BB938238 ( RCC11466 )

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[1][TOP]
>UniRef100_C6SXZ4 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6SXZ4_SOYBN
          Length = 206

 Score =  120 bits (301), Expect = 8e-26
 Identities = 55/119 (46%), Positives = 86/119 (72%)
 Frame = -3

Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
           MV  +E++ +LY+IR+T++QML DRN+ V D E++MS+ +FKS++GEH +RE L I K+ 
Sbjct: 1   MVLSEEEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60

Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNN 25
           KD+  +++ VFF DE K+GV  +K+ TNRM +EN  R ILV Q   +P A+T ++  ++
Sbjct: 61  KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISS 119

[2][TOP]
>UniRef100_C6SVA4 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6SVA4_SOYBN
          Length = 206

 Score =  117 bits (293), Expect = 7e-25
 Identities = 54/119 (45%), Positives = 85/119 (71%)
 Frame = -3

Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
           MV  +E++ +LY+IR+T++QML DR + V D E++MS+ +FKS++GEH +RE L I K+ 
Sbjct: 1   MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60

Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNN 25
           KD+  +++ VFF DE K+GV  +K+ TNRM +EN  R ILV Q   +P A+T ++  ++
Sbjct: 61  KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISS 119

[3][TOP]
>UniRef100_B9N7D1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N7D1_POPTR
          Length = 206

 Score =  110 bits (274), Expect = 1e-22
 Identities = 51/114 (44%), Positives = 81/114 (71%)
 Frame = -3

Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
           M   +E++ +L +IR+T++QML DR Y V D E+ M+R+ F+S++G + +RE L I KT 
Sbjct: 1   MTLTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK 60

Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           ++D S+++ VFF +EAK+GV  +K+ TNRM +EN  R ILV Q+  +P A+T +
Sbjct: 61  RNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI 114

[4][TOP]
>UniRef100_B3TLL2 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Elaeis
           guineensis RepID=B3TLL2_ELAGV
          Length = 204

 Score =  107 bits (268), Expect = 5e-22
 Identities = 50/111 (45%), Positives = 79/111 (71%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
           ++D+++L++IRRT++QML DR Y V D E++M++  F  +FGE  +RE L I K  K+DP
Sbjct: 3   EDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKLQFLEKFGEGVKREDLVINKAKKNDP 62

Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
           ++++ VFF ++AK+GV  +K    RM  EN TRGILV Q+  +P A+ ++A
Sbjct: 63  ADQIYVFFPNDAKVGVKQIKQYVERMKAENVTRGILVVQQALTPFARQSLA 113

[5][TOP]
>UniRef100_A7PEL2 Chromosome chr11 scaffold_13, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7PEL2_VITVI
          Length = 206

 Score =  107 bits (266), Expect = 9e-22
 Identities = 50/114 (43%), Positives = 80/114 (70%)
 Frame = -3

Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
           M   +E++++L++IR+T++QML DR Y V D E++M++  F S+FGE+ +RE L I K  
Sbjct: 1   MSASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAK 60

Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           + D S+++ VFF +E K+GV  +K+ TNRM +EN  R ILV Q+  +P A+T +
Sbjct: 61  RTDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI 114

[6][TOP]
>UniRef100_B4FU06 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Zea mays
           RepID=B4FU06_MAIZE
          Length = 210

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/112 (46%), Positives = 75/112 (66%)
 Frame = -3

Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
           +V D+  V +LY+IRRT++QML DR Y V D EL+ SR+DF  +FGE F RE L I K  
Sbjct: 5   LVTDEATVGRLYRIRRTVMQMLRDRGYLVVDHELATSRRDFLRKFGESFHREDLLINKYK 64

Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKT 46
           K+DPS+++ VFF ++ K+G+  +K     M  EN +R +LV Q+  +P AK+
Sbjct: 65  KNDPSDQIYVFFPNDDKVGMKHIKKYVEMMTHENVSRAVLVLQQNLTPFAKS 116

[7][TOP]
>UniRef100_A9RWG5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RWG5_PHYPA
          Length = 208

 Score =  102 bits (253), Expect = 3e-20
 Identities = 48/111 (43%), Positives = 78/111 (70%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
           DE   +LY+IR+T+++ML DR+Y V+D EL++S++ F+ ++G+  +RE L IQK  + + 
Sbjct: 7   DEQSARLYRIRKTVMEMLRDRDYVVADYELTLSKEQFREKYGDEPKREDLVIQKPRRSNN 66

Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
           +E + VFF +EAK+GV  +K+  +RM TEN  R ILV Q+  +P A+  V+
Sbjct: 67  AEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVS 117

[8][TOP]
>UniRef100_O81098 RNA polymerase I, II and III 24.3 kDa subunit n=1 Tax=Arabidopsis
           thaliana RepID=O81098_ARATH
          Length = 205

 Score =  101 bits (251), Expect = 5e-20
 Identities = 46/115 (40%), Positives = 82/115 (71%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
           +E++ +LY+I++T++QML DR Y ++D+EL+M+++ F  + G++ +RE L   K  ++D 
Sbjct: 4   EEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRNDN 63

Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNN 25
           S+++ +FF DEAK+GV  +K  TNRM +EN  R ILV Q+  +P A+T ++  ++
Sbjct: 64  SDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISS 118

[9][TOP]
>UniRef100_A9NTD1 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=A9NTD1_PICSI
          Length = 191

 Score =  101 bits (251), Expect = 5e-20
 Identities = 50/114 (43%), Positives = 76/114 (66%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
           DE   KL++IRRT+LQML DR+Y V D E++ +++ F  +FGE  ++E L I K  ++ P
Sbjct: 4   DEQTNKLFRIRRTVLQMLNDRDYLVGDFEINTTKEQFLDKFGEDPKKEDLVINKAKRNSP 63

Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFN 28
           SE++ VFF +EAK+GV  +K+   RM +E   R ILV Q+  +P A+ +V  F+
Sbjct: 64  SEQIFVFFPEEAKVGVKSIKTYVERMKSEGVFRAILVVQQALTPFARQSVQEFS 117

[10][TOP]
>UniRef100_A9RKG6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RKG6_PHYPA
          Length = 208

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 46/115 (40%), Positives = 80/115 (69%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
           DE   +LY+IR+T+++ML DR+Y V++ EL+ ++++F+ ++G+  +RE L IQK  + + 
Sbjct: 7   DEQCARLYRIRKTVMEMLRDRDYVVAEFELNSTKEEFREKYGDEPKREDLVIQKPKRSNN 66

Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNN 25
           +E + VFF +EAK+GV  +K+  +RM TEN  R ILV Q+  +P A+  V+  ++
Sbjct: 67  AEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVSEMSS 121

[11][TOP]
>UniRef100_B8LR68 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=B8LR68_PICSI
          Length = 194

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 48/103 (46%), Positives = 70/103 (67%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
           DE   KL++IRRT+LQML DR+Y V D E++ +++ F  +FGE  ++E L I K  ++ P
Sbjct: 4   DEQTNKLFRIRRTVLQMLNDRDYLVGDFEINTTKEQFLDKFGEDPKKEDLVINKAKRNSP 63

Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFS 61
           SE++ VFF +EAK+GV  +K+   RM +E   R ILV Q+ FS
Sbjct: 64  SEQIFVFFPEEAKVGVKSIKTYVERMKSEGVFRAILVVQQEFS 106

[12][TOP]
>UniRef100_B9RKM1 DNA-directed RNA polymerase II, putative n=1 Tax=Ricinus communis
           RepID=B9RKM1_RICCO
          Length = 225

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 48/134 (35%), Positives = 82/134 (61%), Gaps = 19/134 (14%)
 Frame = -3

Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
           M   ++++ +L++IRRT++QML DR Y V+D+E+++++  F S++G++ +RE L I K+ 
Sbjct: 1   MTLSEDEIKRLFRIRRTVMQMLKDRTYLVTDSEINITKHQFTSKYGDNMKREDLVIHKSK 60

Query: 201 KDD-------------------PSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILV 79
           +D                    P  ++ VFF +E K+GV  +K+ TNRM +EN  R ILV
Sbjct: 61  RDGSDSFYPTKLLFLNQLEAWLPLYQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV 120

Query: 78  CQKPFSPQAKTAVA 37
            Q+  +P A+T +A
Sbjct: 121 VQQSLTPFARTCIA 134

[13][TOP]
>UniRef100_B9ETS9 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
           Group RepID=B9ETS9_ORYSJ
          Length = 210

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 47/112 (41%), Positives = 74/112 (66%)
 Frame = -3

Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
           +V ++  V +L +IRRT++QML DR Y V + EL+M R+DF  ++GE F RE L I K  
Sbjct: 5   LVTEEVMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINKYK 64

Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKT 46
           K+DPS+++ VFF ++ K+G+  +K     M  EN +R +LV Q+  +P A++
Sbjct: 65  KNDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARS 116

[14][TOP]
>UniRef100_Q5VQW7 Os01g0805800 protein n=2 Tax=Oryza sativa RepID=Q5VQW7_ORYSJ
          Length = 210

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 47/112 (41%), Positives = 74/112 (66%)
 Frame = -3

Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
           +V ++  V +L +IRRT++QML DR Y V + EL+M R+DF  ++GE F RE L I K  
Sbjct: 5   LVTEEVMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINKYK 64

Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKT 46
           K+DPS+++ VFF ++ K+G+  +K     M  EN +R +LV Q+  +P A++
Sbjct: 65  KNDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARS 116

[15][TOP]
>UniRef100_A8J805 DNA-directed RNA polymerase II, 23 kDa polypeptide n=1
           Tax=Chlamydomonas reinhardtii RepID=A8J805_CHLRE
          Length = 206

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 45/109 (41%), Positives = 71/109 (65%)
 Frame = -3

Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187
           +++T+L+++RRT LQML DR Y VS  E+  ++  F+  FGE+ R++ L I    +DDP+
Sbjct: 2   DNLTRLWRVRRTCLQMLNDRGYLVSQEEIGTTKDQFRDRFGENPRKDDLTILVPRQDDPT 61

Query: 186 ERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           E++ VFF +E K+GV  +K +  RM  E   R I+V    F+P AK+A+
Sbjct: 62  EQIFVFFPEEQKVGVKTIKLLAERMKDEKVNRAIMVTPSKFTPFAKSAL 110

[16][TOP]
>UniRef100_UPI0000D9E960 PREDICTED: similar to DNA directed RNA polymerase II polypeptide E
           n=1 Tax=Macaca mulatta RepID=UPI0000D9E960
          Length = 278

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 45/116 (38%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+ED  +L+KIR+TI+Q+  DR Y V+  EL  + ++FK++FG+       RR  L +  
Sbjct: 3   DEEDTYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR ++V Q+  +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118

[17][TOP]
>UniRef100_Q4S3C9 Chromosome 1 SCAF14751, whole genome shotgun sequence n=1
           Tax=Tetraodon nigroviridis RepID=Q4S3C9_TETNG
          Length = 210

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  +  +FKS+FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR I+V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSL 118

[18][TOP]
>UniRef100_C3KI95 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
           Tax=Anoplopoma fimbria RepID=C3KI95_9PERC
          Length = 210

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  +  +FKS+FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR I+V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSL 118

[19][TOP]
>UniRef100_C1BIS3 DNA-directed RNA polymerase II 23 kDa polypeptide n=1 Tax=Osmerus
           mordax RepID=C1BIS3_OSMMO
          Length = 210

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  +  +FKS+FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR I+V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSL 118

[20][TOP]
>UniRef100_B5FX59 Putative DNA directed RNA polymerase II polypeptide E n=2
           Tax=Neognathae RepID=B5FX59_TAEGU
          Length = 210

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  + ++FK++FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR ++V Q+  +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSL 118

[21][TOP]
>UniRef100_C1C3Q7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
           Tax=Rana catesbeiana RepID=C1C3Q7_RANCA
          Length = 210

