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[1][TOP] >UniRef100_C6SXZ4 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6SXZ4_SOYBN Length = 206 Score = 120 bits (301), Expect = 8e-26 Identities = 55/119 (46%), Positives = 86/119 (72%) Frame = -3 Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202 MV +E++ +LY+IR+T++QML DRN+ V D E++MS+ +FKS++GEH +RE L I K+ Sbjct: 1 MVLSEEEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60 Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNN 25 KD+ +++ VFF DE K+GV +K+ TNRM +EN R ILV Q +P A+T ++ ++ Sbjct: 61 KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISS 119 [2][TOP] >UniRef100_C6SVA4 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6SVA4_SOYBN Length = 206 Score = 117 bits (293), Expect = 7e-25 Identities = 54/119 (45%), Positives = 85/119 (71%) Frame = -3 Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202 MV +E++ +LY+IR+T++QML DR + V D E++MS+ +FKS++GEH +RE L I K+ Sbjct: 1 MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60 Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNN 25 KD+ +++ VFF DE K+GV +K+ TNRM +EN R ILV Q +P A+T ++ ++ Sbjct: 61 KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISS 119 [3][TOP] >UniRef100_B9N7D1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N7D1_POPTR Length = 206 Score = 110 bits (274), Expect = 1e-22 Identities = 51/114 (44%), Positives = 81/114 (71%) Frame = -3 Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202 M +E++ +L +IR+T++QML DR Y V D E+ M+R+ F+S++G + +RE L I KT Sbjct: 1 MTLTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK 60 Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 ++D S+++ VFF +EAK+GV +K+ TNRM +EN R ILV Q+ +P A+T + Sbjct: 61 RNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI 114 [4][TOP] >UniRef100_B3TLL2 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Elaeis guineensis RepID=B3TLL2_ELAGV Length = 204 Score = 107 bits (268), Expect = 5e-22 Identities = 50/111 (45%), Positives = 79/111 (71%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190 ++D+++L++IRRT++QML DR Y V D E++M++ F +FGE +RE L I K K+DP Sbjct: 3 EDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKLQFLEKFGEGVKREDLVINKAKKNDP 62 Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37 ++++ VFF ++AK+GV +K RM EN TRGILV Q+ +P A+ ++A Sbjct: 63 ADQIYVFFPNDAKVGVKQIKQYVERMKAENVTRGILVVQQALTPFARQSLA 113 [5][TOP] >UniRef100_A7PEL2 Chromosome chr11 scaffold_13, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7PEL2_VITVI Length = 206 Score = 107 bits (266), Expect = 9e-22 Identities = 50/114 (43%), Positives = 80/114 (70%) Frame = -3 Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202 M +E++++L++IR+T++QML DR Y V D E++M++ F S+FGE+ +RE L I K Sbjct: 1 MSASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAK 60 Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 + D S+++ VFF +E K+GV +K+ TNRM +EN R ILV Q+ +P A+T + Sbjct: 61 RTDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI 114 [6][TOP] >UniRef100_B4FU06 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Zea mays RepID=B4FU06_MAIZE Length = 210 Score = 102 bits (255), Expect = 2e-20 Identities = 52/112 (46%), Positives = 75/112 (66%) Frame = -3 Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202 +V D+ V +LY+IRRT++QML DR Y V D EL+ SR+DF +FGE F RE L I K Sbjct: 5 LVTDEATVGRLYRIRRTVMQMLRDRGYLVVDHELATSRRDFLRKFGESFHREDLLINKYK 64 Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKT 46 K+DPS+++ VFF ++ K+G+ +K M EN +R +LV Q+ +P AK+ Sbjct: 65 KNDPSDQIYVFFPNDDKVGMKHIKKYVEMMTHENVSRAVLVLQQNLTPFAKS 116 [7][TOP] >UniRef100_A9RWG5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RWG5_PHYPA Length = 208 Score = 102 bits (253), Expect = 3e-20 Identities = 48/111 (43%), Positives = 78/111 (70%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190 DE +LY+IR+T+++ML DR+Y V+D EL++S++ F+ ++G+ +RE L IQK + + Sbjct: 7 DEQSARLYRIRKTVMEMLRDRDYVVADYELTLSKEQFREKYGDEPKREDLVIQKPRRSNN 66 Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37 +E + VFF +EAK+GV +K+ +RM TEN R ILV Q+ +P A+ V+ Sbjct: 67 AEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVS 117 [8][TOP] >UniRef100_O81098 RNA polymerase I, II and III 24.3 kDa subunit n=1 Tax=Arabidopsis thaliana RepID=O81098_ARATH Length = 205 Score = 101 bits (251), Expect = 5e-20 Identities = 46/115 (40%), Positives = 82/115 (71%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190 +E++ +LY+I++T++QML DR Y ++D+EL+M+++ F + G++ +RE L K ++D Sbjct: 4 EEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRNDN 63 Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNN 25 S+++ +FF DEAK+GV +K TNRM +EN R ILV Q+ +P A+T ++ ++ Sbjct: 64 SDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISS 118 [9][TOP] >UniRef100_A9NTD1 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=A9NTD1_PICSI Length = 191 Score = 101 bits (251), Expect = 5e-20 Identities = 50/114 (43%), Positives = 76/114 (66%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190 DE KL++IRRT+LQML DR+Y V D E++ +++ F +FGE ++E L I K ++ P Sbjct: 4 DEQTNKLFRIRRTVLQMLNDRDYLVGDFEINTTKEQFLDKFGEDPKKEDLVINKAKRNSP 63 Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFN 28 SE++ VFF +EAK+GV +K+ RM +E R ILV Q+ +P A+ +V F+ Sbjct: 64 SEQIFVFFPEEAKVGVKSIKTYVERMKSEGVFRAILVVQQALTPFARQSVQEFS 117 [10][TOP] >UniRef100_A9RKG6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RKG6_PHYPA Length = 208 Score = 99.4 bits (246), Expect = 2e-19 Identities = 46/115 (40%), Positives = 80/115 (69%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190 DE +LY+IR+T+++ML DR+Y V++ EL+ ++++F+ ++G+ +RE L IQK + + Sbjct: 7 DEQCARLYRIRKTVMEMLRDRDYVVAEFELNSTKEEFREKYGDEPKREDLVIQKPKRSNN 66 Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNN 25 +E + VFF +EAK+GV +K+ +RM TEN R ILV Q+ +P A+ V+ ++ Sbjct: 67 AEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVSEMSS 121 [11][TOP] >UniRef100_B8LR68 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LR68_PICSI Length = 194 Score = 97.4 bits (241), Expect = 7e-19 Identities = 48/103 (46%), Positives = 70/103 (67%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190 DE KL++IRRT+LQML DR+Y V D E++ +++ F +FGE ++E L I K ++ P Sbjct: 4 DEQTNKLFRIRRTVLQMLNDRDYLVGDFEINTTKEQFLDKFGEDPKKEDLVINKAKRNSP 63 Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFS 61 SE++ VFF +EAK+GV +K+ RM +E R ILV Q+ FS Sbjct: 64 SEQIFVFFPEEAKVGVKSIKTYVERMKSEGVFRAILVVQQEFS 106 [12][TOP] >UniRef100_B9RKM1 DNA-directed RNA polymerase II, putative n=1 Tax=Ricinus communis RepID=B9RKM1_RICCO Length = 225 Score = 95.9 bits (237), Expect = 2e-18 Identities = 48/134 (35%), Positives = 82/134 (61%), Gaps = 19/134 (14%) Frame = -3 Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202 M ++++ +L++IRRT++QML DR Y V+D+E+++++ F S++G++ +RE L I K+ Sbjct: 1 MTLSEDEIKRLFRIRRTVMQMLKDRTYLVTDSEINITKHQFTSKYGDNMKREDLVIHKSK 60 Query: 201 KDD-------------------PSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILV 79 +D P ++ VFF +E K+GV +K+ TNRM +EN R ILV Sbjct: 61 RDGSDSFYPTKLLFLNQLEAWLPLYQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV 120 Query: 78 CQKPFSPQAKTAVA 37 Q+ +P A+T +A Sbjct: 121 VQQSLTPFARTCIA 134 [13][TOP] >UniRef100_B9ETS9 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9ETS9_ORYSJ Length = 210 Score = 94.7 bits (234), Expect = 5e-18 Identities = 47/112 (41%), Positives = 74/112 (66%) Frame = -3 Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202 +V ++ V +L +IRRT++QML DR Y V + EL+M R+DF ++GE F RE L I K Sbjct: 5 LVTEEVMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINKYK 64 Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKT 46 K+DPS+++ VFF ++ K+G+ +K M EN +R +LV Q+ +P A++ Sbjct: 65 KNDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARS 116 [14][TOP] >UniRef100_Q5VQW7 Os01g0805800 protein n=2 Tax=Oryza sativa RepID=Q5VQW7_ORYSJ Length = 210 Score = 94.7 bits (234), Expect = 5e-18 Identities = 47/112 (41%), Positives = 74/112 (66%) Frame = -3 Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202 +V ++ V +L +IRRT++QML DR Y V + EL+M R+DF ++GE F RE L I K Sbjct: 5 LVTEEVMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINKYK 64 Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKT 46 K+DPS+++ VFF ++ K+G+ +K M EN +R +LV Q+ +P A++ Sbjct: 65 KNDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARS 116 [15][TOP] >UniRef100_A8J805 DNA-directed RNA polymerase II, 23 kDa polypeptide n=1 Tax=Chlamydomonas reinhardtii RepID=A8J805_CHLRE Length = 206 Score = 94.4 bits (233), Expect = 6e-18 Identities = 45/109 (41%), Positives = 71/109 (65%) Frame = -3 Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187 +++T+L+++RRT LQML DR Y VS E+ ++ F+ FGE+ R++ L I +DDP+ Sbjct: 2 DNLTRLWRVRRTCLQMLNDRGYLVSQEEIGTTKDQFRDRFGENPRKDDLTILVPRQDDPT 61 Query: 186 ERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 E++ VFF +E K+GV +K + RM E R I+V F+P AK+A+ Sbjct: 62 EQIFVFFPEEQKVGVKTIKLLAERMKDEKVNRAIMVTPSKFTPFAKSAL 110 [16][TOP] >UniRef100_UPI0000D9E960 PREDICTED: similar to DNA directed RNA polymerase II polypeptide E n=1 Tax=Macaca mulatta RepID=UPI0000D9E960 Length = 278 Score = 92.4 bits (228), Expect = 2e-17 Identities = 45/116 (38%), Positives = 73/116 (62%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+ED +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L + Sbjct: 3 DEEDTYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118 [17][TOP] >UniRef100_Q4S3C9 Chromosome 1 SCAF14751, whole genome shotgun sequence n=1 Tax=Tetraodon nigroviridis RepID=Q4S3C9_TETNG Length = 210 Score = 91.7 bits (226), Expect = 4e-17 Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + +FKS+FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR I+V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSL 118 [18][TOP] >UniRef100_C3KI95 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1 Tax=Anoplopoma fimbria RepID=C3KI95_9PERC Length = 210 Score = 91.7 bits (226), Expect = 4e-17 Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + +FKS+FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR I+V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSL 118 [19][TOP] >UniRef100_C1BIS3 DNA-directed RNA polymerase II 23 kDa polypeptide n=1 Tax=Osmerus mordax RepID=C1BIS3_OSMMO Length = 210 Score = 91.7 bits (226), Expect = 4e-17 Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + +FKS+FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR I+V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSL 118 [20][TOP] >UniRef100_B5FX59 Putative DNA directed RNA polymerase II polypeptide E n=2 Tax=Neognathae RepID=B5FX59_TAEGU Length = 210 Score = 91.3 bits (225), Expect = 5e-17 Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSL 118 [21][TOP] >UniRef100_C1C3Q7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1 Tax=Rana catesbeiana RepID=C1C3Q7_RANCA Length = 210 Score = 91.3 bits (225), Expect = 5e-17 Identities = 45/116 (38%), Positives = 72/116 (62%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + +FK++FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKAQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR I+V Q+ +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQQGMTPSAKQSL 118 [22][TOP] >UniRef100_B5XGU7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1 Tax=Salmo salar RepID=B5XGU7_SALSA Length = 159 Score = 91.3 bits (225), Expect = 5e-17 Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 DDE+ +L+KIR+TI+Q+ DR Y V+ EL + +FKS+FG+ RR L + Sbjct: 3 DDEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR +V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSL 118 [23][TOP] >UniRef100_B5X957 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=2 Tax=Euteleostei RepID=B5X957_SALSA Length = 210 Score = 91.3 bits (225), Expect = 5e-17 Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 DDE+ +L+KIR+TI+Q+ DR Y V+ EL + +FKS+FG+ RR L + Sbjct: 3 DDEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR +V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSL 118 [24][TOP] >UniRef100_UPI000194DF40 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide E, 25kDa n=1 Tax=Taeniopygia guttata RepID=UPI000194DF40 Length = 119 Score = 90.9 bits (224), Expect = 7e-17 Identities = 44/113 (38%), Positives = 71/113 (62%), Gaps = 5/113 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAK 49 H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAK 115 [25][TOP] >UniRef100_UPI00005A3E0E PREDICTED: similar to DNA directed RNA polymerase II polypeptide E isoform 1 n=1 Tax=Canis lupus familiaris RepID=UPI00005A3E0E Length = 208 Score = 90.9 bits (224), Expect = 7e-17 Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118 [26][TOP] >UniRef100_UPI0000EB19D6 DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RNA polymerases I, II, and III subunit ABC1) (DNA-directed RNA polymerase II subunit E) (RPB5) (DNA-directed RNA polymerase II 23 kDa polypeptide) (XAP4). n=1 Tax=Canis lupus familiaris RepID=UPI0000EB19D6 Length = 212 Score = 90.9 bits (224), Expect = 7e-17 Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118 [27][TOP] >UniRef100_UPI00005A3E0F PREDICTED: similar to DNA-directed RNA polymerase II 23 kDa polypeptide (RPB25) (RPB5) (RPABC1) isoform 2 n=1 Tax=Canis lupus familiaris RepID=UPI00005A3E0F Length = 162 Score = 90.9 bits (224), Expect = 7e-17 Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118 [28][TOP] >UniRef100_Q6DEG5 Polymerase (RNA) II (DNA directed) polypeptide E n=1 Tax=Danio rerio RepID=Q6DEG5_DANRE Length = 210 Score = 90.9 bits (224), Expect = 7e-17 Identities = 45/116 (38%), Positives = 71/116 (61%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + +F+S+FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFRSQFGDKPSEGRPRRNDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR I+V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSL 118 [29][TOP] >UniRef100_Q8R0H0 Polr2e protein n=1 Tax=Mus musculus RepID=Q8R0H0_MOUSE Length = 162 Score = 90.9 bits (224), Expect = 7e-17 Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118 [30][TOP] >UniRef100_Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=3 Tax=Murinae RepID=RPAB1_MOUSE Length = 210 Score = 90.9 bits (224), Expect = 7e-17 Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118 [31][TOP] >UniRef100_Q28HF5 Polymerase (RNA) II (DNA directed) polypeptide E n=2 Tax=Xenopus RepID=Q28HF5_XENTR Length = 210 Score = 90.5 bits (223), Expect = 9e-17 Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + +FK++FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKAQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSL 118 [32][TOP] >UniRef100_C1BZT4 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1 Tax=Esox lucius RepID=C1BZT4_ESOLU Length = 210 Score = 90.1 bits (222), Expect = 1e-16 Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + +FKS+FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLA 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR +V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSL 118 [33][TOP] >UniRef100_Q01A87 RNA polymerase I, II and III 24.3 kDa subunit (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01A87_OSTTA Length = 1124 Score = 90.1 bits (222), Expect = 1e-16 Identities = 47/105 (44%), Positives = 63/105 (60%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 +L+++R+TI +MLA R Y VS EL F EFGE +R+ L I KDDPSE + Sbjct: 927 RLFRVRKTIHKMLAARGYLVSARELERDADSFAEEFGEEPKRDSLTILAPRKDDPSENIF 986 Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 VFF DE K+GV +K + RM EN R I+V Q +P AK ++ Sbjct: 987 VFFPDEEKVGVKTIKDLAKRMKEENVFRAIIVVQASLTPFAKQSL 1031 [34][TOP] >UniRef100_B5X8S7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1 Tax=Salmo salar RepID=B5X8S7_SALSA Length = 210 Score = 89.7 bits (221), Expect = 2e-16 Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + +FKS+FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR +V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSL 118 [35][TOP] >UniRef100_B4FGM1 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B4FGM1_MAIZE Length = 206 Score = 89.7 bits (221), Expect = 2e-16 Identities = 43/114 (37%), Positives = 70/114 (61%) Frame = -3 Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202 M D+++++L++IRRT+ +ML DR Y V D ++ + R F +G RR++L T Sbjct: 1 MASPDDEISRLFRIRRTVYEMLRDRGYGVRDEQIKLERHKFIERYGNPVRRDELTFNATK 60 Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 + PS+++ VFF +EAK GV +++ +M EN GILV Q+ S A++AV Sbjct: 61 LNGPSDQIYVFFPNEAKPGVKTIRNYVEKMKNENVFAGILVVQQALSAFARSAV 114 [36][TOP] >UniRef100_A4RWP8 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RWP8_OSTLU Length = 205 Score = 89.7 bits (221), Expect = 2e-16 Identities = 47/106 (44%), Positives = 64/106 (60%) Frame = -3 Query: 357 TKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERV 178 T+L+++R+TI +MLA R Y VS EL F +FGE +RE L I +DDPSE + Sbjct: 7 TRLFRVRKTIHKMLAARGYLVSAKELERDIDSFTEDFGEEPKRESLTILAPKRDDPSENI 66 Query: 177 CVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 VFF DE K+GV +K + RM EN R I+V Q +P AK ++ Sbjct: 67 FVFFPDEEKVGVKTIKDLAKRMKDENVFRAIIVVQASLTPFAKQSL 112 [37][TOP] >UniRef100_Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1 Tax=Pongo abelii RepID=RPAB1_PONAB Length = 210 Score = 89.7 bits (221), Expect = 2e-16 Identities = 43/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++F+++FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFRAQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118 [38][TOP] >UniRef100_A6N9W6 25-kDa subunit RNA polymerase n=1 Tax=Ornithodoros parkeri RepID=A6N9W6_ORNPR Length = 210 Score = 89.0 bits (219), Expect = 3e-16 Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+ + KL++IR+TI+Q+ DR Y V+ EL + FK +FG+ R L + Sbjct: 3 DEAETYKLWRIRKTIMQLCHDRGYLVTQDELDQTLDQFKQQFGDKPSERRPARSDLIVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF DE K+G+ +K+ RM EN TR I+V Q+ +P AK A+ Sbjct: 63 AHNDDPTDQMFVFFPDEPKIGIKTIKTYCQRMQEENITRAIIVVQQGMTPSAKQAL 118 [39][TOP] >UniRef100_UPI000180C3C9 PREDICTED: similar to 25-kDa subunit RNA polymerase n=1 Tax=Ciona intestinalis RepID=UPI000180C3C9 Length = 210 Score = 87.8 bits (216), Expect = 6e-16 Identities = 44/116 (37%), Positives = 71/116 (61%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208 D+ + +L++IR+T++Q+ DR Y V+ EL S ++FK EFG+ R+ L I Sbjct: 3 DEAETYRLWRIRKTVMQLCHDRGYLVTQHELDQSLEEFKEEFGDKPSERRPGRQDLTILV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+GV +K+ RM EN R I+V Q+ +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGVKTIKTYCQRMQEENIQRAIIVVQQSMTPSAKQSL 118 [40][TOP] >UniRef100_UPI0000587A08 PREDICTED: similar to RPB5 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000587A08 Length = 210 Score = 87.8 bits (216), Expect = 6e-16 Identities = 42/116 (36%), Positives = 71/116 (61%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+ + +L+++RRTI+Q+ DR Y V+ EL + + FK +FG+ R+ L + Sbjct: 3 DEAETYRLWRVRRTIMQLCHDRGYLVTQEELDQTLEQFKEQFGDKPSENRPSRKDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K+ RM EN TR I+ Q+ +P AKT++ Sbjct: 63 AHNDDPTDQMFVFFPEEKKVGMKTIKAYCQRMQEENITRAIITVQEKMTPSAKTSL 118 [41][TOP] >UniRef100_P19388 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1 Tax=Homo sapiens RepID=RPAB1_HUMAN Length = 210 Score = 87.8 bits (216), Expect = 6e-16 Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++ G+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQSGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118 [42][TOP] >UniRef100_C3ZQF0 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZQF0_BRAFL Length = 210 Score = 87.4 bits (215), Expect = 8e-16 Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208 D+++ KL++IR+TI+Q+ DR Y V+ EL FK +FG+ R+ L + Sbjct: 3 DEQETYKLWRIRKTIMQLCHDRGYLVTQDELDQRLDQFKDQFGDKPSEGKPARKDLVVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF DE K+G+ +K RM EN +R I+V Q +P AK A+ Sbjct: 63 AHNDDPTDQMFVFFADEPKIGIKTIKMYCQRMQEENISRAIIVVQMGMTPSAKQAL 118 [43][TOP] >UniRef100_B7T1F2 RNA polymerase II (Fragment) n=1 Tax=Oreochromis niloticus RepID=B7T1F2_ORENI Length = 108 Score = 87.0 bits (214), Expect = 1e-15 Identities = 44/107 (41%), Positives = 66/107 (61%), Gaps = 5/107 (4%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQKTHKDDP 190 +L+KIR+TI+Q+ DR Y V+ EL + ++FKS+FG+ RR L + H DDP Sbjct: 1 RLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKSQFGDKPSEGRPRRTDLTVLVAHNDDP 60 Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAK 49 ++++ VFF +E K+G+ +K RM EN TR I+V Q +P AK Sbjct: 61 TDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAK 107 [44][TOP] >UniRef100_Q7XUF8 OJ991113_30.8 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XUF8_ORYSJ Length = 205 Score = 86.7 bits (213), Expect = 1e-15 Identities = 42/110 (38%), Positives = 71/110 (64%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190 +E+ ++L++IRRT++QML DR Y V++ ++ + R DF + FG+ R+ L + KD+ Sbjct: 4 EEETSRLFRIRRTVMQMLRDRGYLVTELDIDLPRGDFVARFGDPVDRDHLVFSRHKKDNG 63 Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 ++++ VFF +AK GV ++S RM E+ GILV Q+ S A++AV Sbjct: 64 ADQIYVFFPKDAKPGVKTIRSYVERMKQESVFNGILVVQQALSAFARSAV 113 [45][TOP] >UniRef100_B7EQI7 cDNA clone:J023098I05, full insert sequence n=1 Tax=Oryza sativa Japonica Group RepID=B7EQI7_ORYSJ Length = 167 Score = 86.7 bits (213), Expect = 1e-15 Identities = 42/110 (38%), Positives = 71/110 (64%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190 +E+ ++L++IRRT++QML DR Y V++ ++ + R DF + FG+ R+ L + KD+ Sbjct: 4 EEETSRLFRIRRTVMQMLRDRGYLVTELDIDLPRGDFVARFGDPVDRDHLVFSRHKKDNG 63 Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 ++++ VFF +AK GV ++S RM E+ GILV Q+ S A++AV Sbjct: 64 ADQIYVFFPKDAKPGVKTIRSYVERMKQESVFNGILVVQQALSAFARSAV 113 [46][TOP] >UniRef100_A3AV22 Putative uncharacterized protein n=2 Tax=Oryza sativa RepID=A3AV22_ORYSJ Length = 217 Score = 86.7 bits (213), Expect = 1e-15 Identities = 42/110 (38%), Positives = 71/110 (64%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190 +E+ ++L++IRRT++QML DR Y V++ ++ + R DF + FG+ R+ L + KD+ Sbjct: 4 EEETSRLFRIRRTVMQMLRDRGYLVTELDIDLPRGDFVARFGDPVDRDHLVFSRHKKDNG 63 Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 ++++ VFF +AK GV ++S RM E+ GILV Q+ S A++AV Sbjct: 64 ADQIYVFFPKDAKPGVKTIRSYVERMKQESVFNGILVVQQALSAFARSAV 113 [47][TOP] >UniRef100_Q2T9T3 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1 Tax=Bos taurus RepID=RPAB1_BOVIN Length = 210 Score = 86.7 bits (213), Expect = 1e-15 Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ L + ++FK++FG RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDGLDQTLEEFKAQFGGKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118 [48][TOP] >UniRef100_Q5DDM1 SJCHGC05306 protein n=1 Tax=Schistosoma japonicum RepID=Q5DDM1_SCHJA Length = 206 Score = 85.5 bits (210), Expect = 3e-15 Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 1/115 (0%) Frame = -3 Query: 378 VFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHK 199 + DD + KL++IR+TIL+M DR Y V EL S +DFK+ G+ R+ L + H+ Sbjct: 1 MLDDSETYKLWRIRKTILKMCKDRGYLVMPKELEQSLEDFKATVGDPPARKDLLMVVNHE 60 Query: 198 DDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQ-KPFSPQAKTAVA 37 +DP++ + VFF +E K+ + V++ N+M ++ R ILV Q K +P AKTA+A Sbjct: 61 EDPADMLYVFFPEEEKVNMKTVRAYLNQMQQDSTYRAILVLQEKGLTPSAKTAIA 115 [49][TOP] >UniRef100_B0X7A5 DNA-directed RNA polymerase II 23 kDa polypeptide n=3 Tax=Culicidae RepID=B0X7A5_CULQU Length = 210 Score = 85.5 bits (210), Expect = 3e-15 Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 DD + KL++IR+T++Q+ DR Y V+ EL + + FK +FG+ R L + Sbjct: 3 DDAETYKLWRIRKTVMQLSHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF DE K+G+ +K+ RM EN R I+V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPDEPKIGIKTIKTYCTRMQEENIHRAIVVVQAGMTPSAKQSL 118 [50][TOP] >UniRef100_UPI000056951D UPI000056951D related cluster n=1 Tax=Danio rerio RepID=UPI000056951D Length = 211 Score = 85.1 bits (209), Expect = 4e-15 Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 6/117 (5%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+T++Q+ DR Y V+ EL + +FK +FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTVMQLCHDRGYLVTQDELDQTLDEFKIQFGDRPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFF-FDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPVEELKVGIKTIKMYCQRMQEENITRAVIVVQTGMTPSAKQSL 119 [51][TOP] >UniRef100_C4PZ68 DNA-directed RNA polymerase II, putative (Fragment) n=1 Tax=Schistosoma mansoni RepID=C4PZ68_SCHMA Length = 208 Score = 85.1 bits (209), Expect = 4e-15 Identities = 46/113 (40%), Positives = 71/113 (62%), Gaps = 1/113 (0%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193 DD + KL++IR+TIL+M DR Y V EL S +DFK+ G+ R+ L + H++D Sbjct: 5 DDSETYKLWRIRKTILKMCKDRGYLVMPKELEQSLEDFKATVGDPPTRKDLLMVVNHEED 64 Query: 192 PSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQ-KPFSPQAKTAVA 37 P++ + VFF +E K+ + V++ N+M ++ R ILV Q K +P AKTA+A Sbjct: 65 PADMLYVFFPEEEKVNMKTVRAYLNQMQQDSTYRAILVLQEKGLTPSAKTAIA 117 [52][TOP] >UniRef100_C1EDR8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EDR8_9CHLO Length = 204 Score = 84.7 bits (208), Expect = 5e-15 Identities = 42/109 (38%), Positives = 65/109 (59%) Frame = -3 Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187 E T+L++IR+T+ +ML R Y V+ EL + F EFGE RR+ L +Q ++DP+ Sbjct: 3 EKKTRLFRIRKTVCKMLNARGYLVAQAELDRDKDSFTEEFGEDPRRDALTLQFDLREDPT 62 Query: 186 ERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 + + VFF DE K+GV +K RM E R I+V Q+ +P A+ ++ Sbjct: 63 QHIFVFFPDEEKVGVKTIKEYAKRMKDEQVNRAIIVVQQSLTPFARQSL 111 [53][TOP] >UniRef100_Q9N5K2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1 Tax=Caenorhabditis elegans RepID=RPAB1_CAEEL Length = 211 Score = 84.7 bits (208), Expect = 5e-15 Identities = 42/119 (35%), Positives = 72/119 (60%), Gaps = 5/119 (4%) Frame = -3 Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLE 217 M D+ + +L++IR+T+LQM+ DR Y V+ EL + FK ++G+ R L Sbjct: 1 MADDELETYRLWRIRKTVLQMVHDRGYLVAQDELDQPLETFKVQYGDRPSEKKPARSDLT 60 Query: 216 IQKTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 I H DDP++++ VFF ++AK+G+ +K+I +M +N +R I+V Q +P AK ++ Sbjct: 61 ILVAHNDDPADQMFVFFPEDAKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSI 119 [54][TOP] >UniRef100_UPI000186E78B DNA-directed RNA polymerase II 23 kDa polypeptide, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E78B Length = 210 Score = 84.3 bits (207), Expect = 6e-15 Identities = 41/117 (35%), Positives = 70/117 (59%), Gaps = 5/117 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208 D+ + KL++IR+T++Q+ DR Y V+ EL + + FK +FG+ R L + Sbjct: 3 DEAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKIPARSDLIVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37 H DDP++++ VFF D+ K+G+ +K+ RM EN R I+V Q+ +P AK +++ Sbjct: 63 AHNDDPTDQMFVFFPDDPKIGIKTIKTYCQRMQEENIHRAIIVVQQGMTPSAKQSLS 119 [55][TOP] >UniRef100_C6K8L9 RNA polymerase II B subunit n=1 Tax=Caenorhabditis brenneri RepID=C6K8L9_CAEBE Length = 211 Score = 84.0 bits (206), Expect = 8e-15 Identities = 43/119 (36%), Positives = 69/119 (57%), Gaps = 5/119 (4%) Frame = -3 Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLE 217 M D+ + +L++IR+T+LQM+ DR Y V+ EL FK FG+ R L Sbjct: 1 MADDELETYRLWRIRKTVLQMVHDRGYLVAQEELDQPLGHFKETFGDRPSEKKPARADLT 60 Query: 216 IQKTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 I H DDP++++ VFF D+ K+G+ +K+I +M +N +R I+V Q +P AK ++ Sbjct: 61 ILVAHNDDPADQMFVFFPDDTKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSI 119 [56][TOP] >UniRef100_A8XGH1 C. briggsae CBR-RPB-5 protein n=1 Tax=Caenorhabditis briggsae RepID=A8XGH1_CAEBR Length = 211 Score = 84.0 bits (206), Expect = 8e-15 Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 5/119 (4%) Frame = -3 Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLE 217 M D+ + +L++IR+T+LQM+ DR Y V+ EL + FK FG+ R L Sbjct: 1 MADDELETYRLWRIRKTVLQMVHDRGYLVAQEELDQPLETFKETFGDRPSEKKPARSDLT 60 Query: 216 IQKTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 I H DDP++++ VFF ++ K+G+ +K+I +M +N +R I+V Q +P AK ++ Sbjct: 61 ILVAHNDDPADQMFVFFPEDTKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSI 119 [57][TOP] >UniRef100_UPI0000D56A05 PREDICTED: similar to AGAP010064-PA n=1 Tax=Tribolium castaneum RepID=UPI0000D56A05 Length = 210 Score = 83.6 bits (205), Expect = 1e-14 Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+ + KL++IR+T++Q+ DR Y V+ EL + + FK + G+ R L I Sbjct: 3 DEAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQCGDKPSEKRPSRNDLTILV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF DE K+G+ +K+ RM EN R I+V Q+ +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPDEPKIGIKAIKTYCQRMQDENIHRAIIVVQQGMTPSAKQSL 118 [58][TOP] >UniRef100_C1MXV4 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MXV4_9CHLO Length = 206 Score = 83.6 bits (205), Expect = 1e-14 Identities = 42/109 (38%), Positives = 63/109 (57%) Frame = -3 Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187 