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[1][TOP]
>UniRef100_C6SXZ4 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SXZ4_SOYBN
Length = 206
Score = 120 bits (301), Expect = 8e-26
Identities = 55/119 (46%), Positives = 86/119 (72%)
Frame = -3
Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
MV +E++ +LY+IR+T++QML DRN+ V D E++MS+ +FKS++GEH +RE L I K+
Sbjct: 1 MVLSEEEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60
Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNN 25
KD+ +++ VFF DE K+GV +K+ TNRM +EN R ILV Q +P A+T ++ ++
Sbjct: 61 KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISS 119
[2][TOP]
>UniRef100_C6SVA4 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SVA4_SOYBN
Length = 206
Score = 117 bits (293), Expect = 7e-25
Identities = 54/119 (45%), Positives = 85/119 (71%)
Frame = -3
Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
MV +E++ +LY+IR+T++QML DR + V D E++MS+ +FKS++GEH +RE L I K+
Sbjct: 1 MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60
Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNN 25
KD+ +++ VFF DE K+GV +K+ TNRM +EN R ILV Q +P A+T ++ ++
Sbjct: 61 KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISS 119
[3][TOP]
>UniRef100_B9N7D1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N7D1_POPTR
Length = 206
Score = 110 bits (274), Expect = 1e-22
Identities = 51/114 (44%), Positives = 81/114 (71%)
Frame = -3
Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
M +E++ +L +IR+T++QML DR Y V D E+ M+R+ F+S++G + +RE L I KT
Sbjct: 1 MTLTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK 60
Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
++D S+++ VFF +EAK+GV +K+ TNRM +EN R ILV Q+ +P A+T +
Sbjct: 61 RNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI 114
[4][TOP]
>UniRef100_B3TLL2 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Elaeis
guineensis RepID=B3TLL2_ELAGV
Length = 204
Score = 107 bits (268), Expect = 5e-22
Identities = 50/111 (45%), Positives = 79/111 (71%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
++D+++L++IRRT++QML DR Y V D E++M++ F +FGE +RE L I K K+DP
Sbjct: 3 EDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKLQFLEKFGEGVKREDLVINKAKKNDP 62
Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
++++ VFF ++AK+GV +K RM EN TRGILV Q+ +P A+ ++A
Sbjct: 63 ADQIYVFFPNDAKVGVKQIKQYVERMKAENVTRGILVVQQALTPFARQSLA 113
[5][TOP]
>UniRef100_A7PEL2 Chromosome chr11 scaffold_13, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PEL2_VITVI
Length = 206
Score = 107 bits (266), Expect = 9e-22
Identities = 50/114 (43%), Positives = 80/114 (70%)
Frame = -3
Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
M +E++++L++IR+T++QML DR Y V D E++M++ F S+FGE+ +RE L I K
Sbjct: 1 MSASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAK 60
Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
+ D S+++ VFF +E K+GV +K+ TNRM +EN R ILV Q+ +P A+T +
Sbjct: 61 RTDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI 114
[6][TOP]
>UniRef100_B4FU06 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Zea mays
RepID=B4FU06_MAIZE
Length = 210
Score = 102 bits (255), Expect = 2e-20
Identities = 52/112 (46%), Positives = 75/112 (66%)
Frame = -3
Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
+V D+ V +LY+IRRT++QML DR Y V D EL+ SR+DF +FGE F RE L I K
Sbjct: 5 LVTDEATVGRLYRIRRTVMQMLRDRGYLVVDHELATSRRDFLRKFGESFHREDLLINKYK 64
Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKT 46
K+DPS+++ VFF ++ K+G+ +K M EN +R +LV Q+ +P AK+
Sbjct: 65 KNDPSDQIYVFFPNDDKVGMKHIKKYVEMMTHENVSRAVLVLQQNLTPFAKS 116
[7][TOP]
>UniRef100_A9RWG5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWG5_PHYPA
Length = 208
Score = 102 bits (253), Expect = 3e-20
Identities = 48/111 (43%), Positives = 78/111 (70%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
DE +LY+IR+T+++ML DR+Y V+D EL++S++ F+ ++G+ +RE L IQK + +
Sbjct: 7 DEQSARLYRIRKTVMEMLRDRDYVVADYELTLSKEQFREKYGDEPKREDLVIQKPRRSNN 66
Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
+E + VFF +EAK+GV +K+ +RM TEN R ILV Q+ +P A+ V+
Sbjct: 67 AEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVS 117
[8][TOP]
>UniRef100_O81098 RNA polymerase I, II and III 24.3 kDa subunit n=1 Tax=Arabidopsis
thaliana RepID=O81098_ARATH
Length = 205
Score = 101 bits (251), Expect = 5e-20
Identities = 46/115 (40%), Positives = 82/115 (71%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
+E++ +LY+I++T++QML DR Y ++D+EL+M+++ F + G++ +RE L K ++D