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 45/116 (38%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  +  +FK++FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKAQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR I+V Q+  +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQQGMTPSAKQSL 118

[22][TOP]
>UniRef100_B5XGU7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
           Tax=Salmo salar RepID=B5XGU7_SALSA
          Length = 159

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           DDE+  +L+KIR+TI+Q+  DR Y V+  EL  +  +FKS+FG+       RR  L +  
Sbjct: 3   DDEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR  +V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSL 118

[23][TOP]
>UniRef100_B5X957 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=2
           Tax=Euteleostei RepID=B5X957_SALSA
          Length = 210

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           DDE+  +L+KIR+TI+Q+  DR Y V+  EL  +  +FKS+FG+       RR  L +  
Sbjct: 3   DDEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR  +V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSL 118

[24][TOP]
>UniRef100_UPI000194DF40 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide E, 25kDa
           n=1 Tax=Taeniopygia guttata RepID=UPI000194DF40
          Length = 119

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 44/113 (38%), Positives = 71/113 (62%), Gaps = 5/113 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  + ++FK++FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAK 49
            H DDP++++ VFF +E K+G+  +K    RM  EN TR ++V Q+  +P AK
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAK 115

[25][TOP]
>UniRef100_UPI00005A3E0E PREDICTED: similar to DNA directed RNA polymerase II polypeptide E
           isoform 1 n=1 Tax=Canis lupus familiaris
           RepID=UPI00005A3E0E
          Length = 208

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  + ++FK++FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR ++V Q+  +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118

[26][TOP]
>UniRef100_UPI0000EB19D6 DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RNA
           polymerases I, II, and III subunit ABC1) (DNA-directed
           RNA polymerase II subunit E) (RPB5) (DNA-directed RNA
           polymerase II 23 kDa polypeptide) (XAP4). n=1 Tax=Canis
           lupus familiaris RepID=UPI0000EB19D6
          Length = 212

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  + ++FK++FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR ++V Q+  +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118

[27][TOP]
>UniRef100_UPI00005A3E0F PREDICTED: similar to DNA-directed RNA polymerase II 23 kDa
           polypeptide (RPB25) (RPB5) (RPABC1) isoform 2 n=1
           Tax=Canis lupus familiaris RepID=UPI00005A3E0F
          Length = 162

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  + ++FK++FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR ++V Q+  +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118

[28][TOP]
>UniRef100_Q6DEG5 Polymerase (RNA) II (DNA directed) polypeptide E n=1 Tax=Danio
           rerio RepID=Q6DEG5_DANRE
          Length = 210

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 45/116 (38%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  +  +F+S+FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFRSQFGDKPSEGRPRRNDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR I+V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSL 118

[29][TOP]
>UniRef100_Q8R0H0 Polr2e protein n=1 Tax=Mus musculus RepID=Q8R0H0_MOUSE
          Length = 162

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  + ++FK++FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR ++V Q+  +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118

[30][TOP]
>UniRef100_Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=3
           Tax=Murinae RepID=RPAB1_MOUSE
          Length = 210

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  + ++FK++FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR ++V Q+  +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118

[31][TOP]
>UniRef100_Q28HF5 Polymerase (RNA) II (DNA directed) polypeptide E n=2 Tax=Xenopus
           RepID=Q28HF5_XENTR
          Length = 210

 Score = 90.5 bits (223), Expect = 9e-17
 Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  +  +FK++FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKAQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR ++V Q+  +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSL 118

[32][TOP]
>UniRef100_C1BZT4 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
           Tax=Esox lucius RepID=C1BZT4_ESOLU
          Length = 210

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  +  +FKS+FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLA 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR  +V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSL 118

[33][TOP]
>UniRef100_Q01A87 RNA polymerase I, II and III 24.3 kDa subunit (ISS) n=1
            Tax=Ostreococcus tauri RepID=Q01A87_OSTTA
          Length = 1124

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 47/105 (44%), Positives = 63/105 (60%)
 Frame = -3

Query: 354  KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
            +L+++R+TI +MLA R Y VS  EL      F  EFGE  +R+ L I    KDDPSE + 
Sbjct: 927  RLFRVRKTIHKMLAARGYLVSARELERDADSFAEEFGEEPKRDSLTILAPRKDDPSENIF 986

Query: 174  VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            VFF DE K+GV  +K +  RM  EN  R I+V Q   +P AK ++
Sbjct: 987  VFFPDEEKVGVKTIKDLAKRMKEENVFRAIIVVQASLTPFAKQSL 1031

[34][TOP]
>UniRef100_B5X8S7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
           Tax=Salmo salar RepID=B5X8S7_SALSA
          Length = 210

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  +  +FKS+FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR  +V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSL 118

[35][TOP]
>UniRef100_B4FGM1 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=B4FGM1_MAIZE
          Length = 206

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/114 (37%), Positives = 70/114 (61%)
 Frame = -3

Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
           M   D+++++L++IRRT+ +ML DR Y V D ++ + R  F   +G   RR++L    T 
Sbjct: 1   MASPDDEISRLFRIRRTVYEMLRDRGYGVRDEQIKLERHKFIERYGNPVRRDELTFNATK 60

Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            + PS+++ VFF +EAK GV  +++   +M  EN   GILV Q+  S  A++AV
Sbjct: 61  LNGPSDQIYVFFPNEAKPGVKTIRNYVEKMKNENVFAGILVVQQALSAFARSAV 114

[36][TOP]
>UniRef100_A4RWP8 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4RWP8_OSTLU
          Length = 205

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 47/106 (44%), Positives = 64/106 (60%)
 Frame = -3

Query: 357 TKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERV 178
           T+L+++R+TI +MLA R Y VS  EL      F  +FGE  +RE L I    +DDPSE +
Sbjct: 7   TRLFRVRKTIHKMLAARGYLVSAKELERDIDSFTEDFGEEPKRESLTILAPKRDDPSENI 66

Query: 177 CVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            VFF DE K+GV  +K +  RM  EN  R I+V Q   +P AK ++
Sbjct: 67  FVFFPDEEKVGVKTIKDLAKRMKDENVFRAIIVVQASLTPFAKQSL 112

[37][TOP]
>UniRef100_Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
           Tax=Pongo abelii RepID=RPAB1_PONAB
          Length = 210

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  + ++F+++FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFRAQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR ++V Q+  +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118

[38][TOP]
>UniRef100_A6N9W6 25-kDa subunit RNA polymerase n=1 Tax=Ornithodoros parkeri
           RepID=A6N9W6_ORNPR
          Length = 210

 Score = 89.0 bits (219), Expect = 3e-16
 Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+ +  KL++IR+TI+Q+  DR Y V+  EL  +   FK +FG+        R  L +  
Sbjct: 3   DEAETYKLWRIRKTIMQLCHDRGYLVTQDELDQTLDQFKQQFGDKPSERRPARSDLIVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF DE K+G+  +K+   RM  EN TR I+V Q+  +P AK A+
Sbjct: 63  AHNDDPTDQMFVFFPDEPKIGIKTIKTYCQRMQEENITRAIIVVQQGMTPSAKQAL 118

[39][TOP]
>UniRef100_UPI000180C3C9 PREDICTED: similar to 25-kDa subunit RNA polymerase n=1 Tax=Ciona
           intestinalis RepID=UPI000180C3C9
          Length = 210

 Score = 87.8 bits (216), Expect = 6e-16
 Identities = 44/116 (37%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208
           D+ +  +L++IR+T++Q+  DR Y V+  EL  S ++FK EFG+        R+ L I  
Sbjct: 3   DEAETYRLWRIRKTVMQLCHDRGYLVTQHELDQSLEEFKEEFGDKPSERRPGRQDLTILV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+GV  +K+   RM  EN  R I+V Q+  +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGVKTIKTYCQRMQEENIQRAIIVVQQSMTPSAKQSL 118

[40][TOP]
>UniRef100_UPI0000587A08 PREDICTED: similar to RPB5 n=1 Tax=Strongylocentrotus purpuratus
           RepID=UPI0000587A08
          Length = 210

 Score = 87.8 bits (216), Expect = 6e-16
 Identities = 42/116 (36%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+ +  +L+++RRTI+Q+  DR Y V+  EL  + + FK +FG+        R+ L +  
Sbjct: 3   DEAETYRLWRVRRTIMQLCHDRGYLVTQEELDQTLEQFKEQFGDKPSENRPSRKDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K+   RM  EN TR I+  Q+  +P AKT++
Sbjct: 63  AHNDDPTDQMFVFFPEEKKVGMKTIKAYCQRMQEENITRAIITVQEKMTPSAKTSL 118

[41][TOP]
>UniRef100_P19388 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
           Tax=Homo sapiens RepID=RPAB1_HUMAN
          Length = 210

 Score = 87.8 bits (216), Expect = 6e-16
 Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  + ++FK++ G+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQSGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR ++V Q+  +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118

[42][TOP]
>UniRef100_C3ZQF0 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
           RepID=C3ZQF0_BRAFL
          Length = 210

 Score = 87.4 bits (215), Expect = 8e-16
 Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208
           D+++  KL++IR+TI+Q+  DR Y V+  EL      FK +FG+        R+ L +  
Sbjct: 3   DEQETYKLWRIRKTIMQLCHDRGYLVTQDELDQRLDQFKDQFGDKPSEGKPARKDLVVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF DE K+G+  +K    RM  EN +R I+V Q   +P AK A+
Sbjct: 63  AHNDDPTDQMFVFFADEPKIGIKTIKMYCQRMQEENISRAIIVVQMGMTPSAKQAL 118

[43][TOP]
>UniRef100_B7T1F2 RNA polymerase II (Fragment) n=1 Tax=Oreochromis niloticus
           RepID=B7T1F2_ORENI
          Length = 108

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/107 (41%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQKTHKDDP 190
           +L+KIR+TI+Q+  DR Y V+  EL  + ++FKS+FG+       RR  L +   H DDP
Sbjct: 1   RLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKSQFGDKPSEGRPRRTDLTVLVAHNDDP 60

Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAK 49
           ++++ VFF +E K+G+  +K    RM  EN TR I+V Q   +P AK
Sbjct: 61  TDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAK 107

[44][TOP]
>UniRef100_Q7XUF8 OJ991113_30.8 protein n=1 Tax=Oryza sativa Japonica Group
           RepID=Q7XUF8_ORYSJ
          Length = 205

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 42/110 (38%), Positives = 71/110 (64%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
           +E+ ++L++IRRT++QML DR Y V++ ++ + R DF + FG+   R+ L   +  KD+ 
Sbjct: 4   EEETSRLFRIRRTVMQMLRDRGYLVTELDIDLPRGDFVARFGDPVDRDHLVFSRHKKDNG 63

Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           ++++ VFF  +AK GV  ++S   RM  E+   GILV Q+  S  A++AV
Sbjct: 64  ADQIYVFFPKDAKPGVKTIRSYVERMKQESVFNGILVVQQALSAFARSAV 113

[45][TOP]
>UniRef100_B7EQI7 cDNA clone:J023098I05, full insert sequence n=1 Tax=Oryza sativa
           Japonica Group RepID=B7EQI7_ORYSJ
          Length = 167

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 42/110 (38%), Positives = 71/110 (64%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
           +E+ ++L++IRRT++QML DR Y V++ ++ + R DF + FG+   R+ L   +  KD+ 
Sbjct: 4   EEETSRLFRIRRTVMQMLRDRGYLVTELDIDLPRGDFVARFGDPVDRDHLVFSRHKKDNG 63

Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           ++++ VFF  +AK GV  ++S   RM  E+   GILV Q+  S  A++AV
Sbjct: 64  ADQIYVFFPKDAKPGVKTIRSYVERMKQESVFNGILVVQQALSAFARSAV 113

