
UniRef100_Q9M1H8 RNA polymerase 24kDa subunit-like protein n=1 T... 58 5e-07
UniRef100_P20434 DNA-directed RNA polymerases I, II, and III sub... 58 5e-07
UniRef100_Q4N141 DNA-directed RNA polymerase II, putative n=1 Ta... 58 6e-07
UniRef100_C4YG42 DNA-directed RNA polymerases II 24 kDa polypept... 58 6e-07
UniRef100_A3GI06 DNA-directed RNA polymerases II 24 kDa polypept... 58 6e-07
UniRef100_Q6CJ62 DNA-directed RNA polymerases I, II, and III sub... 57 8e-07
UniRef100_Q2RAP1 Os11g0143400 protein n=1 Tax=Oryza sativa Japon... 57 1e-06
UniRef100_Q2QXY2 RNA polymerase Rpb5, N-terminal domain containi... 57 1e-06
UniRef100_Q0IQ77 Os12g0139500 protein n=2 Tax=Oryza sativa RepID... 57 1e-06
UniRef100_A2ZBC5 Putative uncharacterized protein n=1 Tax=Oryza ... 57 1e-06
UniRef100_B9W9S0 DNA-directed RNA polymerases I, II and III subu... 57 1e-06
UniRef100_UPI0001B7AB22 UPI0001B7AB22 related cluster n=1 Tax=Ra... 57 1e-06
UniRef100_C5Y4H1 Putative uncharacterized protein Sb05g002600 n=... 57 1e-06
UniRef100_C5DR69 ZYRO0B06006p n=1 Tax=Zygosaccharomyces rouxii C... 57 1e-06
UniRef100_Q9P4B9 DNA-directed RNA polymerases I, II, and III sub... 57 1e-06
UniRef100_C6SXN9 Putative uncharacterized protein n=1 Tax=Glycin... 56 2e-06
UniRef100_B6TJI5 DNA-directed RNA polymerase II 23 kDa polypepti... 56 2e-06
UniRef100_B4FYH9 Putative uncharacterized protein n=1 Tax=Zea ma... 56 2e-06
UniRef100_Q6FQA6 DNA-directed RNA polymerases I, II, and III sub... 56 2e-06
UniRef100_Q4U8E3 DNA-directed RNA polymerase, subunit (RPB5 homo... 55 3e-06
UniRef100_A7TEH4 Putative uncharacterized protein n=1 Tax=Vander... 55 5e-06
UniRef100_B0EA74 DNA-directed RNA polymerases I, II, and III sub... 54 7e-06
UniRef100_B6SJT2 DNA-directed RNA polymerase II 23 kDa polypepti... 54 9e-06
UniRef100_C4LW54 RNA polymerase subunit Rpb5, putative n=1 Tax=E... 54 9e-06
UniRef100_Q5KN51 DNA-directed RNA polymerases ii 24 kDa polypept... 54 9e-06
UniRef100_C5MBX4 DNA-directed RNA polymerases II 24 kDa polypept... 54 9e-06