Sbjct: 4 EEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRNDN 63
Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNN 25
S+++ +FF DEAK+GV +K TNRM +EN R ILV Q+ +P A+T ++ ++
Sbjct: 64 SDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISS 118
[9][TOP]
>UniRef100_A9NTD1 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NTD1_PICSI
Length = 191
Score = 101 bits (251), Expect = 5e-20
Identities = 50/114 (43%), Positives = 76/114 (66%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
DE KL++IRRT+LQML DR+Y V D E++ +++ F +FGE ++E L I K ++ P
Sbjct: 4 DEQTNKLFRIRRTVLQMLNDRDYLVGDFEINTTKEQFLDKFGEDPKKEDLVINKAKRNSP 63
Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFN 28
SE++ VFF +EAK+GV +K+ RM +E R ILV Q+ +P A+ +V F+
Sbjct: 64 SEQIFVFFPEEAKVGVKSIKTYVERMKSEGVFRAILVVQQALTPFARQSVQEFS 117
[10][TOP]
>UniRef100_A9RKG6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RKG6_PHYPA
Length = 208
Score = 99.4 bits (246), Expect = 2e-19
Identities = 46/115 (40%), Positives = 80/115 (69%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
DE +LY+IR+T+++ML DR+Y V++ EL+ ++++F+ ++G+ +RE L IQK + +
Sbjct: 7 DEQCARLYRIRKTVMEMLRDRDYVVAEFELNSTKEEFREKYGDEPKREDLVIQKPKRSNN 66
Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNN 25
+E + VFF +EAK+GV +K+ +RM TEN R ILV Q+ +P A+ V+ ++
Sbjct: 67 AEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVSEMSS 121
[11][TOP]
>UniRef100_B8LR68 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LR68_PICSI
Length = 194
Score = 97.4 bits (241), Expect = 7e-19
Identities = 48/103 (46%), Positives = 70/103 (67%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
DE KL++IRRT+LQML DR+Y V D E++ +++ F +FGE ++E L I K ++ P
Sbjct: 4 DEQTNKLFRIRRTVLQMLNDRDYLVGDFEINTTKEQFLDKFGEDPKKEDLVINKAKRNSP 63
Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFS 61
SE++ VFF +EAK+GV +K+ RM +E R ILV Q+ FS
Sbjct: 64 SEQIFVFFPEEAKVGVKSIKTYVERMKSEGVFRAILVVQQEFS 106
[12][TOP]
>UniRef100_B9RKM1 DNA-directed RNA polymerase II, putative n=1 Tax=Ricinus communis
RepID=B9RKM1_RICCO
Length = 225
Score = 95.9 bits (237), Expect = 2e-18
Identities = 48/134 (35%), Positives = 82/134 (61%), Gaps = 19/134 (14%)
Frame = -3
Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
M ++++ +L++IRRT++QML DR Y V+D+E+++++ F S++G++ +RE L I K+
Sbjct: 1 MTLSEDEIKRLFRIRRTVMQMLKDRTYLVTDSEINITKHQFTSKYGDNMKREDLVIHKSK 60
Query: 201 KDD-------------------PSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILV 79
+D P ++ VFF +E K+GV +K+ TNRM +EN R ILV
Sbjct: 61 RDGSDSFYPTKLLFLNQLEAWLPLYQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV 120
Query: 78 CQKPFSPQAKTAVA 37
Q+ +P A+T +A
Sbjct: 121 VQQSLTPFARTCIA 134
[13][TOP]
>UniRef100_B9ETS9 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9ETS9_ORYSJ
Length = 210
Score = 94.7 bits (234), Expect = 5e-18
Identities = 47/112 (41%), Positives = 74/112 (66%)
Frame = -3
Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
+V ++ V +L +IRRT++QML DR Y V + EL+M R+DF ++GE F RE L I K
Sbjct: 5 LVTEEVMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINKYK 64
Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKT 46
K+DPS+++ VFF ++ K+G+ +K M EN +R +LV Q+ +P A++
Sbjct: 65 KNDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARS 116
[14][TOP]
>UniRef100_Q5VQW7 Os01g0805800 protein n=2 Tax=Oryza sativa RepID=Q5VQW7_ORYSJ
Length = 210
Score = 94.7 bits (234), Expect = 5e-18
Identities = 47/112 (41%), Positives = 74/112 (66%)
Frame = -3
Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
+V ++ V +L +IRRT++QML DR Y V + EL+M R+DF ++GE F RE L I K
Sbjct: 5 LVTEEVMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINKYK 64
Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKT 46
K+DPS+++ VFF ++ K+G+ +K M EN +R +LV Q+ +P A++
Sbjct: 65 KNDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARS 116
[15][TOP]
>UniRef100_A8J805 DNA-directed RNA polymerase II, 23 kDa polypeptide n=1
Tax=Chlamydomonas reinhardtii RepID=A8J805_CHLRE
Length = 206
Score = 94.4 bits (233), Expect = 6e-18
Identities = 45/109 (41%), Positives = 71/109 (65%)
Frame = -3
Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187
+++T+L+++RRT LQML DR Y VS E+ ++ F+ FGE+ R++ L I +DDP+
Sbjct: 2 DNLTRLWRVRRTCLQMLNDRGYLVSQEEIGTTKDQFRDRFGENPRKDDLTILVPRQDDPT 61
Query: 186 ERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
E++ VFF +E K+GV +K + RM E R I+V F+P AK+A+
Sbjct: 62 EQIFVFFPEEQKVGVKTIKLLAERMKDEKVNRAIMVTPSKFTPFAKSAL 110
[16][TOP]