[46][TOP]
>UniRef100_A3AV22 Putative uncharacterized protein n=2 Tax=Oryza sativa
           RepID=A3AV22_ORYSJ
          Length = 217

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 42/110 (38%), Positives = 71/110 (64%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
           +E+ ++L++IRRT++QML DR Y V++ ++ + R DF + FG+   R+ L   +  KD+ 
Sbjct: 4   EEETSRLFRIRRTVMQMLRDRGYLVTELDIDLPRGDFVARFGDPVDRDHLVFSRHKKDNG 63

Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           ++++ VFF  +AK GV  ++S   RM  E+   GILV Q+  S  A++AV
Sbjct: 64  ADQIYVFFPKDAKPGVKTIRSYVERMKQESVFNGILVVQQALSAFARSAV 113

[47][TOP]
>UniRef100_Q2T9T3 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
           Tax=Bos taurus RepID=RPAB1_BOVIN
          Length = 210

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+   L  + ++FK++FG        RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDGLDQTLEEFKAQFGGKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  EN TR ++V Q+  +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118

[48][TOP]
>UniRef100_Q5DDM1 SJCHGC05306 protein n=1 Tax=Schistosoma japonicum
           RepID=Q5DDM1_SCHJA
          Length = 206

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
 Frame = -3

Query: 378 VFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHK 199
           + DD +  KL++IR+TIL+M  DR Y V   EL  S +DFK+  G+   R+ L +   H+
Sbjct: 1   MLDDSETYKLWRIRKTILKMCKDRGYLVMPKELEQSLEDFKATVGDPPARKDLLMVVNHE 60

Query: 198 DDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQ-KPFSPQAKTAVA 37
           +DP++ + VFF +E K+ +  V++  N+M  ++  R ILV Q K  +P AKTA+A
Sbjct: 61  EDPADMLYVFFPEEEKVNMKTVRAYLNQMQQDSTYRAILVLQEKGLTPSAKTAIA 115

[49][TOP]
>UniRef100_B0X7A5 DNA-directed RNA polymerase II 23 kDa polypeptide n=3 Tax=Culicidae
           RepID=B0X7A5_CULQU
          Length = 210

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           DD +  KL++IR+T++Q+  DR Y V+  EL  + + FK +FG+        R  L +  
Sbjct: 3   DDAETYKLWRIRKTVMQLSHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF DE K+G+  +K+   RM  EN  R I+V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPDEPKIGIKTIKTYCTRMQEENIHRAIVVVQAGMTPSAKQSL 118

[50][TOP]
>UniRef100_UPI000056951D UPI000056951D related cluster n=1 Tax=Danio rerio
           RepID=UPI000056951D
          Length = 211

 Score = 85.1 bits (209), Expect = 4e-15
 Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+T++Q+  DR Y V+  EL  +  +FK +FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTVMQLCHDRGYLVTQDELDQTLDEFKIQFGDRPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFF-FDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF  +E K+G+  +K    RM  EN TR ++V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPVEELKVGIKTIKMYCQRMQEENITRAVIVVQTGMTPSAKQSL 119

[51][TOP]
>UniRef100_C4PZ68 DNA-directed RNA polymerase II, putative (Fragment) n=1
           Tax=Schistosoma mansoni RepID=C4PZ68_SCHMA
          Length = 208

 Score = 85.1 bits (209), Expect = 4e-15
 Identities = 46/113 (40%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193
           DD +  KL++IR+TIL+M  DR Y V   EL  S +DFK+  G+   R+ L +   H++D
Sbjct: 5   DDSETYKLWRIRKTILKMCKDRGYLVMPKELEQSLEDFKATVGDPPTRKDLLMVVNHEED 64

Query: 192 PSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQ-KPFSPQAKTAVA 37
           P++ + VFF +E K+ +  V++  N+M  ++  R ILV Q K  +P AKTA+A
Sbjct: 65  PADMLYVFFPEEEKVNMKTVRAYLNQMQQDSTYRAILVLQEKGLTPSAKTAIA 117

[52][TOP]
>UniRef100_C1EDR8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EDR8_9CHLO
          Length = 204

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 42/109 (38%), Positives = 65/109 (59%)
 Frame = -3

Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187
           E  T+L++IR+T+ +ML  R Y V+  EL   +  F  EFGE  RR+ L +Q   ++DP+
Sbjct: 3   EKKTRLFRIRKTVCKMLNARGYLVAQAELDRDKDSFTEEFGEDPRRDALTLQFDLREDPT 62

Query: 186 ERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           + + VFF DE K+GV  +K    RM  E   R I+V Q+  +P A+ ++
Sbjct: 63  QHIFVFFPDEEKVGVKTIKEYAKRMKDEQVNRAIIVVQQSLTPFARQSL 111

[53][TOP]
>UniRef100_Q9N5K2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
           Tax=Caenorhabditis elegans RepID=RPAB1_CAEEL
          Length = 211

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 42/119 (35%), Positives = 72/119 (60%), Gaps = 5/119 (4%)
 Frame = -3

Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLE 217
           M  D+ +  +L++IR+T+LQM+ DR Y V+  EL    + FK ++G+        R  L 
Sbjct: 1   MADDELETYRLWRIRKTVLQMVHDRGYLVAQDELDQPLETFKVQYGDRPSEKKPARSDLT 60

Query: 216 IQKTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           I   H DDP++++ VFF ++AK+G+  +K+I  +M  +N +R I+V Q   +P AK ++
Sbjct: 61  ILVAHNDDPADQMFVFFPEDAKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSI 119

[54][TOP]
>UniRef100_UPI000186E78B DNA-directed RNA polymerase II 23 kDa polypeptide, putative n=1
           Tax=Pediculus humanus corporis RepID=UPI000186E78B
          Length = 210

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 41/117 (35%), Positives = 70/117 (59%), Gaps = 5/117 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208
           D+ +  KL++IR+T++Q+  DR Y V+  EL  + + FK +FG+        R  L +  
Sbjct: 3   DEAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKIPARSDLIVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
            H DDP++++ VFF D+ K+G+  +K+   RM  EN  R I+V Q+  +P AK +++
Sbjct: 63  AHNDDPTDQMFVFFPDDPKIGIKTIKTYCQRMQEENIHRAIIVVQQGMTPSAKQSLS 119

[55][TOP]
>UniRef100_C6K8L9 RNA polymerase II B subunit n=1 Tax=Caenorhabditis brenneri
           RepID=C6K8L9_CAEBE
          Length = 211

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 43/119 (36%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
 Frame = -3

Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLE 217
           M  D+ +  +L++IR+T+LQM+ DR Y V+  EL      FK  FG+        R  L 
Sbjct: 1   MADDELETYRLWRIRKTVLQMVHDRGYLVAQEELDQPLGHFKETFGDRPSEKKPARADLT 60

Query: 216 IQKTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           I   H DDP++++ VFF D+ K+G+  +K+I  +M  +N +R I+V Q   +P AK ++
Sbjct: 61  ILVAHNDDPADQMFVFFPDDTKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSI 119

[56][TOP]
>UniRef100_A8XGH1 C. briggsae CBR-RPB-5 protein n=1 Tax=Caenorhabditis briggsae
           RepID=A8XGH1_CAEBR
          Length = 211

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
 Frame = -3

Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLE 217
           M  D+ +  +L++IR+T+LQM+ DR Y V+  EL    + FK  FG+        R  L 
Sbjct: 1   MADDELETYRLWRIRKTVLQMVHDRGYLVAQEELDQPLETFKETFGDRPSEKKPARSDLT 60

Query: 216 IQKTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           I   H DDP++++ VFF ++ K+G+  +K+I  +M  +N +R I+V Q   +P AK ++
Sbjct: 61  ILVAHNDDPADQMFVFFPEDTKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSI 119

[57][TOP]
>UniRef100_UPI0000D56A05 PREDICTED: similar to AGAP010064-PA n=1 Tax=Tribolium castaneum
           RepID=UPI0000D56A05
          Length = 210

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+ +  KL++IR+T++Q+  DR Y V+  EL  + + FK + G+        R  L I  
Sbjct: 3   DEAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQCGDKPSEKRPSRNDLTILV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF DE K+G+  +K+   RM  EN  R I+V Q+  +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPDEPKIGIKAIKTYCQRMQDENIHRAIIVVQQGMTPSAKQSL 118

[58][TOP]
>UniRef100_C1MXV4 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1MXV4_9CHLO
          Length = 206

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 42/109 (38%), Positives = 63/109 (57%)
 Frame = -3

Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187
           E VTKL++I +T+ +ML  R Y V   EL   +  F+  +G+  +RE L +    +DDPS
Sbjct: 5   EKVTKLFRIHKTVHKMLNARGYLVQQKELERDKDSFREAYGDDPKRESLTLMLPRRDDPS 64

Query: 186 ERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           E + VFF +E K+GV  +K    RM  E+  R I+V Q   +P AK ++
Sbjct: 65  ENIFVFFPEEEKVGVKTIKEYAKRMKDESVFRAIIVVQASLTPFAKQSL 113

[59][TOP]
>UniRef100_UPI000051A7F2 PREDICTED: similar to Rpb5 CG11979-PA n=1 Tax=Apis mellifera
           RepID=UPI000051A7F2
          Length = 179

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+ +  KL++IR+T++Q+  DR Y V+  EL  + + FK +FG+        R  L +  
Sbjct: 3   DEAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF DE K+G+  +K+   RM  E   R I+V Q+  +P AK ++
Sbjct: 63  AHNDDPTDQLFVFFPDEPKIGIKTIKTYCQRMQEEKIHRAIIVVQQGMTPSAKQSL 118

[60][TOP]
>UniRef100_UPI00003C0CAC PREDICTED: similar to Rpb5 CG11979-PA n=1 Tax=Apis mellifera
           RepID=UPI00003C0CAC
          Length = 210

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+ +  KL++IR+T++Q+  DR Y V+  EL  + + FK +FG+        R  L +  
Sbjct: 3   DEAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF DE K+G+  +K+   RM  E   R I+V Q+  +P AK ++
Sbjct: 63  AHNDDPTDQLFVFFPDEPKIGIKTIKTYCQRMQEEKIHRAIIVVQQGMTPSAKQSL 118

[61][TOP]
>UniRef100_UPI00015B5456 PREDICTED: similar to ENSANGP00000006082 n=1 Tax=Nasonia
           vitripennis RepID=UPI00015B5456
          Length = 210

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+ +  KL++IR+T++Q+  DR Y V+  EL  + + FK +FG+        R  L +  
Sbjct: 3   DEAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF DE K+G+  +K+   RM  E   R I+V Q   +P AK ++
Sbjct: 63  AHNDDPTDQLFVFFPDEPKIGIKTIKTYCQRMQEEKIHRAIIVVQSGMTPSAKQSL 118

[62][TOP]
>UniRef100_C1C1G9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
           Tax=Caligus clemensi RepID=C1C1G9_9MAXI
          Length = 210

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 41/116 (35%), Positives = 69/116 (59%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQ-----LEIQK 208
           D+ +  KL+K+R+T++ +  DR Y V+  EL  ++  FK +FG+    +Q     L I  
Sbjct: 3   DESETYKLWKVRKTVMSLCHDRGYLVTQDELDQTQDQFKVQFGDKPSEKQPSRNDLTILV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF ++ K+GV  +++   RM  EN TR I+V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEDPKIGVKHIRTYCKRMQEENITRAIIVVQAGMTPSAKQSL 118

[63][TOP]
>UniRef100_B3S3Q9 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
           RepID=B3S3Q9_TRIAD
          Length = 210