E VTKL++I +T+ +ML R Y V EL + F+ +G+ +RE L + +DDPS Sbjct: 5 EKVTKLFRIHKTVHKMLNARGYLVQQKELERDKDSFREAYGDDPKRESLTLMLPRRDDPS 64 Query: 186 ERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 E + VFF +E K+GV +K RM E+ R I+V Q +P AK ++ Sbjct: 65 ENIFVFFPEEEKVGVKTIKEYAKRMKDESVFRAIIVVQASLTPFAKQSL 113 [59][TOP] >UniRef100_UPI000051A7F2 PREDICTED: similar to Rpb5 CG11979-PA n=1 Tax=Apis mellifera RepID=UPI000051A7F2 Length = 179 Score = 83.2 bits (204), Expect = 1e-14 Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+ + KL++IR+T++Q+ DR Y V+ EL + + FK +FG+ R L + Sbjct: 3 DEAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF DE K+G+ +K+ RM E R I+V Q+ +P AK ++ Sbjct: 63 AHNDDPTDQLFVFFPDEPKIGIKTIKTYCQRMQEEKIHRAIIVVQQGMTPSAKQSL 118 [60][TOP] >UniRef100_UPI00003C0CAC PREDICTED: similar to Rpb5 CG11979-PA n=1 Tax=Apis mellifera RepID=UPI00003C0CAC Length = 210 Score = 83.2 bits (204), Expect = 1e-14 Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+ + KL++IR+T++Q+ DR Y V+ EL + + FK +FG+ R L + Sbjct: 3 DEAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF DE K+G+ +K+ RM E R I+V Q+ +P AK ++ Sbjct: 63 AHNDDPTDQLFVFFPDEPKIGIKTIKTYCQRMQEEKIHRAIIVVQQGMTPSAKQSL 118 [61][TOP] >UniRef100_UPI00015B5456 PREDICTED: similar to ENSANGP00000006082 n=1 Tax=Nasonia vitripennis RepID=UPI00015B5456 Length = 210 Score = 82.8 bits (203), Expect = 2e-14 Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+ + KL++IR+T++Q+ DR Y V+ EL + + FK +FG+ R L + Sbjct: 3 DEAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF DE K+G+ +K+ RM E R I+V Q +P AK ++ Sbjct: 63 AHNDDPTDQLFVFFPDEPKIGIKTIKTYCQRMQEEKIHRAIIVVQSGMTPSAKQSL 118 [62][TOP] >UniRef100_C1C1G9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1 Tax=Caligus clemensi RepID=C1C1G9_9MAXI Length = 210 Score = 82.8 bits (203), Expect = 2e-14 Identities = 41/116 (35%), Positives = 69/116 (59%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQ-----LEIQK 208 D+ + KL+K+R+T++ + DR Y V+ EL ++ FK +FG+ +Q L I Sbjct: 3 DESETYKLWKVRKTVMSLCHDRGYLVTQDELDQTQDQFKVQFGDKPSEKQPSRNDLTILV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF ++ K+GV +++ RM EN TR I+V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEDPKIGVKHIRTYCKRMQEENITRAIIVVQAGMTPSAKQSL 118 [63][TOP] >UniRef100_B3S3Q9 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S3Q9_TRIAD Length = 210 Score = 82.8 bits (203), Expect = 2e-14 Identities = 49/135 (36%), Positives = 73/135 (54%), Gaps = 11/135 (8%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMS----RKDFKSEFGEHFR-REQLEIQK 208 D+E+ KL++IR+T++QM DR Y VS EL + + F SE E + R L + Sbjct: 3 DEEEAYKLWRIRKTVMQMCHDRGYMVSQEELDQTFDQFHEQFYSEMSESSQVRGLLSMLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA--- 37 H DDP+E++ VFF DE K+G+ +K RM EN R I++ Q +P AK ++ Sbjct: 63 HHIDDPTEQLFVFFPDEPKVGINTIKKYCQRMQRENINRAIIIIQSGMTPTAKQSLIDMA 122 Query: 36 ---TFNNFSASRLEV 1 T +F S L + Sbjct: 123 PKYTLESFMESELMI 137 [64][TOP] >UniRef100_C4WY48 ACYPI000388 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WY48_ACYPI Length = 210 Score = 82.4 bits (202), Expect = 2e-14 Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 6/117 (5%) Frame = -3 Query: 372 DDE-DVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQ 211 DDE + KL++IR+T++Q+ DR Y V+ EL + + FK +FG+ R L + Sbjct: 2 DDECESYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPGRSDLIVL 61 Query: 210 KTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K+ RM E TR I+V Q+ +P AK ++ Sbjct: 62 VAHNDDPTDQMFVFFPEEPKIGIKTIKTYCQRMQEETITRAIIVVQQGMTPSAKQSL 118 [65][TOP] >UniRef100_B4MK71 GK20665 n=1 Tax=Drosophila willistoni RepID=B4MK71_DROWI Length = 210 Score = 80.9 bits (198), Expect = 7e-14 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+ + KL++IR+TI+Q+ DR Y V+ EL + + FK FG+ R L + Sbjct: 3 DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K+ RM EN R I+V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118 [66][TOP] >UniRef100_B4KPZ3 GI19761 n=2 Tax=Drosophila RepID=B4KPZ3_DROMO Length = 210 Score = 80.9 bits (198), Expect = 7e-14 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+ + KL++IR+TI+Q+ DR Y V+ EL + + FK FG+ R L + Sbjct: 3 DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSDKRPSRSDLIVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K+ RM EN R I+V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118 [67][TOP] >UniRef100_B4J892 GH20567 n=1 Tax=Drosophila grimshawi RepID=B4J892_DROGR Length = 210 Score = 80.9 bits (198), Expect = 7e-14 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+ + KL++IR+TI+Q+ DR Y V+ EL + + FK FG+ R L + Sbjct: 3 DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSDKRPARSDLIVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K+ RM EN R I+V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118 [68][TOP] >UniRef100_B5DLL1 GA22602 n=2 Tax=pseudoobscura subgroup RepID=B5DLL1_DROPS Length = 210 Score = 80.9 bits (198), Expect = 7e-14 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+ + KL++IR+TI+Q+ DR Y V+ EL + + FK FG+ R L + Sbjct: 3 DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKDMFGDKPSEKRPARSDLIVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K+ RM EN R I+V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118 [69][TOP] >UniRef100_Q7JZF5 Rpb5 n=5 Tax=melanogaster subgroup RepID=Q7JZF5_DROME Length = 210 Score = 80.9 bits (198), Expect = 7e-14 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+ + KL++IR+TI+Q+ DR Y V+ EL + + FK FG+ R L + Sbjct: 3 DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K+ RM EN R I+V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118 [70][TOP] >UniRef100_B3MEP0 GF12445 n=1 Tax=Drosophila ananassae RepID=B3MEP0_DROAN Length = 210 Score = 80.9 bits (198), Expect = 7e-14 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+ + KL++IR+TI+Q+ DR Y V+ EL + + FK FG+ R L + Sbjct: 3 DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPSRSDLIVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K+ RM EN R I+V Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118 [71][TOP] >UniRef100_C1BRK0 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1 Tax=Caligus rogercresseyi RepID=C1BRK0_9MAXI Length = 210 Score = 80.5 bits (197), Expect = 9e-14 Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQ-----LEIQK 208 D+ + KL+K+R+T++ + DR Y V+ EL + FK +FG+ +Q L I Sbjct: 3 DEAENYKLWKVRKTVMSLCHDRGYLVTQDELDQTLDQFKVQFGDKPSEKQPSRNDLTILV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF D+ K+G+ +++ RM EN TR I++ Q +P AK ++ Sbjct: 63 AHNDDPTDQMFVFFPDDPKIGIKHIRTYCKRMQEENITRAIILVQSGMTPSAKQSL 118 [72][TOP] >UniRef100_UPI0000E24E5A PREDICTED: similar to Polymerase (RNA) II (DNA directed) polypeptide E, 25kDa n=1 Tax=Pan troglodytes RepID=UPI0000E24E5A Length = 230 Score = 79.3 bits (194), Expect = 2e-13 Identities = 39/105 (37%), Positives = 64/105 (60%), Gaps = 5/105 (4%) Frame = -3 Query: 339 RRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQKTHKDDPSERVC 175 R+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L + H DDP++++ Sbjct: 34 RKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMF 93 Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++ Sbjct: 94 VFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 138 [73][TOP] >UniRef100_B4GBQ3 GL10501 n=1 Tax=Drosophila persimilis RepID=B4GBQ3_DROPE Length = 210 Score = 77.8 bits (190), Expect = 6e-13 Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208 D+E++ K+++IR+T+LQM DR Y V+ EL + + F+ FG+ R + + Sbjct: 3 DEEELYKMWRIRKTVLQMCHDRGYLVTQEELDQTLQGFQEIFGDRPSENCPSRADITLLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM E+ R I+V Q +P A+ A+ Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKDIKRYCLRMQEESIYRAIIVVQNSITPSARQAL 118 [74][TOP] >UniRef100_B5E0K0 GA24393 n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=B5E0K0_DROPS Length = 210 Score = 77.0 bits (188), Expect = 1e-12 Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208 D+E++ K+++IR+T+LQM DR Y V+ EL + + F+ FG+ R + + Sbjct: 3 DEEELYKMWRIRKTVLQMCHDRGYLVTQEELDQTLQGFQEIFGDRPSENCPSRADITLLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF E K+G+ +K RM E+ R I+V Q +P A+ A+ Sbjct: 63 AHNDDPTDQMFVFFPQEPKVGIKDIKRYCLRMQEESIYRAIIVVQNSITPSARQAL 118 [75][TOP] >UniRef100_Q54EH2 DNA-directed RNA polymerases I, II, and III subunit rpabc1 n=1 Tax=Dictyostelium discoideum RepID=RPAB1_DICDI Length = 197 Score = 77.0 bits (188), Expect = 1e-12 Identities = 45/121 (37%), Positives = 66/121 (54%) Frame = -3 Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187 ED+ +L +IR+T+LQML+DR Y ++ E R+ F S RE L + KDDP+ Sbjct: 2 EDINRLLQIRKTVLQMLSDREYIITAYEQEYPRESFVS-------RENLTMYCVKKDDPT 54 Query: 186 ERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRL 7 + + VFF D K+GV +K + M R I+V Q+ +P AK A+A F+ L Sbjct: 55 DSIYVFFPDTPKVGVTQIKKYVDIMKDRQANRAIIVVQQNITPFAKQALAEFSQEKKITL 114 Query: 6 E 4 E Sbjct: 115 E 115 [76][TOP] >UniRef100_Q98RN7 RNA polymerase I, II and III 24.3 kDa subunit n=1 Tax=Guillardia theta RepID=Q98RN7_GUITH Length = 214 Score = 75.5 bits (184), Expect = 3e-12 Identities = 40/124 (32%), Positives = 74/124 (59%), Gaps = 8/124 (6%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDT--ELSMSRKDFKSEFGEHFR--REQLEIQKT 205 DD+++ L+K+RRT+LQM+ DR Y V D+ +L++SR F+ + ++ R+ LEI++ Sbjct: 3 DDKNIQHLFKVRRTVLQMIRDRGYVVFDSKDDLNISRSSFEEFYMKNHAICRKSLEIKRP 62 Query: 204 HKDDPSERVCVFFF----DEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37 D+P R+ + F D+ +GV ++ R+ E F+R +++ +P AK AV+ Sbjct: 63 RWDNPENRILIVFVEGEKDKMNIGVKSIRLFCERIKNEGFSRVLMILNGKLTPHAKQAVS 122 Query: 36 TFNN 25 + N+ Sbjct: 123 SINS 126 [77][TOP] >UniRef100_A8QAC6 