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 49/135 (36%), Positives = 73/135 (54%), Gaps = 11/135 (8%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMS----RKDFKSEFGEHFR-REQLEIQK 208
           D+E+  KL++IR+T++QM  DR Y VS  EL  +     + F SE  E  + R  L +  
Sbjct: 3   DEEEAYKLWRIRKTVMQMCHDRGYMVSQEELDQTFDQFHEQFYSEMSESSQVRGLLSMLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA--- 37
            H DDP+E++ VFF DE K+G+  +K    RM  EN  R I++ Q   +P AK ++    
Sbjct: 63  HHIDDPTEQLFVFFPDEPKVGINTIKKYCQRMQRENINRAIIIIQSGMTPTAKQSLIDMA 122

Query: 36  ---TFNNFSASRLEV 1
              T  +F  S L +
Sbjct: 123 PKYTLESFMESELMI 137

[64][TOP]
>UniRef100_C4WY48 ACYPI000388 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WY48_ACYPI
          Length = 210

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
 Frame = -3

Query: 372 DDE-DVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQ 211
           DDE +  KL++IR+T++Q+  DR Y V+  EL  + + FK +FG+        R  L + 
Sbjct: 2   DDECESYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPGRSDLIVL 61

Query: 210 KTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
             H DDP++++ VFF +E K+G+  +K+   RM  E  TR I+V Q+  +P AK ++
Sbjct: 62  VAHNDDPTDQMFVFFPEEPKIGIKTIKTYCQRMQEETITRAIIVVQQGMTPSAKQSL 118

[65][TOP]
>UniRef100_B4MK71 GK20665 n=1 Tax=Drosophila willistoni RepID=B4MK71_DROWI
          Length = 210

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+ +  KL++IR+TI+Q+  DR Y V+  EL  + + FK  FG+        R  L +  
Sbjct: 3   DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K+   RM  EN  R I+V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118

[66][TOP]
>UniRef100_B4KPZ3 GI19761 n=2 Tax=Drosophila RepID=B4KPZ3_DROMO
          Length = 210

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+ +  KL++IR+TI+Q+  DR Y V+  EL  + + FK  FG+        R  L +  
Sbjct: 3   DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSDKRPSRSDLIVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K+   RM  EN  R I+V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118

[67][TOP]
>UniRef100_B4J892 GH20567 n=1 Tax=Drosophila grimshawi RepID=B4J892_DROGR
          Length = 210

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+ +  KL++IR+TI+Q+  DR Y V+  EL  + + FK  FG+        R  L +  
Sbjct: 3   DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSDKRPARSDLIVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K+   RM  EN  R I+V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118

[68][TOP]
>UniRef100_B5DLL1 GA22602 n=2 Tax=pseudoobscura subgroup RepID=B5DLL1_DROPS
          Length = 210

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+ +  KL++IR+TI+Q+  DR Y V+  EL  + + FK  FG+        R  L +  
Sbjct: 3   DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKDMFGDKPSEKRPARSDLIVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K+   RM  EN  R I+V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118

[69][TOP]
>UniRef100_Q7JZF5 Rpb5 n=5 Tax=melanogaster subgroup RepID=Q7JZF5_DROME
          Length = 210

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+ +  KL++IR+TI+Q+  DR Y V+  EL  + + FK  FG+        R  L +  
Sbjct: 3   DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K+   RM  EN  R I+V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118

[70][TOP]
>UniRef100_B3MEP0 GF12445 n=1 Tax=Drosophila ananassae RepID=B3MEP0_DROAN
          Length = 210

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+ +  KL++IR+TI+Q+  DR Y V+  EL  + + FK  FG+        R  L +  
Sbjct: 3   DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPSRSDLIVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K+   RM  EN  R I+V Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118

[71][TOP]
>UniRef100_C1BRK0 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
           Tax=Caligus rogercresseyi RepID=C1BRK0_9MAXI
          Length = 210

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQ-----LEIQK 208
           D+ +  KL+K+R+T++ +  DR Y V+  EL  +   FK +FG+    +Q     L I  
Sbjct: 3   DEAENYKLWKVRKTVMSLCHDRGYLVTQDELDQTLDQFKVQFGDKPSEKQPSRNDLTILV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF D+ K+G+  +++   RM  EN TR I++ Q   +P AK ++
Sbjct: 63  AHNDDPTDQMFVFFPDDPKIGIKHIRTYCKRMQEENITRAIILVQSGMTPSAKQSL 118

[72][TOP]
>UniRef100_UPI0000E24E5A PREDICTED: similar to Polymerase (RNA) II (DNA directed)
           polypeptide E, 25kDa n=1 Tax=Pan troglodytes
           RepID=UPI0000E24E5A
          Length = 230

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 39/105 (37%), Positives = 64/105 (60%), Gaps = 5/105 (4%)
 Frame = -3

Query: 339 RRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQKTHKDDPSERVC 175
           R+TI+Q+  DR Y V+  EL  + ++FK++FG+       RR  L +   H DDP++++ 
Sbjct: 34  RKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMF 93

Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           VFF +E K+G+  +K    RM  EN TR ++V Q+  +P AK ++
Sbjct: 94  VFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 138

[73][TOP]
>UniRef100_B4GBQ3 GL10501 n=1 Tax=Drosophila persimilis RepID=B4GBQ3_DROPE
          Length = 210

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208
           D+E++ K+++IR+T+LQM  DR Y V+  EL  + + F+  FG+        R  + +  
Sbjct: 3   DEEELYKMWRIRKTVLQMCHDRGYLVTQEELDQTLQGFQEIFGDRPSENCPSRADITLLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF +E K+G+  +K    RM  E+  R I+V Q   +P A+ A+
Sbjct: 63  AHNDDPTDQMFVFFPEEPKVGIKDIKRYCLRMQEESIYRAIIVVQNSITPSARQAL 118

[74][TOP]
>UniRef100_B5E0K0 GA24393 n=1 Tax=Drosophila pseudoobscura pseudoobscura
           RepID=B5E0K0_DROPS
          Length = 210

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208
           D+E++ K+++IR+T+LQM  DR Y V+  EL  + + F+  FG+        R  + +  
Sbjct: 3   DEEELYKMWRIRKTVLQMCHDRGYLVTQEELDQTLQGFQEIFGDRPSENCPSRADITLLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            H DDP++++ VFF  E K+G+  +K    RM  E+  R I+V Q   +P A+ A+
Sbjct: 63  AHNDDPTDQMFVFFPQEPKVGIKDIKRYCLRMQEESIYRAIIVVQNSITPSARQAL 118

[75][TOP]
>UniRef100_Q54EH2 DNA-directed RNA polymerases I, II, and III subunit rpabc1 n=1
           Tax=Dictyostelium discoideum RepID=RPAB1_DICDI
          Length = 197

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/121 (37%), Positives = 66/121 (54%)
 Frame = -3

Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187
           ED+ +L +IR+T+LQML+DR Y ++  E    R+ F S       RE L +    KDDP+
Sbjct: 2   EDINRLLQIRKTVLQMLSDREYIITAYEQEYPRESFVS-------RENLTMYCVKKDDPT 54

Query: 186 ERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRL 7
           + + VFF D  K+GV  +K   + M      R I+V Q+  +P AK A+A F+      L
Sbjct: 55  DSIYVFFPDTPKVGVTQIKKYVDIMKDRQANRAIIVVQQNITPFAKQALAEFSQEKKITL 114

Query: 6   E 4
           E
Sbjct: 115 E 115

[76][TOP]
>UniRef100_Q98RN7 RNA polymerase I, II and III 24.3 kDa subunit n=1 Tax=Guillardia
           theta RepID=Q98RN7_GUITH
          Length = 214

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 40/124 (32%), Positives = 74/124 (59%), Gaps = 8/124 (6%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDT--ELSMSRKDFKSEFGEHFR--REQLEIQKT 205
           DD+++  L+K+RRT+LQM+ DR Y V D+  +L++SR  F+  + ++    R+ LEI++ 
Sbjct: 3   DDKNIQHLFKVRRTVLQMIRDRGYVVFDSKDDLNISRSSFEEFYMKNHAICRKSLEIKRP 62

Query: 204 HKDDPSERVCVFFF----DEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
             D+P  R+ + F     D+  +GV  ++    R+  E F+R +++     +P AK AV+
Sbjct: 63  RWDNPENRILIVFVEGEKDKMNIGVKSIRLFCERIKNEGFSRVLMILNGKLTPHAKQAVS 122

Query: 36  TFNN 25
           + N+
Sbjct: 123 SINS 126

[77][TOP]
>UniRef100_A8QAC6 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
           7966 RepID=A8QAC6_MALGO
          Length = 159

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEH--FRREQLEIQKTHK 199
           DD +  +L+++ RTI +++ADR Y VS+ EL++    FK+E   +    R ++     HK
Sbjct: 3   DDRETARLWRVNRTIHELVADRGYEVSEEELNVDLDTFKAEVTSNGIVDRNRMNFFTQHK 62

Query: 198 DDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           D P ER+ VF+  E  +GV  ++   N +  +N TRGI++     +  AK  +
Sbjct: 63  DKPEERLFVFYSTERNVGVKTMRQFINILEEKNITRGIIIWSDKMTSAAKKVI 115

[78][TOP]
>UniRef100_Q9FJL8 RNA polymerase I, II and III 24.3 kDa subunit-like protein n=1
           Tax=Arabidopsis thaliana RepID=Q9FJL8_ARATH
          Length = 210

 Score = 73.9 bits (180), Expect = 9e-12
 Identities = 36/118 (30%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE---HFRREQLEIQKTHK 199
           D+++T+++K+RRT+LQML DR Y++ +++L++ R++F   F +      +E L +     
Sbjct: 5   DDEITRIFKVRRTVLQMLRDRGYTIEESDLNLKREEFVQRFCKTMNKVNKEALFVSANKG 64

Query: 198 DDPSERVCVFFFDEAKLGVGVV-KSITNRMGTENFTRGILVCQKPFSPQAKTAVATFN 28
            +P++++ VF+ +  K+GV V+ K +  +M  +   RGI+V     +  A+ AV+  N
Sbjct: 65  PNPADKIYVFYPEGPKVGVPVIKKEVAIKMRDDKVHRGIVVVPMAITAPARMAVSELN 122

[79][TOP]
>UniRef100_B8C1Q1 RPB5,-like protein to RNA polymerase i n=1 Tax=Thalassiosira
           pseudonana CCMP1335 RepID=B8C1Q1_THAPS
          Length = 226

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 40/108 (37%), Positives = 63/108 (58%)
 Frame = -3

Query: 363 DVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSE 184
           + ++L+++ +T+  ML+ R Y VS     M+  DF   FGE+  RE L I     DD + 
Sbjct: 27  EASRLFRVYKTVSAMLSKRGYMVSREMREMTPFDFTQRFGEYPSREGLTILVEKADDETN 86

Query: 183 RVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           ++ VFF ++ K+GV  +K +T+RM  EN +  ILV +   +P AK AV
Sbjct: 87  QLFVFFPEDEKVGVKPIKILTDRMKDENVSNAILVLRGDITPFAKQAV 134

[80][TOP]
>UniRef100_B5DLP1 GA22581 n=1 Tax=Drosophila pseudoobscura pseudoobscura
           RepID=B5DLP1_DROPS
          Length = 320

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208
           D+ +V KL+ IR+T+ +M  DR Y V+  EL  + + F   FG+        R  L +  
Sbjct: 3   DEAEVYKLWHIRKTLFEMSHDRGYLVTSAELDQTVEQFTELFGDKPSEQSPMRSDLTMLL 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           +H DDP  R+ VFF +E K+ V  +K+  +RM  E   R ILV +   +P AK ++
Sbjct: 63  SHADDPKNRMLVFFPEEPKVAVKTIKAYAHRMEGEGIHRAILVVRDCLTPPAKQSI 118

[81][TOP]
>UniRef100_B9IHS9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IHS9_POPTR
          Length = 216

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 45/119 (37%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
 Frame = -3

Query: 375 FDDEDVT---KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKT 205
           F DE  T   + Y  RRT+L+ML DR YSV  +E+ +S +DF+  +G++   E L+   T
Sbjct: 11  FVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIELLKFSAT 70

Query: 204 HKDDPSERVCVFFFDEAKLGVGVVKSITNRM-GTENFTRGILVCQKPFSPQAKTAVATF 31
           HK DPS+R+ V F     + VG+++ IT ++   ++ T  ILV Q   + QA  A+  F
Sbjct: 71  HKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQAMKALDLF 129

[82][TOP]
>UniRef100_Q8ID59 DNA-directed RNA polymerase 2, putative n=1 Tax=Plasmodium
           falciparum 3D7 RepID=Q8ID59_PLAF7
          Length = 205

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
           ++ VT+ YK R+T  +ML DR Y ++  E   +   FK  F ++ R R ++ I  THK+D
Sbjct: 2   EDPVTRFYKCRKTCCEMLEDRGYIMTPREKLENFSTFKEMFEDNDRQRSKMGISTTHKND 61

Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            + R+ V+F DE  K GV  ++ +T RM  ++  R ILV Q   +P A+ A+
Sbjct: 62  SNNRIIVYFADEVKKTGVKPLRELTERMEEKSIQRAILVTQNILTPFARDAI 113

[83][TOP]
>UniRef100_B3L6X3 DNA-directed RNA polymerase 2, putative n=1 Tax=Plasmodium knowlesi
           strain H RepID=B3L6X3_PLAKH
          Length = 205

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 38/112 (33%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
           ++ +T+ YK R+T  +ML DR Y ++  E   +   FK +F E+ + R ++ I  +HK+D
Sbjct: 2   EDPITRFYKCRKTCCEMLEDRGYVITPREKLENFATFKEQFEENEKLRSRMTIITSHKND 61

Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            S ++ V+F DE  K GV  ++ +T +M  ++  R ILV Q   +P A+ A+
Sbjct: 62  ESNKIIVYFADETKKTGVKPLRELTEKMDEKSIQRAILVTQNTLTPFARDAI 113

[84][TOP]
>UniRef100_A7RT72 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RT72_NEMVE
          Length = 207

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
 Frame = -3

Query: 372 DDEDVT-KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQ 211
           DD D+T K ++IR+T++Q+    N  +   EL  + + FK +FG+        R  L I 
Sbjct: 2   DDTDLTYKFWRIRKTVMQVC---NGLILRDELDKTLEQFKEQFGDRPSEGRPSRSDLSIL 58

Query: 210 KTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
             H DDP++++ VFF +E K+G+  +K    RM  EN +R ++V Q   +P AK A+
Sbjct: 59  VAHNDDPTDQMFVFFPEEPKVGIKTIKQYCQRMQEENISRAVIVVQLGMTPSAKQAL 115

[85][TOP]
>UniRef100_C5KB88 DNA-directed RNA polymerases II 24 kDa polypeptide, putative n=1
           Tax=Perkinsus marinus ATCC 50983 RepID=C5KB88_9ALVE
          Length = 213

 Score = 71.2 bits (173), Expect = 6e-11
 Identities = 39/115 (33%), Positives = 71/115 (61%), Gaps = 5/115 (4%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRRE----QLEIQKTH 202
           D+   +L+++R+TI ++L DR Y V+   L+ +++ F  ++ E   R+     L I  + 
Sbjct: 7   DDTTIRLWRVRKTIFELLQDRGYVVAQKYLNETKESFAQQWNEIQERKGGRHDLIILVSK 66

Query: 201 KDDPSERVCVFFFDEAK-LGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           +DDPS+++ VFF DE K +GV  ++++  +M  +  +R ILV Q+P +  AKTA+
Sbjct: 67  QDDPSDQLIVFFPDENKRVGVKPIRTLALKMEEQRLSRAILVVQQPLTAFAKTAI 121

[86][TOP]
>UniRef100_C5KHW9 DNA-directed RNA polymerases II 24 kDa polypeptide, putative n=1
           Tax=Perkinsus marinus ATCC 50983 RepID=C5KHW9_9ALVE
          Length = 213

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 41/115 (35%), Positives = 73/115 (63%), Gaps = 6/115 (5%)
 Frame = -3

Query: 366 EDVT-KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRRE----QLEIQKTH 202
           +DVT +L+++R+TI ++L DR Y V+   L+ +++ F  ++ E   R+     L I  + 
Sbjct: 7   DDVTIRLWRVRKTIFELLQDRGYLVAQKYLNETKESFAQQWNEIQERKGGRHDLIILVSK 66

Query: 201 KDDPSERVCVFFFDEAK-LGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           +DDPS+++ VFF DE K +GV  ++++  +M  +  +R ILV Q+P +  AKTA+
Sbjct: 67  QDDPSDQLIVFFPDENKRVGVKPIRTLALKMEEQRLSRAILVVQQPLTAFAKTAI 121

[87][TOP]
>UniRef100_A5K2Q3 DNA-directed RNA polymerase II 23 kDa polypeptide, putative n=1
           Tax=Plasmodium vivax RepID=A5K2Q3_PLAVI
          Length = 205

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/112 (33%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
           ++ +T+ YK R+T  +ML DR Y ++  E   +   FK +F E+ + R ++ I  +HK+D
Sbjct: 2   EDPITRFYKCRKTCCEMLEDRGYIITPREKLENFATFKEQFEENEKLRSRMTIITSHKND 61

Query: 192 PSERVCVFFFDE-AKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            + ++ V+F DE  K GV  ++ +T +M  ++  R ILV Q   +P A+ A+
Sbjct: 62  ANNKIIVYFADEIKKTGVKPLRELTEKMDEKSIQRAILVTQNTLTPFARDAI 113

[88][TOP]
>UniRef100_B6KFE7 DNA-directed RNA polymerases I, II, and III subunit RPABC1,
           putative n=3 Tax=Toxoplasma gondii RepID=B6KFE7_TOXGO
          Length = 205

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEH-FRREQLEIQKTHKDD 193
           ++   +L++ R+T   ML DR Y VS  E + S  DF   F E+   R ++ +  +HK D
Sbjct: 2   EDSTRRLFRARKTCCDMLQDRGYIVSAQEKNESWNDFLQRFKENECNRSRMLLIASHKVD 61

Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA------T 34
           P  RV V+F DE  K GV  ++ +T RM   N  R ILV Q   +  A+ A++       
Sbjct: 62  PDNRVIVYFADETKKTGVKPIRELTERMEERNIQRAILVTQNVLTAFARDAISEAAPRHI 121

Query: 33  FNNFSASRLEV 1
             NF  S L V
Sbjct: 122 IENFMESELLV 132

[89][TOP]
>UniRef100_B7FSY0 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
           RepID=B7FSY0_PHATR
          Length = 228

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/108 (34%), Positives = 60/108 (55%)
 Frame = -3

Query: 363 DVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSE 184
           +  +L+++ RTI  ML  R Y V  T   ++   FK  FGE+  RE L I     DD + 
Sbjct: 29  EAARLFRVYRTIANMLDKRGYMVPKTLREITPSAFKERFGEYPSRENLTILVEKADDDTN 88

Query: 183 RVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           ++ +FF ++ K+GV  +K  T+RM  E+ +  I++ +   +P AK AV
Sbjct: 89  QLFIFFPEDEKVGVKPIKVYTDRMRAESVSNAIIILRVDITPFAKQAV 136

[90][TOP]
>UniRef100_B6AE06 DNA-directed RNA polymerase 2, putative n=1 Tax=Cryptosporidium
           muris RN66 RepID=B6AE06_9CRYT
          Length = 205

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
           D   T+ ++ RRT+ +ML DR Y VS  +       FK  F  H R R ++ +  +HK D
Sbjct: 2   DNSDTRFFRARRTLCEMLEDRGYIVSSQDKDEQFATFKERFESHQRLRSRMLMVASHKQD 61

Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            ++R+  +F DE+ K GV  ++ I  +M   N  R IL+ Q   +  AK A+
Sbjct: 62  QTKRIICYFADESKKTGVKPIRDIVEKMDEHNIQRAILISQNVLTAHAKVAI 113

[91][TOP]
>UniRef100_Q9M1J2 Putative uncharacterized protein F24I3.160 n=1 Tax=Arabidopsis
           thaliana RepID=Q9M1J2_ARATH
          Length = 222

 Score = 68.2 bits (165), Expect = 5e-10
 Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
 Frame = -3

Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187
           E+  + Y  RR  LQML DR Y VSD ++++S  DF++ +GE    ++L I   H+ D +
Sbjct: 23  EESHRYYLARRNGLQMLRDRGYEVSDEDINLSLHDFRTVYGERPDVDRLRISALHRSDST 82

Query: 186 ERVCVFFFDEAKLGVGVVKS-ITNRMGTENFTRGILVCQKPFSPQAKTAVATFN 28
           ++V + FF  + + V  ++S + + +  E  T  ILV Q   + QA  A+  F+
Sbjct: 83  KKVKIVFFGTSMVKVNAIRSVVADILSQETITGLILVLQNHVTNQALKAIELFS 136

[92][TOP]
>UniRef100_A9BK88 Rpabc5 n=1 Tax=Cryptophyta RepID=A9BK88_9CRYP
          Length = 216

 Score = 68.2 bits (165), Expect = 5e-10
 Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 8/127 (6%)
 Frame = -3

Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSV--SDTELSMSRKDFKSEFGEHFR--REQLEI 214
           M  D +++  L+KIRRTILQML DR+Y V  +  +L MSR  F+ +F ++F+  R +LEI
Sbjct: 1   METDYKEILNLFKIRRTILQMLRDRSYVVFENQDDLEMSRSSFEQKFVKNFQVIRSELEI 60

Query: 213 QKTHKDDPSERVCVFFFDEAK----LGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKT 46
            ++   + + R+ V F +  K    +GV  ++    R+  + F   I+V     +  AK 
Sbjct: 61  NRSKWLEENMRILVVFIEGEKEKSAIGVKSIRGFCERIKQDGFQNSIIVLHGKLTSHAKQ 120

Query: 45  AVATFNN 25
           A+ + N+
Sbjct: 121 AINSINS 127

[93][TOP]
>UniRef100_A8NU15 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
           okayama7#130 RepID=A8NU15_COPC7
          Length = 273

 Score = 68.2 bits (165), Expect = 5e-10
 Identities = 36/126 (28%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR---REQLEIQKTH 202
           D ++  +L+K+ +TI +++ DR +SVSD E++MS + F+  +G +     R QL     H
Sbjct: 68  DGDETARLWKVSKTIHELVKDRGFSVSDEEINMSLERFRQVYGNNMGVIDRNQLNFYTHH 127

Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNF 22
           + +PS+++ V+F +E  +GV  ++ +   M  +   RGI++     +  A+  ++     
Sbjct: 128 RLNPSDQIFVYFTEEPNVGVKAMRKLLGIMEEKAIQRGIIIFPATMTSSARKVISAM--A 185

Query: 21  SASRLE 4
           S  RLE
Sbjct: 186 STYRLE 191

[94][TOP]
>UniRef100_Q9ZVB9 Putative DNA-directed RNA polymerase 23kD subunit n=1
           Tax=Arabidopsis thaliana RepID=Q9ZVB9_ARATH
          Length = 218

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
           K Y  RRT ++ML DR Y VSD ++++S + F++ +GEH   + L I   H+ D S+++ 
Sbjct: 23  KYYLARRTTMEMLRDRGYDVSDEDINLSLQQFRALYGEHPDVDLLRISAKHRFDSSKKIS 82

Query: 174 VFFFDEAKLGVGVVKSITNR------MGTENFTRGILVCQKPFSPQAKTAVATFN 28
           V F      G G+VK    R      +  EN T  ILV Q   + QA  AV  F+
Sbjct: 83  VVF-----CGTGIVKVNAMRVIAADVLSRENITGLILVLQSHITNQALKAVELFS 132