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8QAC6_MALGO Length = 159 Score = 74.7 bits (182), Expect = 5e-12 Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 2/113 (1%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEH--FRREQLEIQKTHK 199 DD + +L+++ RTI +++ADR Y VS+ EL++ FK+E + R ++ HK Sbjct: 3 DDRETARLWRVNRTIHELVADRGYEVSEEELNVDLDTFKAEVTSNGIVDRNRMNFFTQHK 62 Query: 198 DDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 D P ER+ VF+ E +GV ++ N + +N TRGI++ + AK + Sbjct: 63 DKPEERLFVFYSTERNVGVKTMRQFINILEEKNITRGIIIWSDKMTSAAKKVI 115 [78][TOP] >UniRef100_Q9FJL8 RNA polymerase I, II and III 24.3 kDa subunit-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9FJL8_ARATH Length = 210 Score = 73.9 bits (180), Expect = 9e-12 Identities = 36/118 (30%), Positives = 72/118 (61%), Gaps = 4/118 (3%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE---HFRREQLEIQKTHK 199 D+++T+++K+RRT+LQML DR Y++ +++L++ R++F F + +E L + Sbjct: 5 DDEITRIFKVRRTVLQMLRDRGYTIEESDLNLKREEFVQRFCKTMNKVNKEALFVSANKG 64 Query: 198 DDPSERVCVFFFDEAKLGVGVV-KSITNRMGTENFTRGILVCQKPFSPQAKTAVATFN 28 +P++++ VF+ + K+GV V+ K + +M + RGI+V + A+ AV+ N Sbjct: 65 PNPADKIYVFYPEGPKVGVPVIKKEVAIKMRDDKVHRGIVVVPMAITAPARMAVSELN 122 [79][TOP] >UniRef100_B8C1Q1 RPB5,-like protein to RNA polymerase i n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C1Q1_THAPS Length = 226 Score = 73.2 bits (178), Expect = 1e-11 Identities = 40/108 (37%), Positives = 63/108 (58%) Frame = -3 Query: 363 DVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSE 184 + ++L+++ +T+ ML+ R Y VS M+ DF FGE+ RE L I DD + Sbjct: 27 EASRLFRVYKTVSAMLSKRGYMVSREMREMTPFDFTQRFGEYPSREGLTILVEKADDETN 86 Query: 183 RVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 ++ VFF ++ K+GV +K +T+RM EN + ILV + +P AK AV Sbjct: 87 QLFVFFPEDEKVGVKPIKILTDRMKDENVSNAILVLRGDITPFAKQAV 134 [80][TOP] >UniRef100_B5DLP1 GA22581 n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=B5DLP1_DROPS Length = 320 Score = 73.2 bits (178), Expect = 1e-11 Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 5/116 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208 D+ +V KL+ IR+T+ +M DR Y V+ EL + + F FG+ R L + Sbjct: 3 DEAEVYKLWHIRKTLFEMSHDRGYLVTSAELDQTVEQFTELFGDKPSEQSPMRSDLTMLL 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 +H DDP R+ VFF +E K+ V +K+ +RM E R ILV + +P AK ++ Sbjct: 63 SHADDPKNRMLVFFPEEPKVAVKTIKAYAHRMEGEGIHRAILVVRDCLTPPAKQSI 118 [81][TOP] >UniRef100_B9IHS9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IHS9_POPTR Length = 216 Score = 72.8 bits (177), Expect = 2e-11 Identities = 45/119 (37%), Positives = 69/119 (57%), Gaps = 4/119 (3%) Frame = -3 Query: 375 FDDEDVT---KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKT 205 F DE T + Y RRT+L+ML DR YSV +E+ +S +DF+ +G++ E L+ T Sbjct: 11 FVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIELLKFSAT 70 Query: 204 HKDDPSERVCVFFFDEAKLGVGVVKSITNRM-GTENFTRGILVCQKPFSPQAKTAVATF 31 HK DPS+R+ V F + VG+++ IT ++ ++ T ILV Q + QA A+ F Sbjct: 71 HKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQAMKALDLF 129 [82][TOP] >UniRef100_Q8ID59 DNA-directed RNA polymerase 2, putative n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8ID59_PLAF7 Length = 205 Score = 72.8 bits (177), Expect = 2e-11 Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 2/112 (1%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193 ++ VT+ YK R+T +ML DR Y ++ E + FK F ++ R R ++ I THK+D Sbjct: 2 EDPVTRFYKCRKTCCEMLEDRGYIMTPREKLENFSTFKEMFEDNDRQRSKMGISTTHKND 61 Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 + R+ V+F DE K GV ++ +T RM ++ R ILV Q +P A+ A+ Sbjct: 62 SNNRIIVYFADEVKKTGVKPLRELTERMEEKSIQRAILVTQNILTPFARDAI 113 [83][TOP] >UniRef100_B3L6X3 DNA-directed RNA polymerase 2, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L6X3_PLAKH Length = 205 Score = 72.0 bits (175), Expect = 3e-11 Identities = 38/112 (33%), Positives = 66/112 (58%), Gaps = 2/112 (1%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193 ++ +T+ YK R+T +ML DR Y ++ E + FK +F E+ + R ++ I +HK+D Sbjct: 2 EDPITRFYKCRKTCCEMLEDRGYVITPREKLENFATFKEQFEENEKLRSRMTIITSHKND 61 Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 S ++ V+F DE K GV ++ +T +M ++ R ILV Q +P A+ A+ Sbjct: 62 ESNKIIVYFADETKKTGVKPLRELTEKMDEKSIQRAILVTQNTLTPFARDAI 113 [84][TOP] >UniRef100_A7RT72 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RT72_NEMVE Length = 207 Score = 72.0 bits (175), Expect = 3e-11 Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 6/117 (5%) Frame = -3 Query: 372 DDEDVT-KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQ 211 DD D+T K ++IR+T++Q+ N + EL + + FK +FG+ R L I Sbjct: 2 DDTDLTYKFWRIRKTVMQVC---NGLILRDELDKTLEQFKEQFGDRPSEGRPSRSDLSIL 58 Query: 210 KTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 H DDP++++ VFF +E K+G+ +K RM EN +R ++V Q +P AK A+ Sbjct: 59 VAHNDDPTDQMFVFFPEEPKVGIKTIKQYCQRMQEENISRAVIVVQLGMTPSAKQAL 115 [85][TOP] >UniRef100_C5KB88 DNA-directed RNA polymerases II 24 kDa polypeptide, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KB88_9ALVE Length = 213 Score = 71.2 bits (173), Expect = 6e-11 Identities = 39/115 (33%), Positives = 71/115 (61%), Gaps = 5/115 (4%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRRE----QLEIQKTH 202 D+ +L+++R+TI ++L DR Y V+ L+ +++ F ++ E R+ L I + Sbjct: 7 DDTTIRLWRVRKTIFELLQDRGYVVAQKYLNETKESFAQQWNEIQERKGGRHDLIILVSK 66 Query: 201 KDDPSERVCVFFFDEAK-LGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 +DDPS+++ VFF DE K +GV ++++ +M + +R ILV Q+P + AKTA+ Sbjct: 67 QDDPSDQLIVFFPDENKRVGVKPIRTLALKMEEQRLSRAILVVQQPLTAFAKTAI 121 [86][TOP] >UniRef100_C5KHW9 DNA-directed RNA polymerases II 24 kDa polypeptide, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KHW9_9ALVE Length = 213 Score = 70.9 bits (172), Expect = 7e-11 Identities = 41/115 (35%), Positives = 73/115 (63%), Gaps = 6/115 (5%) Frame = -3 Query: 366 EDVT-KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRRE----QLEIQKTH 202 +DVT +L+++R+TI ++L DR Y V+ L+ +++ F ++ E R+ L I + Sbjct: 7 DDVTIRLWRVRKTIFELLQDRGYLVAQKYLNETKESFAQQWNEIQERKGGRHDLIILVSK 66 Query: 201 KDDPSERVCVFFFDEAK-LGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 +DDPS+++ VFF DE K +GV ++++ +M + +R ILV Q+P + AKTA+ Sbjct: 67 QDDPSDQLIVFFPDENKRVGVKPIRTLALKMEEQRLSRAILVVQQPLTAFAKTAI 121 [87][TOP] >UniRef100_A5K2Q3 DNA-directed RNA polymerase II 23 kDa polypeptide, putative n=1 Tax=Plasmodium vivax RepID=A5K2Q3_PLAVI Length = 205 Score = 70.5 bits (171), Expect = 1e-10 Identities = 37/112 (33%), Positives = 66/112 (58%), Gaps = 2/112 (1%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193 ++ +T+ YK R+T +ML DR Y ++ E + FK +F E+ + R ++ I +HK+D Sbjct: 2 EDPITRFYKCRKTCCEMLEDRGYIITPREKLENFATFKEQFEENEKLRSRMTIITSHKND 61 Query: 192 PSERVCVFFFDE-AKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 + ++ V+F DE K GV ++ +T +M ++ R ILV Q +P A+ A+ Sbjct: 62 ANNKIIVYFADEIKKTGVKPLRELTEKMDEKSIQRAILVTQNTLTPFARDAI 113 [88][TOP] >UniRef100_B6KFE7 DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative n=3 Tax=Toxoplasma gondii RepID=B6KFE7_TOXGO Length = 205 Score = 70.1 bits (170), Expect = 1e-10 Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 8/131 (6%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEH-FRREQLEIQKTHKDD 193 ++ +L++ R+T ML DR Y VS E + S DF F E+ R ++ + +HK D Sbjct: 2 EDSTRRLFRARKTCCDMLQDRGYIVSAQEKNESWNDFLQRFKENECNRSRMLLIASHKVD 61 Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA------T 34 P RV V+F DE K GV ++ +T RM N R ILV Q + A+ A++ Sbjct: 62 PDNRVIVYFADETKKTGVKPIRELTERMEERNIQRAILVTQNVLTAFARDAISEAAPRHI 121 Query: 33 FNNFSASRLEV 1 NF S L V Sbjct: 122 IENFMESELLV 132 [89][TOP] >UniRef100_B7FSY0 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FSY0_PHATR Length = 228 Score = 69.7 bits (169), Expect = 2e-10 Identities = 37/108 (34%), Positives = 60/108 (55%) Frame = -3 Query: 363 DVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSE 184 + +L+++ RTI ML R Y V T ++ FK FGE+ RE L I DD + Sbjct: 29 EAARLFRVYRTIANMLDKRGYMVPKTLREITPSAFKERFGEYPSRENLTILVEKADDDTN 88 Query: 183 RVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 ++ +FF ++ K+GV +K T+RM E+ + I++ + +P AK AV Sbjct: 89 QLFIFFPEDEKVGVKPIKVYTDRMRAESVSNAIIILRVDITPFAKQAV 136 [90][TOP] >UniRef100_B6AE06 DNA-directed RNA polymerase 2, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AE06_9CRYT Length = 205 Score = 69.7 bits (169), Expect = 2e-10 Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 2/112 (1%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193 D T+ ++ RRT+ +ML DR Y VS + FK F H R R ++ + +HK D Sbjct: 2 DNSDTRFFRARRTLCEMLEDRGYIVSSQDKDEQFATFKERFESHQRLRSRMLMVASHKQD 61 Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 ++R+ +F DE+ K GV ++ I +M N R IL+ Q + AK A+ Sbjct: 62 QTKRIICYFADESKKTGVKPIRDIVEKMDEHNIQRAILISQNVLTAHAKVAI 113 [91][TOP] >UniRef100_Q9M1J2 Putative uncharacterized protein F24I3.160 n=1 Tax=Arabidopsis thaliana RepID=Q9M1J2_ARATH Length = 222 Score = 68.2 bits (165), Expect = 5e-10 Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 1/114 (0%) Frame = -3 Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187 E+ + Y RR LQML DR Y VSD ++++S DF++ +GE ++L I H+ D + Sbjct: 23 EESHRYYLARRNGLQMLRDRGYEVSDEDINLSLHDFRTVYGERPDVDRLRISALHRSDST 82 Query: 186 ERVCVFFFDEAKLGVGVVKS-ITNRMGTENFTRGILVCQKPFSPQAKTAVATFN 28 ++V + FF + + V ++S + + + E T ILV Q + QA A+ F+ Sbjct: 83 KKVKIVFFGTSMVKVNAIRSVVADILSQETITGLILVLQNHVTNQALKAIELFS 136 [92][TOP] >UniRef100_A9BK88 Rpabc5 n=1 Tax=Cryptophyta RepID=A9BK88_9CRYP Length = 216 Score = 68.2 bits (165), Expect = 5e-10 Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 8/127 (6%) Frame = -3 Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSV--SDTELSMSRKDFKSEFGEHFR--REQLEI 