[95][TOP]
>UniRef100_Q8L947 Putative DNA-directed RNA polymerase 23kD subunit n=1
           Tax=Arabidopsis thaliana RepID=Q8L947_ARATH
          Length = 222

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
 Frame = -3

Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187
           E+  + Y  RR  LQ+L DR Y VSD ++++S  DF++ +GE    ++L I   H+ D +
Sbjct: 23  EESHRYYLARRNGLQILRDRGYEVSDEDINLSLHDFRTVYGERPDVDRLRISALHRSDST 82

Query: 186 ERVCVFFFDEAKLGVGVVKS-ITNRMGTENFTRGILVCQKPFSPQAKTAVATFN 28
           ++V + FF  + + V  ++S + + +  E  T  ILV Q   + QA  A+  F+
Sbjct: 83  KKVKIVFFGTSMVKVNAIRSVVADILSQETITGLILVLQNHVTNQALKAIELFS 136

[96][TOP]
>UniRef100_Q8CI23 Polymerase (RNA) II (DNA directed) polypeptide E n=1 Tax=Mus
           musculus RepID=Q8CI23_MOUSE
          Length = 96

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+E+  +L+KIR+TI+Q+  DR Y V+  EL  + ++FK++FG+       RR  L +  
Sbjct: 3   DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKS 127
            H DDP++++ VFF  EA    GVV S
Sbjct: 63  AHNDDPTDQMFVFFPGEALGLAGVVSS 89

[97][TOP]
>UniRef100_B4GWF6 GL16452 n=1 Tax=Drosophila persimilis RepID=B4GWF6_DROPE
          Length = 126

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
           D+ ++ KL+ IR+T+ +M  DR Y V+  EL  + + F   FG+        R  L +  
Sbjct: 7   DEAEIYKLWHIRKTVFEMSHDRGYLVTQGELDQTVEQFTELFGDKPSEQRPMRSDLTMVL 66

Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVC 76
           TH DDP  R+ VFF +E K+ V  +K+  NRM    F  G  VC
Sbjct: 67  THADDPKNRMLVFFPEEPKVAVRTIKAFANRMRPRTFI-GPSVC 109

[98][TOP]
>UniRef100_B9ST46 DNA-directed RNA polymerase II, putative n=1 Tax=Ricinus communis
           RepID=B9ST46_RICCO
          Length = 238

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
           + Y  RRT+L+ML DR YSV  +E+ +S ++F++  G +   ++L+   TH  DPS+R+ 
Sbjct: 43  RYYLSRRTVLEMLRDRGYSVPSSEIDLSLQEFRAIHGPNPDIDRLKFSATHTSDPSKRML 102

Query: 174 VFFFDEAKLGVGVVKSITNR-MGTENFTRGILVCQKPFSPQAKTAVATF 31
           V F     + V  +++I  + +  ++ T  ILV Q   + QA  AV  F
Sbjct: 103 VLFGGPGIIKVSTIRAIAGQIVNKDSLTGLILVLQNQITNQAMKAVDLF 151

[99][TOP]
>UniRef100_Q4YN15 DNA-directed RNA polymerase 2, putative (Fragment) n=1
           Tax=Plasmodium berghei RepID=Q4YN15_PLABE
          Length = 107

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
           ++ VT+ YK R+T  +ML DR Y ++  E   +   FK  F E+ + R ++ I  +HK+D
Sbjct: 2   EDPVTRFYKCRKTCCEMLEDRGYIITAREKLENFAAFKELFEENEKLRSRMTIITSHKND 61

Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSP 58
            + ++ V+F DE  K GV  ++ +T +M  ++  R ILV Q   +P
Sbjct: 62  ANNKIIVYFVDEVKKTGVKPLRELTEKMDEKSIQRAILVTQNTLTP 107

[100][TOP]
>UniRef100_Q9LKX4 RPB5d n=1 Tax=Brassica napus RepID=Q9LKX4_BRANA
          Length = 223

 Score = 64.3 bits (155), Expect = 7e-09
 Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = -3

Query: 363 DVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSE 184
           D    Y  RRT ++ML DR Y +S+ +++++ ++F++ +G+    ++L I   H  D S+
Sbjct: 24  DSHSYYLARRTTMEMLRDRGYDISNEDINLTLQEFRALYGDRPNVDRLRISAQHCSDSSK 83

Query: 183 RVCVFFFDEAKLGVGVVKSI-TNRMGTENFTRGILVCQKPFSPQAKTAVATFN 28
           ++ V F     + V  ++ I  + +G EN T  ILV Q   + QA  AV  F+
Sbjct: 84  KIAVVFCGSGIVKVSAIRDIAADVLGRENLTGLILVLQSDITNQALKAVELFS 136

[101][TOP]
>UniRef100_Q5CNJ4 DNA-directed RNA polymerase 2 n=2 Tax=Cryptosporidium
           RepID=Q5CNJ4_CRYHO
          Length = 205

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
           D    + ++ RRT+ +ML DR Y VS  +       FK  F  H R R ++ +  +H+ D
Sbjct: 2   DSSDNRFFRARRTLCEMLEDRGYIVSSQDKEEDFSTFKERFESHQRLRSRMLMVASHRQD 61

Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            ++R+  +F DE+ K GV  ++ I  +M      R IL+ Q   +  AK A+
Sbjct: 62  QTKRIICYFADESKKTGVKPIRDIVEKMDEHAIQRAILISQNVLTAHAKVAI 113

[102][TOP]
>UniRef100_B5LZ31 RNA polymerase II (Fragment) n=1 Tax=Psetta maxima
           RepID=B5LZ31_PSEMX
          Length = 87

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
 Frame = -3

Query: 285 ELSMSRKDFKSEFGE-----HFRREQLEIQKTHKDDPSERVCVFFFDEAKLGVGVVKSIT 121
           EL  +  +FKS+FG+       RR  L +   H DDP++++ VFF +E K+G+  +K   
Sbjct: 3   ELDQTLDEFKSQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKMYC 62

Query: 120 NRMGTENFTRGILVCQKPFSPQAK 49
            RM  EN TR I+V Q   +P AK
Sbjct: 63  QRMQEENITRAIIVVQMGMTPSAK 86

[103][TOP]
>UniRef100_B0D9Y7 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
           RepID=B0D9Y7_LACBS
          Length = 208

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/114 (28%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEH---FRREQLEIQKTH 202
           D ++  KL+K+ RTI +++ DR + VSD E+ M  + F+S +  +     R QL    T 
Sbjct: 3   DVDETAKLWKVNRTIHELVKDRGFLVSDDEIHMDLQRFRSLYANNSGVVDRNQLNFYTTS 62

Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           + + ++++ VFF +E  +GV  ++ +   +  ++  RGI+V     +P A+  +
Sbjct: 63  RTNSTDQIFVFFSEEKSVGVKTMRKLLGILEEKSIQRGIIVFPGNMTPSARKVI 116

[104][TOP]
>UniRef100_Q757H7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
           Tax=Eremothecium gossypii RepID=RPAB1_ASHGO
          Length = 215

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 14/138 (10%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEI------- 214
           ++ +V++L++  RT+ +M+ DR Y ++  E+ +S +DFK+++ +   R Q ++       
Sbjct: 5   NERNVSRLWRAFRTVKEMVRDRGYFITQEEVDLSLEDFKAKYCDSMGRPQRKMMSFQSNP 64

Query: 213 -QKTHKDDPS-ERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQA---- 52
            ++T K  P+   V V F DE  +G+  +K+    +G +NF  GI + Q   +P A    
Sbjct: 65  TEETLKKSPNMGSVWVEFCDEPSVGIKTMKNFVIHIGEKNFQTGIFIYQNGITPSALKLL 124

Query: 51  -KTAVATFNNFSASRLEV 1
              A AT   F+ + L V
Sbjct: 125 PSVAPATIETFNETALVV 142

[105][TOP]
>UniRef100_Q4P7S7 Putative uncharacterized protein n=1 Tax=Ustilago maydis
           RepID=Q4P7S7_USTMA
          Length = 554

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 30/114 (26%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEF---GEHFRREQLEIQKTH 202
           DD +  +L+++ RTI +++ DR Y V+D E+S+  + FK+E+   G    R +L     H
Sbjct: 3   DDRETVRLWRVNRTIHELVRDRGYQVADDEISVDLETFKAEYAPTGGSVDRNKLNFFTEH 62

Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            +  ++R+ VF+  +  +GV  ++   + M   +  RGI++  +  +  A+  +
Sbjct: 63  GEHENQRLFVFYSSDRNVGVKTMRQFISIMEERDIQRGIIIWPEKMTSAARKVI 116

[106][TOP]
>UniRef100_A7QJL2 Chromosome chr8 scaffold_106, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7QJL2_VITVI
          Length = 229

 Score = 62.4 bits (150), Expect = 3e-08
 Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
           + Y  RRT+L+ML DR YS+   ++ +S +DF+S + +    ++L I    + DPS+++ 
Sbjct: 34  RYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLRISAALRSDPSKKIL 93

Query: 174 VFFFDEAKLGVGVVKSI-TNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRLEV 1
           V F     + V  ++SI T  +  ++ ++ ILV Q   + QA  AV  F +F   + ++
Sbjct: 94  VIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAVDLF-SFQVEKFQI 151

[107][TOP]
>UniRef100_A2Q2Z5 RNA polymerase subunit, RPB5; RNA polymerase Rpb5, N-terminal n=1
           Tax=Medicago truncatula RepID=A2Q2Z5_MEDTR
          Length = 248

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
           + Y  RRT+L+ML DR YS+   E+ +S  DF+   G+    ++L +  TH  +PS+R+ 
Sbjct: 53  RYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLRLTATHATNPSKRIL 112

Query: 174 VFFFDEAKLGVGVVKSITNR-MGTENFTRGILVCQKPFSPQAKTAV 40
           V F     + V  V+ I  + +  E+ T  IL+ Q   + QA  AV
Sbjct: 113 VVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKAV 158

[108][TOP]
>UniRef100_A9UR01 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UR01_MONBE
          Length = 210

 Score = 60.8 bits (146), Expect = 8e-08
 Identities = 34/112 (30%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRRE-QLEIQKTHKD 196
           D+ +  +LYK+  T+ QM  DR + V+   ++M+   +   +GE+ R+E    +QK   D
Sbjct: 3   DEAERYRLYKVWITLKQMCHDRGFRVTQEMMNMTFDTWNEIYGEYPRKELSFPVQKV--D 60

Query: 195 DPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           D ++ + VFF +   + V  +KS+ +R+ ++N  R I+V Q+  +P AK+ +
Sbjct: 61  DDNDGLFVFFPESPDVKVAAIKSLYDRLKSDNLRRAIIVYQRKVAPVAKSHI 112

[109][TOP]
>UniRef100_A7APR4 RNA polymerase Rpb5, N-terminal domain containing protein n=1
           Tax=Babesia bovis RepID=A7APR4_BABBO
          Length = 205

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
           D++  +L++ RRT  +ML DR Y + + E   +  +FK+ +  + R R ++ +  + K D
Sbjct: 2   DDEEGRLFRCRRTCCEMLEDRGYFIPNQERLETFAEFKARYELYDRVRSKMLLVASLKTD 61

Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
              ++ V+F DE  K GV  ++ +T +M   +  R ILV Q   +P AK A+
Sbjct: 62  KDAKLLVYFADETKKTGVKPIRELTEKMEDHDIHRAILVTQNVLTPFAKDAI 113

[110][TOP]
>UniRef100_UPI0001985D3D PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI0001985D3D
          Length = 1260

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 34/105 (32%), Positives = 55/105 (52%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
           + Y  RRT+ QML+DR Y+V  +EL+ S  DF++ FG +    +L I       PS+++ 
Sbjct: 27  RYYLSRRTLFQMLSDRGYNVPHSELTRSLSDFRASFGHNPDPSRLRICLPLISSPSKKIL 86

Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           V F    ++   V++ I  ++  E   R ILV Q   +  A+  V
Sbjct: 87  VVFCGTDEIRKAVIRVIFQQINREGLHRLILVLQSKMNSHARKVV 131

[111][TOP]
>UniRef100_A7Q5P2 Chromosome undetermined scaffold_53, whole genome shotgun sequence
           n=1 Tax=Vitis vinifera RepID=A7Q5P2_VITVI
          Length = 221

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 34/105 (32%), Positives = 55/105 (52%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
           + Y  RRT+ QML+DR Y+V  +EL+ S  DF++ FG +    +L I       PS+++ 
Sbjct: 27  RYYLSRRTLFQMLSDRGYNVPHSELTRSLSDFRASFGHNPDPSRLRICLPLISSPSKKIL 86

Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           V F    ++   V++ I  ++  E   R ILV Q   +  A+  V
Sbjct: 87  VVFCGTDEIRKAVIRVIFQQINREGLHRLILVLQSKMNSHARKVV 131

[112][TOP]
>UniRef100_C5DNB3 KLTH0G15598p n=1 Tax=Lachancea thermotolerans CBS 6340
           RepID=C5DNB3_LACTC
          Length = 215

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193
           ++ +V++L++  +T+ +M+ DR Y ++  E+ +S +DFK+++ +   R Q ++     + 
Sbjct: 5   NERNVSRLWRAFKTVKEMVRDRGYFITQEEVDLSLEDFKAKYCDSMGRPQRKMMSFQSNP 64

Query: 192 PSERVCVF---------FFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQA---- 52
             E +  F         F DEA +G+  +K+    +  +NF  GI V Q   +P A    
Sbjct: 65  VEEALEKFPNMGSLWVEFCDEASVGIKTMKNFVIHISEKNFQTGIFVYQNGVTPSAMKLL 124

Query: 51  -KTAVATFNNFSASRLEV 1
              A AT   F  + L V
Sbjct: 125 PSVAPATIETFHEASLVV 142

[113][TOP]
>UniRef100_UPI00004E3EE0 RNA polymerase II core subunit n=1 Tax=Dictyostelium discoideum AX4
           RepID=UPI00004E3EE0
          Length = 181

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 37/106 (34%), Positives = 53/106 (50%)
 Frame = -3

Query: 321 MLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVCVFFFDEAKLGV 142
           ML+DR Y ++  E    R+ F S       RE L +    KDDP++ + VFF D  K+GV
Sbjct: 1   MLSDREYIITAYEQEYPRESFVS-------RENLTMYCVKKDDPTDSIYVFFPDTPKVGV 53

Query: 141 GVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRLE 4
             +K   + M      R I+V Q+  +P AK A+A F+      LE
Sbjct: 54  TQIKKYVDIMKDRQANRAIIVVQQNITPFAKQALAEFSQEKKITLE 99

[114][TOP]
>UniRef100_Q9M1H8 RNA polymerase 24kDa subunit-like protein n=1 Tax=Arabidopsis
           thaliana RepID=Q9M1H8_ARATH
          Length = 233

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
           + Y  R T  +ML DR Y V++ ELS++  +F+S FGE    E+L I    + DP +++ 
Sbjct: 38  RFYLARTTAFEMLRDRGYEVNEAELSLTLSEFRSVFGEKPELERLRICVPLRSDPKKKIL 97

Query: 174 VFFFDEAKLGVGVVKS----ITNRMGTENFTRGILVCQKPFSPQAKTAVATF 31
           V F     + V  V++    I+N +G       ILV Q   +  A+ A+ TF
Sbjct: 98  VVFMGTEPITVKSVRALHIQISNNVGLHAM---ILVLQSKMNHFAQKALTTF 146

[115][TOP]
>UniRef100_P20434 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=5
           Tax=Saccharomyces cerevisiae RepID=RPAB1_YEAST
          Length = 215

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193
           ++ ++++L++  RT+ +M+ DR Y ++  E+ +  +DFK+++ +   R Q ++     + 
Sbjct: 5   NERNISRLWRAFRTVKEMVKDRGYFITQEEVELPLEDFKAKYCDSMGRPQRKMMSFQANP 64

Query: 192 PSERVCVF---------FFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
             E +  F         F DE  +GV  +K+    +  +NF  GI V Q   +P A   V
Sbjct: 65  TEESISKFPDMGSLWVEFCDEPSVGVKTMKTFVIHIQEKNFQTGIFVYQNNITPSAMKLV 124

Query: 39  -----ATFNNFSASRLEV 1
                AT   F+ + L V
Sbjct: 125 PSIPPATIETFNEAALVV 142

[116][TOP]
>UniRef100_Q4N141 DNA-directed RNA polymerase II, putative n=1 Tax=Theileria parva
           RepID=Q4N141_THEPA
          Length = 205

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
           D++  +L++ RRT  +ML DR Y +   E   +  +FK+ +  H + R ++ +  + +  
Sbjct: 2   DDEEGRLFRCRRTCCEMLEDRGYFIPVQEKLETFAEFKARYEMHEKVRSKMLLVASQRTA 61

Query: 192 PSERVCVFFFDE-AKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
              ++ V+F DE  K GV  ++ +T RM   +  R ILV Q   +P AK A+
Sbjct: 62  SENKLLVYFADEKKKTGVKPIRELTERMEDHDIHRAILVTQNVLTPFAKDAI 113

[117][TOP]
>UniRef100_C4YG42 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Candida
           albicans RepID=C4YG42_CANAL
          Length = 214

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 33/121 (27%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199
           D  V++L++  +T+ +M+ DR Y +S  EL M+ ++F+S+  +     +R+Q+  Q T  
Sbjct: 5   DRAVSRLFRSFKTVKEMVRDRGYYISQEELDMTLEEFRSKICDSMGTPQRKQMCFQATPT 64

Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
            +  E+      + V F DEA +G+  +++    +  +NF+ GI + Q   +P A   + 
Sbjct: 65  AETLEKFPETGSLWVEFCDEASVGIKTMRNFCIHITEKNFSTGIFIYQNSMTPSANKLIP 124

Query: 36  T 34
           T
Sbjct: 125 T 125

[118][TOP]
>UniRef100_A3GI06 DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase
           II subunit 5) n=1 Tax=Pichia stipitis RepID=A3GI06_PICST
          Length = 213

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193
           DD  V++L++  +T+ +M+ DR Y ++  E+ MS  +F+++  +   R Q ++     + 
Sbjct: 3   DDRTVSRLFRSFKTVKEMVRDRGYYITQEEVDMSLDEFRAKICDSMGRPQRKLMCFQANP 62

Query: 192 PSERVCVF---------FFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
            +E +  F         F DEA +G+  +++    +  +NF+ GI + Q   +P A   +
Sbjct: 63  TAESLDKFPDLGSLWVEFCDEASVGIKTMRNFCIHISEKNFSTGIFIYQNSITPSANKLI 122

Query: 39  AT 34
            T
Sbjct: 123 PT 124

[119][TOP]
>UniRef100_Q6CJ62 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
           Tax=Kluyveromyces lactis RepID=RPAB1_KLULA
          Length = 215

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 30/121 (24%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199
           + ++++L++  +T+ +M+ DR Y ++  E+ +S +DFK+++ +     +R+ +  Q    
Sbjct: 6   ERNISRLWRAFKTVKEMVRDRGYFITQEEIDLSLEDFKAKYCDSMGKPQRKMMSFQSNPT 65

Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
           ++  E+      + V F DEA +GV  +K+    +  +NF  GI + Q   +P A   + 
Sbjct: 66  EESIEKFPEMGSLWVEFCDEASVGVKTMKNFVVHITEKNFQTGIFIYQSGITPSANKILP 125

Query: 36  T 34
           T
Sbjct: 126 T 126

[120][TOP]
>UniRef100_Q2RAP1 Os11g0143400 protein n=1 Tax=Oryza sativa Japonica Group
           RepID=Q2RAP1_ORYSJ
          Length = 227

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 31/111 (27%), Positives = 58/111 (52%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
           +L+  RRT ++ML DR YSV + E++ +  +F++ + E    E+L    T   DPS++V 
Sbjct: 32  RLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLAFTTTLVSDPSKKVQ 91

Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNF 22
           + F     + +  ++ I  +   EN +R +L+ Q     +A+ A+     F
Sbjct: 92  LVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIKEIFKF 142

[121][TOP]
>UniRef100_Q2QXY2 RNA polymerase Rpb5, N-terminal domain containing protein,
           expressed n=1 Tax=Oryza sativa Japonica Group
           RepID=Q2QXY2_ORYSJ
          Length = 335

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 31/111 (27%), Positives = 58/111 (52%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
           +L+  RRT ++ML DR YSV + E++ +  +F++ + E    E+L    T   DPS++V 
Sbjct: 140 RLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLAFTTTLVSDPSKKVQ 199

Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNF 22
           + F     + +  ++ I  +   EN +R +L+ Q     +A+ A+     F
Sbjct: 200 LVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIKEIFKF 250

[122][TOP]
>UniRef100_Q0IQ77 Os12g0139500 protein n=2 Tax=Oryza sativa RepID=Q0IQ77_ORYSJ
          Length = 227

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 31/111 (27%), Positives = 58/111 (52%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
           +L+  RRT ++ML DR YSV + E++ +  +F++ + E    E+L    T   DPS++V 
Sbjct: 32  RLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLAFTTTLVSDPSKKVQ 91

Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNF 22
           + F     + +  ++ I  +   EN +R +L+ Q     +A+ A+     F
Sbjct: 92  LVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIKEIFKF 142

[123][TOP]
>UniRef100_A2ZBC5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
           RepID=A2ZBC5_ORYSI
          Length = 227

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 31/111 (27%), Positives = 58/111 (52%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
           +L+  RRT ++ML DR YSV + E++ +  +F++ + E    E+L    T   DPS++V 
Sbjct: 32  RLFLARRTAMEMLRDRGYSVPEAEIARTPPEFRAWWAEKPGIERLAFTTTLVSDPSKKVQ 91

Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNF 22
           + F     + +  ++ I  +   EN +R +L+ Q     +A+ A+     F
Sbjct: 92  LVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIKEIFKF 142

[124][TOP]
>UniRef100_B9W9S0 DNA-directed RNA polymerases I, II and III subunit, putative n=1
           Tax=Candida dubliniensis CD36 RepID=B9W9S0_CANDC
          Length = 214

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 32/121 (26%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199
           D  V++L++  +T+ +M+ DR Y +S  EL M+ ++F+S+  +     +R+Q+  Q T  
Sbjct: 5   DRAVSRLFRSFKTVKEMVRDRGYYISQEELDMTLEEFRSKICDSMGTPQRKQMCFQATPT 64

Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
            +  E+      + V F DE+ +G+  +++    +  +NF+ GI + Q   +P A   + 
Sbjct: 65  GETLEKFPETGSLWVEFCDESSVGIKTMRNFCIHITEKNFSTGIFIYQNSMTPSANKLIP 124

Query: 36  T 34
           T
Sbjct: 125 T 125

[125][TOP]
>UniRef100_UPI0001B7AB22 UPI0001B7AB22 related cluster n=1 Tax=Rattus norvegicus
           RepID=UPI0001B7AB22
          Length = 79

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQ--MLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEI 214
           D+E+  +L+KIR+TI+Q  +  DR Y V+  EL  + ++FK++FG+       RR  L +
Sbjct: 3   DEEETYRLWKIRKTIMQATLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV 62