214 M D +++ L+KIRRTILQML DR+Y V + +L MSR F+ +F ++F+ R +LEI Sbjct: 1 METDYKEILNLFKIRRTILQMLRDRSYVVFENQDDLEMSRSSFEQKFVKNFQVIRSELEI 60 Query: 213 QKTHKDDPSERVCVFFFDEAK----LGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKT 46 ++ + + R+ V F + K +GV ++ R+ + F I+V + AK Sbjct: 61 NRSKWLEENMRILVVFIEGEKEKSAIGVKSIRGFCERIKQDGFQNSIIVLHGKLTSHAKQ 120 Query: 45 AVATFNN 25 A+ + N+ Sbjct: 121 AINSINS 127 [93][TOP] >UniRef100_A8NU15 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NU15_COPC7 Length = 273 Score = 68.2 bits (165), Expect = 5e-10 Identities = 36/126 (28%), Positives = 70/126 (55%), Gaps = 3/126 (2%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR---REQLEIQKTH 202 D ++ +L+K+ +TI +++ DR +SVSD E++MS + F+ +G + R QL H Sbjct: 68 DGDETARLWKVSKTIHELVKDRGFSVSDEEINMSLERFRQVYGNNMGVIDRNQLNFYTHH 127 Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNF 22 + +PS+++ V+F +E +GV ++ + M + RGI++ + A+ ++ Sbjct: 128 RLNPSDQIFVYFTEEPNVGVKAMRKLLGIMEEKAIQRGIIIFPATMTSSARKVISAM--A 185 Query: 21 SASRLE 4 S RLE Sbjct: 186 STYRLE 191 [94][TOP] >UniRef100_Q9ZVB9 Putative DNA-directed RNA polymerase 23kD subunit n=1 Tax=Arabidopsis thaliana RepID=Q9ZVB9_ARATH Length = 218 Score = 66.6 bits (161), Expect = 1e-09 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 6/115 (5%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 K Y RRT ++ML DR Y VSD ++++S + F++ +GEH + L I H+ D S+++ Sbjct: 23 KYYLARRTTMEMLRDRGYDVSDEDINLSLQQFRALYGEHPDVDLLRISAKHRFDSSKKIS 82 Query: 174 VFFFDEAKLGVGVVKSITNR------MGTENFTRGILVCQKPFSPQAKTAVATFN 28 V F G G+VK R + EN T ILV Q + QA AV F+ Sbjct: 83 VVF-----CGTGIVKVNAMRVIAADVLSRENITGLILVLQSHITNQALKAVELFS 132 [95][TOP] >UniRef100_Q8L947 Putative DNA-directed RNA polymerase 23kD subunit n=1 Tax=Arabidopsis thaliana RepID=Q8L947_ARATH Length = 222 Score = 66.6 bits (161), Expect = 1e-09 Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 1/114 (0%) Frame = -3 Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187 E+ + Y RR LQ+L DR Y VSD ++++S DF++ +GE ++L I H+ D + Sbjct: 23 EESHRYYLARRNGLQILRDRGYEVSDEDINLSLHDFRTVYGERPDVDRLRISALHRSDST 82 Query: 186 ERVCVFFFDEAKLGVGVVKS-ITNRMGTENFTRGILVCQKPFSPQAKTAVATFN 28 ++V + FF + + V ++S + + + E T ILV Q + QA A+ F+ Sbjct: 83 KKVKIVFFGTSMVKVNAIRSVVADILSQETITGLILVLQNHVTNQALKAIELFS 136 [96][TOP] >UniRef100_Q8CI23 Polymerase (RNA) II (DNA directed) polypeptide E n=1 Tax=Mus musculus RepID=Q8CI23_MOUSE Length = 96 Score = 66.2 bits (160), Expect = 2e-09 Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKS 127 H DDP++++ VFF EA GVV S Sbjct: 63 AHNDDPTDQMFVFFPGEALGLAGVVSS 89 [97][TOP] >UniRef100_B4GWF6 GL16452 n=1 Tax=Drosophila persimilis RepID=B4GWF6_DROPE Length = 126 Score = 66.2 bits (160), Expect = 2e-09 Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 5/104 (4%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208 D+ ++ KL+ IR+T+ +M DR Y V+ EL + + F FG+ R L + Sbjct: 7 DEAEIYKLWHIRKTVFEMSHDRGYLVTQGELDQTVEQFTELFGDKPSEQRPMRSDLTMVL 66 Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVC 76 TH DDP R+ VFF +E K+ V +K+ NRM F G VC Sbjct: 67 THADDPKNRMLVFFPEEPKVAVRTIKAFANRMRPRTFI-GPSVC 109 [98][TOP] >UniRef100_B9ST46 DNA-directed RNA polymerase II, putative n=1 Tax=Ricinus communis RepID=B9ST46_RICCO Length = 238 Score = 65.9 bits (159), Expect = 2e-09 Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 + Y RRT+L+ML DR YSV +E+ +S ++F++ G + ++L+ TH DPS+R+ Sbjct: 43 RYYLSRRTVLEMLRDRGYSVPSSEIDLSLQEFRAIHGPNPDIDRLKFSATHTSDPSKRML 102 Query: 174 VFFFDEAKLGVGVVKSITNR-MGTENFTRGILVCQKPFSPQAKTAVATF 31 V F + V +++I + + ++ T ILV Q + QA AV F Sbjct: 103 VLFGGPGIIKVSTIRAIAGQIVNKDSLTGLILVLQNQITNQAMKAVDLF 151 [99][TOP] >UniRef100_Q4YN15 DNA-directed RNA polymerase 2, putative (Fragment) n=1 Tax=Plasmodium berghei RepID=Q4YN15_PLABE Length = 107 Score = 65.5 bits (158), Expect = 3e-09 Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 2/106 (1%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193 ++ VT+ YK R+T +ML DR Y ++ E + FK F E+ + R ++ I +HK+D Sbjct: 2 EDPVTRFYKCRKTCCEMLEDRGYIITAREKLENFAAFKELFEENEKLRSRMTIITSHKND 61 Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSP 58 + ++ V+F DE K GV ++ +T +M ++ R ILV Q +P Sbjct: 62 ANNKIIVYFVDEVKKTGVKPLRELTEKMDEKSIQRAILVTQNTLTP 107 [100][TOP] >UniRef100_Q9LKX4 RPB5d n=1 Tax=Brassica napus RepID=Q9LKX4_BRANA Length = 223 Score = 64.3 bits (155), Expect = 7e-09 Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 1/113 (0%) Frame = -3 Query: 363 DVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSE 184 D Y RRT ++ML DR Y +S+ +++++ ++F++ +G+ ++L I H D S+ Sbjct: 24 DSHSYYLARRTTMEMLRDRGYDISNEDINLTLQEFRALYGDRPNVDRLRISAQHCSDSSK 83 Query: 183 RVCVFFFDEAKLGVGVVKSI-TNRMGTENFTRGILVCQKPFSPQAKTAVATFN 28 ++ V F + V ++ I + +G EN T ILV Q + QA AV F+ Sbjct: 84 KIAVVFCGSGIVKVSAIRDIAADVLGRENLTGLILVLQSDITNQALKAVELFS 136 [101][TOP] >UniRef100_Q5CNJ4 DNA-directed RNA polymerase 2 n=2 Tax=Cryptosporidium RepID=Q5CNJ4_CRYHO Length = 205 Score = 63.9 bits (154), Expect = 9e-09 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 2/112 (1%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193 D + ++ RRT+ +ML DR Y VS + FK F H R R ++ + +H+ D Sbjct: 2 DSSDNRFFRARRTLCEMLEDRGYIVSSQDKEEDFSTFKERFESHQRLRSRMLMVASHRQD 61 Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 ++R+ +F DE+ K GV ++ I +M R IL+ Q + AK A+ Sbjct: 62 QTKRIICYFADESKKTGVKPIRDIVEKMDEHAIQRAILISQNVLTAHAKVAI 113 [102][TOP] >UniRef100_B5LZ31 RNA polymerase II (Fragment) n=1 Tax=Psetta maxima RepID=B5LZ31_PSEMX Length = 87 Score = 63.5 bits (153), Expect = 1e-08 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 5/84 (5%) Frame = -3 Query: 285 ELSMSRKDFKSEFGE-----HFRREQLEIQKTHKDDPSERVCVFFFDEAKLGVGVVKSIT 121 EL + +FKS+FG+ RR L + H DDP++++ VFF +E K+G+ +K Sbjct: 3 ELDQTLDEFKSQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKMYC 62 Query: 120 NRMGTENFTRGILVCQKPFSPQAK 49 RM EN TR I+V Q +P AK Sbjct: 63 QRMQEENITRAIIVVQMGMTPSAK 86 [103][TOP] >UniRef100_B0D9Y7 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D9Y7_LACBS Length = 208 Score = 63.2 bits (152), Expect = 2e-08 Identities = 32/114 (28%), Positives = 63/114 (55%), Gaps = 3/114 (2%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEH---FRREQLEIQKTH 202 D ++ KL+K+ RTI +++ DR + VSD E+ M + F+S + + R QL T Sbjct: 3 DVDETAKLWKVNRTIHELVKDRGFLVSDDEIHMDLQRFRSLYANNSGVVDRNQLNFYTTS 62 Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 + + ++++ VFF +E +GV ++ + + ++ RGI+V +P A+ + Sbjct: 63 RTNSTDQIFVFFSEEKSVGVKTMRKLLGILEEKSIQRGIIVFPGNMTPSARKVI 116 [104][TOP] >UniRef100_Q757H7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1 Tax=Eremothecium gossypii RepID=RPAB1_ASHGO Length = 215 Score = 63.2 bits (152), Expect = 2e-08 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 14/138 (10%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEI------- 214 ++ +V++L++ RT+ +M+ DR Y ++ E+ +S +DFK+++ + R Q ++ Sbjct: 5 NERNVSRLWRAFRTVKEMVRDRGYFITQEEVDLSLEDFKAKYCDSMGRPQRKMMSFQSNP 64 Query: 213 -QKTHKDDPS-ERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQA---- 52 ++T K P+ V V F DE +G+ +K+ +G +NF GI + Q +P A Sbjct: 65 TEETLKKSPNMGSVWVEFCDEPSVGIKTMKNFVIHIGEKNFQTGIFIYQNGITPSALKLL 124 Query: 51 -KTAVATFNNFSASRLEV 1 A AT F+ + L V Sbjct: 125 PSVAPATIETFNETALVV 142 [105][TOP] >UniRef100_Q4P7S7 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P7S7_USTMA Length = 554 Score = 62.8 bits (151), Expect = 2e-08 Identities = 30/114 (26%), Positives = 62/114 (54%), Gaps = 3/114 (2%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEF---GEHFRREQLEIQKTH 202 DD + +L+++ RTI +++ DR Y V+D E+S+ + FK+E+ G R +L H Sbjct: 3 DDRETVRLWRVNRTIHELVRDRGYQVADDEISVDLETFKAEYAPTGGSVDRNKLNFFTEH 62 Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 + ++R+ VF+ + +GV ++ + M + RGI++ + + A+ + Sbjct: 63 GEHENQRLFVFYSSDRNVGVKTMRQFISIMEERDIQRGIIIWPEKMTSAARKVI 116 [106][TOP] >UniRef100_A7QJL2 Chromosome chr8 scaffold_106, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7QJL2_VITVI Length = 229 Score = 62.4 bits (150), Expect = 3e-08 Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 1/119 (0%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 + Y RRT+L+ML DR YS+ ++ +S +DF+S + + ++L I + DPS+++ Sbjct: 34 RYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLRISAALRSDPSKKIL 93 Query: 174 VFFFDEAKLGVGVVKSI-TNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRLEV 1 V F + V ++SI T + ++ ++ ILV Q + QA AV F +F + ++ Sbjct: 94 VIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAVDLF-SFQVEKFQI 151 [107][TOP] >UniRef100_A2Q2Z5 RNA polymerase subunit, RPB5; RNA polymerase Rpb5, N-terminal n=1 Tax=Medicago truncatula RepID=A2Q2Z5_MEDTR Length = 248 Score = 62.0 bits (149), Expect = 3e-08 Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 1/106 (0%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 + Y RRT+L+ML DR YS+ E+ +S DF+ G+ ++L + TH +PS+R+ Sbjct: 53 RYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLRLTATHATNPSKRIL 112 Query: 174 VFFFDEAKLGVGVVKSITNR-MGTENFTRGILVCQKPFSPQAKTAV 40 V F + V V+ I + + E+ T IL+ Q + QA AV Sbjct: 113 VVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKAV 158 [108][TOP] >UniRef100_A9UR01 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UR01_MONBE Length = 210 Score = 60.8 bits (146), Expect = 8e-08 Identities = 34/112 (30%), Positives = 65/112 (58%), Gaps = 1/112 (0%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRRE-QLEIQKTHKD 196 D+ + +LYK+ T+ QM DR + V+ ++M+ + +GE+ R+E +QK D Sbjct: 3 DEAERYRLYKVWITLKQMCHDRGFRVTQEMMNMTFDTWNEIYGEYPRKELSFPVQKV--D 60 Query: 195 DPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 D ++ + VFF + + V +KS+ +R+ ++N R I+V Q+ +P AK+ + Sbjct: 61 DDNDGLFVFFPESPDVKVAAIKSLYDRLKSDNLRRAIIVYQRKVAPVAKSHI 112 [109][TOP] >UniRef100_A7APR4 RNA polymerase Rpb5, N-terminal domain containing protein n=1 Tax=Babesia bovis RepID=A7APR4_BABBO Length = 205 Score = 59.7 bits (143), Expect = 2e-07 Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 2/112 (1%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193 D++ +L++ RRT +ML DR Y + + E + +FK+ + + R R ++ + + K D Sbjct: 2 DDEEGRLFRCRRTCCEMLEDRGYFIPNQERLETFAEFKARYELYDRVRSKMLLVASLKTD 61 Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 ++ V+F DE K GV ++ +T +M + R ILV Q +P AK A+ Sbjct: 62 KDAKLLVYFADETKKTGVKPIRELTEKMEDHDIHRAILVTQNVLTPFAKDAI 113 [110][TOP] >UniRef100_UPI0001985D3D PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001985D3D Length = 1260 Score = 59.3 bits (142), Expect = 2e-07 Identities = 34/105 (32%), Positives = 55/105 (52%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 + Y RRT+ QML+DR Y+V +EL+ S DF++ FG + +L I PS+++ Sbjct: 27 RYYLSRRTLFQMLSDRGYNVPHSELTRSLSDFRASFGHNPDPSRLRICLPLISSPSKKIL 86 Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 V F ++ V++ I ++ E R ILV Q + A+ V Sbjct: 87 VVFCGTDEIRKAVIRVIFQQINREGLHRLILVLQSKMNSHARKVV 131 [111][TOP] >UniRef100_A7Q5P2 Chromosome undetermined scaffold_53, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7Q5P2_VITVI Length = 221 Score = 59.3 bits (142), Expect = 2e-07 Identities = 34/105 (32%), Positives = 55/105 (52%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 + Y RRT+ QML+DR Y+V +EL+ S DF++ FG + +L I PS+++ Sbjct: 27 RYYLSRRTLFQMLSDRGYNVPHSELTRSLSDFRASFGHNPDPSRLRICLPLISSPSKKIL 86 Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 V F ++ V++ I ++ E R ILV Q + A+ V Sbjct: 87 VVFCGTDEIRKAVIRVIFQQINREGLHRLILVLQSKMNSHARKVV 131 [112][TOP] >UniRef100_C5DNB3 KLTH0G15598p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DNB3_LACTC Length = 215 Score = 58.9 bits (141), Expect = 3e-07 Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 14/138 (10%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193 ++ +V++L++ +T+ +M+ DR Y ++ E+ +S +DFK+++ + R Q ++ + Sbjct: 5 NERNVSRLWRAFKTVKEMVRDRGYFITQEEVDLSLEDFKAKYCDSMGRPQRKMMSFQSNP 64 Query: 192 PSERVCVF---------FFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQA---- 52 E + F F DEA +G+ +K+ + +NF GI V Q +P A Sbjct: 65 VEEALEKFPNMGSLWVEFCDEASVGIKTMKNFVIHISEKNFQTGIFVYQNGVTPSAMKLL 124 Query: 51 -KTAVATFNNFSASRLEV 1 A AT F + L V Sbjct: 125 PSVAPATIETFHEASLVV 142 [113][TOP] >UniRef100_UPI00004E3EE0 RNA polymerase II core subunit n=1 Tax=Dictyostelium discoideum AX4 RepID=UPI00004E3EE0 Length = 181 Score = 58.5 bits (140), Expect = 4e-07 Identities = 37/106 (34%), Positives = 53/106 (50%) Frame = -3 Query: 321 MLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVCVFFFDEAKLGV 142 ML+DR Y ++ E R+ F S RE L + KDDP++ + VFF D K+GV Sbjct: 1 MLSDREYIITAYEQEYPRESFVS-------RENLTMYCVKKDDPTDSIYVFFPDTPKVGV 53 Query: 141 GVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRLE 4 +K + M R I+V Q+ +P AK A+A F+ LE Sbjct: 54 TQIKKYVDIMKDRQANRAIIVVQQNITPFAKQALAEFSQEKKITLE 99 [114][TOP] >UniRef100_Q9M1H8 RNA polymerase 24kDa subunit-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M1H8_ARATH Length = 233 Score = 58.2 bits (139), Expect = 5e-07 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 4/112 (3%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 + Y R T +ML DR Y V++ ELS++ +F+S FGE E+L I + DP +++ Sbjct: 38 RFYLARTTAFEMLRDRGYEVNEAELSLTLSEFRSVFGEKPELERLRICVPLRSDPKKKIL 97 Query: 174 VFFFDEAKLGVGVVKS----ITNRMGTENFTRGILVCQKPFSPQAKTAVATF 31 V F + V V++ I+N +G ILV Q + A+ A+ TF Sbjct: 98 VVFMGTEPITVKSVRALHIQISNNVGLHAM---ILVLQSKMNHFAQKALTTF 146 [115][TOP] >UniRef100_P20434 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=5 Tax=Saccharomyces cerevisiae RepID=RPAB1_YEAST Length = 215 Score = 58.2 bits (139), Expect = 5e-07 Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 14/138 (10%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193 ++ ++++L++ RT+ +M+ DR Y ++ E+ + +DFK+++ + R Q ++ + Sbjct: 5 NERNISRLWRAFRTVKEMVKDRGYFITQEEVELPLEDFKAKYCDSMGRPQRKMMSFQANP 64 Query: 192 PSERVCVF---------FFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 E + F F DE +GV +K+ + +NF GI V Q +P A V Sbjct: 65 TEESISKFPDMGSLWVEFCDEPSVGVKTMKTFVIHIQEKNFQTGIFVYQNNITPSAMKLV 124 Query: 39 -----ATFNNFSASRLEV 1 AT F+ + L V Sbjct: 125 PSIPPATIETFNEAALVV 142 [116][TOP] >UniRef100_Q4N141 DNA-directed RNA polymerase II, putative n=1 Tax=Theileria parva RepID=Q4N141_THEPA Length = 205 Score = 57.8 bits (138), Expect = 6e-07 Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 2/112 (1%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193 D++ +L++ RRT +ML DR Y + E + +FK+ + H + R ++ + + + Sbjct: 2 DDEEGRLFRCRRTCCEMLEDRGYFIPVQEKLETFAEFKARYEMHEKVRSKMLLVASQRTA 61 Query: 192 PSERVCVFFFDE-AKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 ++ V+F DE K GV ++ +T RM + R ILV Q +P AK A+ Sbjct: 62 SENKLLVYFADEKKKTGVKPIRELTERMEDHDIHRAILVTQNVLTPFAKDAI 113 [117][TOP] >UniRef100_C4YG42 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Candida albicans RepID=C4YG42_CANAL Length = 214 Score = 57.8 bits (138), Expect = 6e-07 Identities = 33/121 (27%), Positives = 65/121 (53%), Gaps = 9/121 (7%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199 D V++L++ +T+ +M+ DR Y +S EL M+ ++F+S+ + +R+Q+ Q T Sbjct: 5 DRAVSRLFRSFKTVKEMVRDRGYYISQEELDMTLEEFRSKICDSMGTPQRKQMCFQATPT 64 Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37 + E+ + V F DEA +G+ +++ + +NF+ GI + Q +P A + Sbjct: 65 AETLEKFPETGSLWVEFCDEASVGIKTMRNFCIHITEKNFSTGIFIYQNSMTPSANKLIP 124 Query: 36 T 34 T Sbjct: 125 T 125 [118][TOP] >UniRef100_A3GI06 DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase II subunit 5) n=1 Tax=Pichia stipitis RepID=A3GI06_PICST Length = 213 Score = 57.8 bits (138), Expect = 6e-07 Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193 DD V++L++ +T+ +M+ DR Y ++ E+ MS +F+++ + R Q ++ + Sbjct: 3 DDRTVSRLFRSFKTVKEMVRDRGYYITQEEVDMSLDEFRAKICDSMGRPQRKLMCFQANP 62 Query: 192 PSERVCVF---------FFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 +E + F F DEA +G+ +++ + +NF+ GI + Q +P A + Sbjct: 63 TAESLDKFPDLGSLWVEFCDEASVGIKTMRNFCIHISEKNFSTGIFIYQNSITPSANKLI 122 Query: 39 AT 34 T Sbjct: 123 PT 124 [119][TOP] >UniRef100_Q6CJ62 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1 Tax=Kluyveromyces lactis RepID=RPAB1_KLULA Length = 215 Score = 57.4 bits (137), Expect = 8e-07 Identities = 30/121 (24%), Positives = 65/121 (53%), Gaps = 9/121 (7%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199 + ++++L++ +T+ +M+ DR Y ++ E+ +S +DFK+++ + +R+ + Q Sbjct: 6 ERNISRLWRAFKTVKEMVRDRGYFITQEEIDLSLEDFKAKYCDSMGKPQRKMMSFQSNPT 65 Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37 ++ E+ + V F DEA +GV +K+ + +NF GI + Q +P A + Sbjct: 66 EESIEKFPEMGSLWVEFCDEASVGVKTMKNFVVHITEKNFQTGIFIYQSGITPSANKILP 125 Query: 36 T 34 T Sbjct: 126 T 126 [120][TOP] >UniRef100_Q2RAP1 Os11g0143400 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2RAP1_ORYSJ Length = 227 Score = 57.0 bits (136), Expect = 1e-06 Identities = 31/111 (27%), Positives = 58/111 (52%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 +L+ RRT ++ML DR YSV + E++ + +F++ + E E+L T DPS++V Sbjct: 32 RLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLAFTTTLVSDPSKKVQ 91 Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNF 22 + F + + ++ I + EN +R +L+ Q +A+ A+ F Sbjct: 92 LVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIKEIFKF 142 [121][TOP] >UniRef100_Q2QXY2 RNA polymerase Rpb5, N-terminal domain containing protein, expressed n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXY2_ORYSJ Length = 335 Score = 57.0 bits (136), Expect = 1e-06 Identities = 31/111 (27%), Positives = 58/111 (52%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 +L+ RRT ++ML DR YSV + E++ + +F++ + E E+L T DPS++V Sbjct: 140 RLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLAFTTTLVSDPSKKVQ 199 Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNF 22 + F + + ++ I + EN +R +L+ Q +A+ A+ F Sbjct: 200 LVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIKEIFKF 250 [122][TOP] >UniRef100_Q0IQ77 Os12g0139500 protein n=2 Tax=Oryza sativa RepID=Q0IQ77_ORYSJ Length = 227 Score = 57.0 bits (136), Expect = 1e-06 Identities = 31/111 (27%), Positives = 58/111 (52%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 +L+ RRT ++ML DR YSV + E++ + +F++ + E E+L T DPS++V Sbjct: 32 RLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLAFTTTLVSDPSKKVQ 91 Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNF 22 + F + + ++ I + EN +R +L+ Q +A+ A+ F Sbjct: 92 LVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIKEIFKF 142 [123][TOP] >UniRef100_A2ZBC5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=A2ZBC5_ORYSI Length = 227 Score = 57.0 bits (136), Expect = 1e-06 Identities = 31/111 (27%), Positives = 58/111 (52%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 +L+ RRT ++ML DR YSV + E++ + +F++ + E E+L T DPS++V Sbjct: 32 RLFLARRTAMEMLRDRGYSVPEAEIARTPPEFRAWWAEKPGIERLAFTTTLVSDPSKKVQ 91 Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNF 22 + F + + ++ I + EN +R +L+ Q +A+ A+ F Sbjct: 92 LVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIKEIFKF 142 [124][TOP] >UniRef100_B9W9S0 DNA-directed RNA polymerases I, II and III subunit, putative n=1 Tax=Candida dubliniensis CD36 RepID=B9W9S0_CANDC Length = 214 Score = 57.0 bits (136), Expect = 1e-06 Identities = 32/121 (26%), Positives = 65/121 (53%), Gaps = 9/121 (7%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199 D V++L++ +T+ +M+ DR Y +S EL M+ ++F+S+ + +R+Q+ Q T Sbjct: 5 DRAVSRLFRSFKTVKEMVRDRGYYISQEELDMTLEEFRSKICDSMGTPQRKQMCFQATPT 64 Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37 + E+ + V F DE+ +G+ +++ + +NF+ GI + Q +P A + Sbjct: 65 GETLEKFPETGSLWVEFCDESSVGIKTMRNFCIHITEKNFSTGIFIYQNSMTPSANKLIP 124 Query: 36 T 34 T Sbjct: 125 T 125 [125][TOP] >UniRef100_UPI0001B7AB22 UPI0001B7AB22 related cluster n=1 Tax=Rattus norvegicus RepID=UPI0001B7AB22 Length = 79 Score = 56.6 bits (135), Expect = 1e-06 Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 7/76 (9%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQ--MLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEI 214 D+E+ +L+KIR+TI+Q + DR Y V+ EL + ++FK++FG+ RR L + Sbjct: 3 DEEETYRLWKIRKTIMQATLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV 62 Query: 213 QKTHKDDPSERVCVFF 166 H DDP++++ VFF Sbjct: 63 LVAHNDDPTDQMFVFF 78 [126][TOP] >UniRef100_C5Y4H1 Putative uncharacterized protein Sb05g002600 n=1 Tax=Sorghum bicolor RepID=C5Y4H1_SORBI Length = 263 Score = 56.6 bits (135), Expect = 1e-06 Identities = 31/105 (29%), Positives = 56/105 (53%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 +L+ RRT L+ML DR Y+V + EL+ + +F++ + + E+L T DPS +V Sbjct: 68 RLFLARRTALEMLRDRGYAVPEDELARTLPEFRAWWEDKPELERLAFSTTLASDPSSKVK 127 Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 V F + + ++ + + EN +R IL+ Q +A+ A+ Sbjct: 128 VVFCPPEPVKIAAIRVVYTGVKDENLSRLILILQGRIMSKAREAI 172 [127][TOP] >UniRef100_C5DR69 ZYRO0B06006p n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DR69_ZYGRC Length = 215 Score = 56.6 bits (135), Expect = 1e-06 Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 14/138 (10%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193 ++ ++++L++ +T+ +M+ DR Y ++ E+ + +DFK+++ + R Q ++ + Sbjct: 5 NERNISRLWRTFKTVKEMVKDRGYFIAQEEIELPLEDFKAKYCDSMGRPQRKMMSFQSNP 64 Query: 192 PSERVCVF---------FFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 E + F F DE +GV +K+ + +NF GI V Q +P A V Sbjct: 65 TEESIAKFPSMGSLWVEFCDEPTVGVKTMKTFVIHIQEKNFQTGIFVYQNNVTPSAMKLV 124 Query: 39 -----ATFNNFSASRLEV 1 AT F + L V Sbjct: 125 PSIPPATIETFHEASLVV 142 [128][TOP] >UniRef100_Q9P4B9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1 Tax=Kluyveromyces marxianus RepID=RPAB1_KLUMA Length = 215 Score = 56.6 bits (135), Expect = 1e-06 Identities = 31/121 (25%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199 + +++L++ RT+ +M+ DR Y ++ E+ +S +DFK ++ + +R+ + Q Sbjct: 6 ERGISRLWRAFRTVKEMVRDRGYFITQEEIDLSLEDFKVKYCDSMGKPQRKMMSFQSNPT 65 Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37 ++ E+ + V F DEA +GV +K+ + +NF GI + Q +P A + Sbjct: 66 EESIEKFPEMGSLWVEFCDEASVGVKTMKNFVVHITEKNFQTGIFIYQSGITPSANKILP 125 Query: 36 T 34 T Sbjct: 126 T 126 [129][TOP] >UniRef100_C6SXN9 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6SXN9_SOYBN Length = 237 Score = 56.2 bits (134), Expect = 2e-06 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 6/115 (5%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 + Y RRT L+ML DR YS+ E+ +S DF+ G+ ++L + TH + S+R+ Sbjct: 42 RYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIHGQFPDPDRLRLSLTHATNSSKRIL 101 Query: 174 VFFFDEAKLGVGVVK--SITNRMG----TENFTRGILVCQKPFSPQAKTAVATFN 28 V F G GVVK +I N G + T IL+ + + QA AV F+ Sbjct: 102 VIF-----CGPGVVKVTAIRNTAGQIINRDTLTGLILIVENHITSQALKAVNLFS 151 [130][TOP] >UniRef100_B6TJI5 DNA-directed RNA polymerase II 23 kDa polypeptide n=1 Tax=Zea mays RepID=B6TJI5_MAIZE Length = 264 Score = 55.8 bits (133), Expect = 2e-06 Identities = 31/118 (26%), Positives = 56/118 (47%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 +L+ RRT L+ML DR Y+V + EL+ + +F++ + E+L T DPS +V Sbjct: 69 RLFLARRTALEMLRDRGYAVPEEELARTLPEFRAWWEYRPELERLAFSTTLASDPSSKVK 128 Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRLEV 1 V F + + ++ I + EN +R IL+ Q + ++ F ++ Sbjct: 129 VVFCPPGPVKIAAIRLIYTEVKDENLSRLILILQGKIMSTTRESIKEIFRFKVDTFQI 186 [131][TOP] >UniRef100_B4FYH9 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B4FYH9_MAIZE Length = 248 Score = 55.8 bits (133), Expect = 2e-06 Identities = 31/118 (26%), Positives = 56/118 (47%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 +L+ RRT L+ML DR Y+V + EL+ + +F++ + E+L T DPS +V Sbjct: 53 RLFLARRTALEMLRDRGYAVPEEELARTLPEFRAWWEYRPELERLAFSTTLTSDPSSKVK 112 Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRLEV 1 V F + + ++ I + EN +R IL+ Q + ++ F ++ Sbjct: 113 VVFCPPGPVKIAAIRLIYTEVKDENLSRLILILQGKIMSTTRESIKEIFRFKVDTFQI 170 [132][TOP] >UniRef100_Q6FQA6 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1 Tax=Candida glabrata RepID=RPAB1_CANGA Length = 215 Score = 55.8 bits (133), Expect = 2e-06 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 14/138 (10%) Frame = -3 Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193 +D +++L++ RT+ +M+ DR Y ++ EL ++ +DFK ++ + R Q ++ + Sbjct: 5 NDRSISRLWRTFRTVKEMVRDRGYFIAQEELDLTLEDFKVKYCDSMGRAQRKMMSFQANP 64 Query: 192 PSERVCVF---------FFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 E + F F DE +GV +K+ + + F GI + Q +P A V Sbjct: 65 TEESMTKFPDMGTLWVEFCDEPSVGVKTMKTFVIHIQEKQFQTGIFIYQNNITPSAMKLV 124 Query: 39 -----ATFNNFSASRLEV 1 AT F + L V Sbjct: 125 PSIPPATIETFHEAALVV 142 [133][TOP] >UniRef100_Q4U8E3 DNA-directed RNA polymerase, subunit (RPB5 homologue), putative n=1 Tax=Theileria annulata RepID=Q4U8E3_THEAN Length = 205 Score = 55.5 bits (132), Expect = 3e-06 Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 2/112 (1%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193 D++ +L++ RRT +ML DR Y + E + +FK+ + + + R ++ + + + Sbjct: 2 DDEEGRLFRCRRTCCEMLEDRGYFIPSQEKLETFAEFKARYEMYDKVRSKMLLVASLRTA 61 Query: 192 PSERVCVFFFDE-AKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40 ++ V+F DE K GV ++ +T RM + R ILV Q +P AK A+ Sbjct: 62 AENKLLVYFADEKKKTGVKPIRELTERMEDHDIHRAILVTQNVLTPFAKDAI 113 [134][TOP] >UniRef100_A7TEH4 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TEH4_VANPO Length = 215 Score = 54.7 bits (130), Expect = 5e-06 Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 14/137 (10%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199 + +++L++ RT+ +M+ DR Y ++ E+ +S +DFK+++ + +R+ + Q Sbjct: 6 ERSISRLWRTFRTVKEMVRDRGYFIAQEEIDLSLEDFKAKYCDSMGRPQRKMMSFQANPT 65 Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV- 40 ++ E+ + V F DE +GV +K+ + +N+ GI V Q +P A V Sbjct: 66 EETMEKFPTMSSLWVEFCDEPSVGVKTMKNFVIHIQEKNYQTGIFVYQTNVTPSAMKLVP 125 Query: 39 ----ATFNNFSASRLEV 1 AT F + L V Sbjct: 126 SIPPATIETFHEASLIV 142 [135][TOP] >UniRef100_B0EA74 DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative n=1 Tax=Entamoeba dispar SAW760 RepID=B0EA74_ENTDI Length = 204 Score = 54.3 bits (129), Expect = 7e-06 Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 3/109 (2%) Frame = -3 Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEF---GEHFRREQLEIQKTHKD 196 E+VT +Y+ +T+L+ML DR Y S+ + + + + FK F GE ++L I+ ++ Sbjct: 2 ENVTHIYRAWKTVLEMLRDRGYITSEEDHNTTLEGFKERFYKGGEGVDHKELTIKVVKEN 61 Query: 195 DPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAK 49 D ++ + VFF + L V+ + +E+ R I+V + S K Sbjct: 62 DATDGIIVFFAEGVSLKTDVLGKYLTEVESEHVKRAIIVYRGKLSSPVK 110 [136][TOP] >UniRef100_B6SJT2 DNA-directed RNA polymerase II 23 kDa polypeptide n=1 Tax=Zea mays RepID=B6SJT2_MAIZE Length = 154 Score = 53.9 bits (128), Expect = 9e-06 Identities = 31/118 (26%), Positives = 54/118 (45%) Frame = -3 Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175 +L+ RRT L+ML DR Y+V + EL+ + +F++ E+L T DPS +V Sbjct: 12 RLFLARRTALEMLXDRGYAVPEEELARTLPEFRAWXEYXPELERLAFXTTLTSDPSSKVK 71 Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRLEV 1 V F + + ++ I + EN R IL+ Q + ++ F ++ Sbjct: 72 VVFCPPGPVKIAAIRLIYTEVKDENLARLILILQGKIMSPTRESIKEIFRFKVDTFQI 129 [137][TOP] >UniRef100_C4LW54 RNA polymerase subunit Rpb5, putative n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4LW54_ENTHI Length = 204 Score = 53.9 bits (128), Expect = 9e-06 Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 3/109 (2%) Frame = -3 Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEF---GEHFRREQLEIQKTHKD 196 E VT +Y+ +T+L+ML DR Y S+ + + + + FK F GE ++L I+ ++ Sbjct: 2 ESVTHIYRAWKTVLEMLRDRGYITSEEDHNTTLEGFKERFYKGGEGVDHKELTIKVVKEN 61 Query: 195 DPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAK 49 D ++ + VFF + L V+ + +E+ R I+V + S K Sbjct: 62 DATDGIIVFFAEGVSLKTDVLGKYLTEVESEHVKRAIIVYRGKLSSPVK 110 [138][TOP] >UniRef100_Q5KN51 DNA-directed RNA polymerases ii 24 kDa polypeptide, putative n=1 Tax=Filobasidiella neoformans RepID=Q5KN51_CRYNE Length = 221 Score = 53.9 bits (128), Expect = 9e-06 Identities = 27/121 (22%), Positives = 60/121 (49%), Gaps = 14/121 (11%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFG--------------EHFR 232 + ++ +L+++ RT+ +M+ DR Y ++D E+++S ++FK G + Sbjct: 6 NRELARLWRVSRTVHEMVRDRGYLLADYEINVSFEEFKDRHGATGSVEWMKCPQADKSSS 65 Query: 231 REQLEIQKTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQA 52 R + H++D ++++ V+F + + +K+ M RGI++ + SP A Sbjct: 66 RSNMSFDAIHENDNTDKIFVYFCADKNVSKASMKTFIGSMDKMGARRGIIIWSEKMSPAA 125 Query: 51 K 49 K Sbjct: 126 K 126 [139][TOP] >UniRef100_C5MBX4 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MBX4_CANTT Length = 214 Score = 53.9 bits (128), Expect = 9e-06 Identities = 28/121 (23%), Positives = 64/121 (52%), Gaps = 9/121 (7%) Frame = -3 Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199 D +++L++ +T+ +M+ DR Y +S E+ M+ ++F+S+ + +R+Q+ Q Sbjct: 5 DRSISRLFRTFKTVKEMVRDRGYYISQEEIDMTLEEFRSKICDSMGNPQRKQMCFQAQPT 64 Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37 + E+ + V F DE+ +G+ +++ + +NF+ G+ + Q +P A + Sbjct: 65 GETLEKFPELGSLWVEFCDESSVGIKTMRNFCIHITEKNFSTGLFIYQNSITPSANKLIP 124 Query: 36 T 34 T Sbjct: 125 T 125