Query: 213 QKTHKDDPSERVCVFF 166
              H DDP++++ VFF
Sbjct: 63  LVAHNDDPTDQMFVFF 78

[126][TOP]
>UniRef100_C5Y4H1 Putative uncharacterized protein Sb05g002600 n=1 Tax=Sorghum
           bicolor RepID=C5Y4H1_SORBI
          Length = 263

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 31/105 (29%), Positives = 56/105 (53%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
           +L+  RRT L+ML DR Y+V + EL+ +  +F++ + +    E+L    T   DPS +V 
Sbjct: 68  RLFLARRTALEMLRDRGYAVPEDELARTLPEFRAWWEDKPELERLAFSTTLASDPSSKVK 127

Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
           V F     + +  ++ +   +  EN +R IL+ Q     +A+ A+
Sbjct: 128 VVFCPPEPVKIAAIRVVYTGVKDENLSRLILILQGRIMSKAREAI 172

[127][TOP]
>UniRef100_C5DR69 ZYRO0B06006p n=1 Tax=Zygosaccharomyces rouxii CBS 732
           RepID=C5DR69_ZYGRC
          Length = 215

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 14/138 (10%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193
           ++ ++++L++  +T+ +M+ DR Y ++  E+ +  +DFK+++ +   R Q ++     + 
Sbjct: 5   NERNISRLWRTFKTVKEMVKDRGYFIAQEEIELPLEDFKAKYCDSMGRPQRKMMSFQSNP 64

Query: 192 PSERVCVF---------FFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
             E +  F         F DE  +GV  +K+    +  +NF  GI V Q   +P A   V
Sbjct: 65  TEESIAKFPSMGSLWVEFCDEPTVGVKTMKTFVIHIQEKNFQTGIFVYQNNVTPSAMKLV 124

Query: 39  -----ATFNNFSASRLEV 1
                AT   F  + L V
Sbjct: 125 PSIPPATIETFHEASLVV 142

[128][TOP]
>UniRef100_Q9P4B9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
           Tax=Kluyveromyces marxianus RepID=RPAB1_KLUMA
          Length = 215

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 31/121 (25%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199
           +  +++L++  RT+ +M+ DR Y ++  E+ +S +DFK ++ +     +R+ +  Q    
Sbjct: 6   ERGISRLWRAFRTVKEMVRDRGYFITQEEIDLSLEDFKVKYCDSMGKPQRKMMSFQSNPT 65

Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
           ++  E+      + V F DEA +GV  +K+    +  +NF  GI + Q   +P A   + 
Sbjct: 66  EESIEKFPEMGSLWVEFCDEASVGVKTMKNFVVHITEKNFQTGIFIYQSGITPSANKILP 125

Query: 36  T 34
           T
Sbjct: 126 T 126

[129][TOP]
>UniRef100_C6SXN9 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6SXN9_SOYBN
          Length = 237

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
           + Y  RRT L+ML DR YS+   E+ +S  DF+   G+    ++L +  TH  + S+R+ 
Sbjct: 42  RYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIHGQFPDPDRLRLSLTHATNSSKRIL 101

Query: 174 VFFFDEAKLGVGVVK--SITNRMG----TENFTRGILVCQKPFSPQAKTAVATFN 28
           V F      G GVVK  +I N  G     +  T  IL+ +   + QA  AV  F+
Sbjct: 102 VIF-----CGPGVVKVTAIRNTAGQIINRDTLTGLILIVENHITSQALKAVNLFS 151

[130][TOP]
>UniRef100_B6TJI5 DNA-directed RNA polymerase II 23 kDa polypeptide n=1 Tax=Zea mays
           RepID=B6TJI5_MAIZE
          Length = 264

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 31/118 (26%), Positives = 56/118 (47%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
           +L+  RRT L+ML DR Y+V + EL+ +  +F++ +      E+L    T   DPS +V 
Sbjct: 69  RLFLARRTALEMLRDRGYAVPEEELARTLPEFRAWWEYRPELERLAFSTTLASDPSSKVK 128

Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRLEV 1
           V F     + +  ++ I   +  EN +R IL+ Q       + ++     F     ++
Sbjct: 129 VVFCPPGPVKIAAIRLIYTEVKDENLSRLILILQGKIMSTTRESIKEIFRFKVDTFQI 186

[131][TOP]
>UniRef100_B4FYH9 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=B4FYH9_MAIZE
          Length = 248

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 31/118 (26%), Positives = 56/118 (47%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
           +L+  RRT L+ML DR Y+V + EL+ +  +F++ +      E+L    T   DPS +V 
Sbjct: 53  RLFLARRTALEMLRDRGYAVPEEELARTLPEFRAWWEYRPELERLAFSTTLTSDPSSKVK 112

Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRLEV 1
           V F     + +  ++ I   +  EN +R IL+ Q       + ++     F     ++
Sbjct: 113 VVFCPPGPVKIAAIRLIYTEVKDENLSRLILILQGKIMSTTRESIKEIFRFKVDTFQI 170

[132][TOP]
>UniRef100_Q6FQA6 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
           Tax=Candida glabrata RepID=RPAB1_CANGA
          Length = 215

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
 Frame = -3

Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193
           +D  +++L++  RT+ +M+ DR Y ++  EL ++ +DFK ++ +   R Q ++     + 
Sbjct: 5   NDRSISRLWRTFRTVKEMVRDRGYFIAQEELDLTLEDFKVKYCDSMGRAQRKMMSFQANP 64

Query: 192 PSERVCVF---------FFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
             E +  F         F DE  +GV  +K+    +  + F  GI + Q   +P A   V
Sbjct: 65  TEESMTKFPDMGTLWVEFCDEPSVGVKTMKTFVIHIQEKQFQTGIFIYQNNITPSAMKLV 124

Query: 39  -----ATFNNFSASRLEV 1
                AT   F  + L V
Sbjct: 125 PSIPPATIETFHEAALVV 142

[133][TOP]
>UniRef100_Q4U8E3 DNA-directed RNA polymerase, subunit (RPB5 homologue), putative n=1
           Tax=Theileria annulata RepID=Q4U8E3_THEAN
          Length = 205

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
           D++  +L++ RRT  +ML DR Y +   E   +  +FK+ +  + + R ++ +  + +  
Sbjct: 2   DDEEGRLFRCRRTCCEMLEDRGYFIPSQEKLETFAEFKARYEMYDKVRSKMLLVASLRTA 61

Query: 192 PSERVCVFFFDE-AKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
              ++ V+F DE  K GV  ++ +T RM   +  R ILV Q   +P AK A+
Sbjct: 62  AENKLLVYFADEKKKTGVKPIRELTERMEDHDIHRAILVTQNVLTPFAKDAI 113

[134][TOP]
>UniRef100_A7TEH4 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
           DSM 70294 RepID=A7TEH4_VANPO
          Length = 215

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199
           +  +++L++  RT+ +M+ DR Y ++  E+ +S +DFK+++ +     +R+ +  Q    
Sbjct: 6   ERSISRLWRTFRTVKEMVRDRGYFIAQEEIDLSLEDFKAKYCDSMGRPQRKMMSFQANPT 65

Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV- 40
           ++  E+      + V F DE  +GV  +K+    +  +N+  GI V Q   +P A   V 
Sbjct: 66  EETMEKFPTMSSLWVEFCDEPSVGVKTMKNFVIHIQEKNYQTGIFVYQTNVTPSAMKLVP 125

Query: 39  ----ATFNNFSASRLEV 1
               AT   F  + L V
Sbjct: 126 SIPPATIETFHEASLIV 142

[135][TOP]
>UniRef100_B0EA74 DNA-directed RNA polymerases I, II, and III subunit RPABC1,
           putative n=1 Tax=Entamoeba dispar SAW760
           RepID=B0EA74_ENTDI
          Length = 204

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
 Frame = -3

Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEF---GEHFRREQLEIQKTHKD 196
           E+VT +Y+  +T+L+ML DR Y  S+ + + + + FK  F   GE    ++L I+   ++
Sbjct: 2   ENVTHIYRAWKTVLEMLRDRGYITSEEDHNTTLEGFKERFYKGGEGVDHKELTIKVVKEN 61

Query: 195 DPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAK 49
           D ++ + VFF +   L   V+      + +E+  R I+V +   S   K
Sbjct: 62  DATDGIIVFFAEGVSLKTDVLGKYLTEVESEHVKRAIIVYRGKLSSPVK 110

[136][TOP]
>UniRef100_B6SJT2 DNA-directed RNA polymerase II 23 kDa polypeptide n=1 Tax=Zea mays
           RepID=B6SJT2_MAIZE
          Length = 154

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 31/118 (26%), Positives = 54/118 (45%)
 Frame = -3

Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
           +L+  RRT L+ML DR Y+V + EL+ +  +F++        E+L    T   DPS +V 
Sbjct: 12  RLFLARRTALEMLXDRGYAVPEEELARTLPEFRAWXEYXPELERLAFXTTLTSDPSSKVK 71

Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRLEV 1
           V F     + +  ++ I   +  EN  R IL+ Q       + ++     F     ++
Sbjct: 72  VVFCPPGPVKIAAIRLIYTEVKDENLARLILILQGKIMSPTRESIKEIFRFKVDTFQI 129

[137][TOP]
>UniRef100_C4LW54 RNA polymerase subunit Rpb5, putative n=1 Tax=Entamoeba histolytica
           HM-1:IMSS RepID=C4LW54_ENTHI
          Length = 204

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
 Frame = -3

Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEF---GEHFRREQLEIQKTHKD 196
           E VT +Y+  +T+L+ML DR Y  S+ + + + + FK  F   GE    ++L I+   ++
Sbjct: 2   ESVTHIYRAWKTVLEMLRDRGYITSEEDHNTTLEGFKERFYKGGEGVDHKELTIKVVKEN 61

Query: 195 DPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAK 49
           D ++ + VFF +   L   V+      + +E+  R I+V +   S   K
Sbjct: 62  DATDGIIVFFAEGVSLKTDVLGKYLTEVESEHVKRAIIVYRGKLSSPVK 110

[138][TOP]
>UniRef100_Q5KN51 DNA-directed RNA polymerases ii 24 kDa polypeptide, putative n=1
           Tax=Filobasidiella neoformans RepID=Q5KN51_CRYNE
          Length = 221

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 27/121 (22%), Positives = 60/121 (49%), Gaps = 14/121 (11%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFG--------------EHFR 232
           + ++ +L+++ RT+ +M+ DR Y ++D E+++S ++FK   G              +   
Sbjct: 6   NRELARLWRVSRTVHEMVRDRGYLLADYEINVSFEEFKDRHGATGSVEWMKCPQADKSSS 65

Query: 231 REQLEIQKTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQA 52
           R  +     H++D ++++ V+F  +  +    +K+    M      RGI++  +  SP A
Sbjct: 66  RSNMSFDAIHENDNTDKIFVYFCADKNVSKASMKTFIGSMDKMGARRGIIIWSEKMSPAA 125

Query: 51  K 49
           K
Sbjct: 126 K 126

[139][TOP]
>UniRef100_C5MBX4 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Candida
           tropicalis MYA-3404 RepID=C5MBX4_CANTT
          Length = 214

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 28/121 (23%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
 Frame = -3

Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199
           D  +++L++  +T+ +M+ DR Y +S  E+ M+ ++F+S+  +     +R+Q+  Q    
Sbjct: 5   DRSISRLFRTFKTVKEMVRDRGYYISQEEIDMTLEEFRSKICDSMGNPQRKQMCFQAQPT 64

Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
            +  E+      + V F DE+ +G+  +++    +  +NF+ G+ + Q   +P A   + 
Sbjct: 65  GETLEKFPELGSLWVEFCDESSVGIKTMRNFCIHITEKNFSTGLFIYQNSITPSANKLIP 124

Query: 36  T 34
           T
Sbjct: 125 T 125