>UniRef100_UPI0000D9E960 PREDICTED: similar to DNA directed RNA polymerase II polypeptide E
n=1 Tax=Macaca mulatta RepID=UPI0000D9E960
Length = 278
Score = 92.4 bits (228), Expect = 2e-17
Identities = 45/116 (38%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+ED +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L +
Sbjct: 3 DEEDTYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118
[17][TOP]
>UniRef100_Q4S3C9 Chromosome 1 SCAF14751, whole genome shotgun sequence n=1
Tax=Tetraodon nigroviridis RepID=Q4S3C9_TETNG
Length = 210
Score = 91.7 bits (226), Expect = 4e-17
Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + +FKS+FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR I+V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSL 118
[18][TOP]
>UniRef100_C3KI95 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Anoplopoma fimbria RepID=C3KI95_9PERC
Length = 210
Score = 91.7 bits (226), Expect = 4e-17
Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + +FKS+FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR I+V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSL 118
[19][TOP]
>UniRef100_C1BIS3 DNA-directed RNA polymerase II 23 kDa polypeptide n=1 Tax=Osmerus
mordax RepID=C1BIS3_OSMMO
Length = 210
Score = 91.7 bits (226), Expect = 4e-17
Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + +FKS+FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR I+V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSL 118
[20][TOP]
>UniRef100_B5FX59 Putative DNA directed RNA polymerase II polypeptide E n=2
Tax=Neognathae RepID=B5FX59_TAEGU
Length = 210
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSL 118
[21][TOP]
>UniRef100_C1C3Q7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Rana catesbeiana RepID=C1C3Q7_RANCA
Length = 210
Score = 91.3 bits (225), Expect = 5e-17
Identities = 45/116 (38%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + +FK++FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKAQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR I+V Q+ +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQQGMTPSAKQSL 118
[22][TOP]
>UniRef100_B5XGU7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Salmo salar RepID=B5XGU7_SALSA
Length = 159
Score = 91.3 bits (225), Expect = 5e-17
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
DDE+ +L+KIR+TI+Q+ DR Y V+ EL + +FKS+FG+ RR L +
Sbjct: 3 DDEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR +V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSL 118
[23][TOP]
>UniRef100_B5X957 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=2
Tax=Euteleostei RepID=B5X957_SALSA
Length = 210
Score = 91.3 bits (225), Expect = 5e-17
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
DDE+ +L+KIR+TI+Q+ DR Y V+ EL + +FKS+FG+ RR L +
Sbjct: 3 DDEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR +V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSL 118
[24][TOP]
>UniRef100_UPI000194DF40 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide E, 25kDa
n=1 Tax=Taeniopygia guttata RepID=UPI000194DF40
Length = 119
Score = 90.9 bits (224), Expect = 7e-17
Identities = 44/113 (38%), Positives = 71/113 (62%), Gaps = 5/113 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAK 49
H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAK 115
[25][TOP]
>UniRef100_UPI00005A3E0E PREDICTED: similar to DNA directed RNA polymerase II polypeptide E
isoform 1 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A3E0E
Length = 208
Score = 90.9 bits (224), Expect = 7e-17
Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118
[26][TOP]
>UniRef100_UPI0000EB19D6 DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RNA
polymerases I, II, and III subunit ABC1) (DNA-directed
RNA polymerase II subunit E) (RPB5) (DNA-directed RNA
polymerase II 23 kDa polypeptide) (XAP4). n=1 Tax=Canis
lupus familiaris RepID=UPI0000EB19D6
Length = 212
Score = 90.9 bits (224), Expect = 7e-17
Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118
[27][TOP]
>UniRef100_UPI00005A3E0F PREDICTED: similar to DNA-directed RNA polymerase II 23 kDa
polypeptide (RPB25) (RPB5) (RPABC1) isoform 2 n=1
Tax=Canis lupus familiaris RepID=UPI00005A3E0F
Length = 162
Score = 90.9 bits (224), Expect = 7e-17
Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118
[28][TOP]
>UniRef100_Q6DEG5 Polymerase (RNA) II (DNA directed) polypeptide E n=1 Tax=Danio
rerio RepID=Q6DEG5_DANRE
Length = 210
Score = 90.9 bits (224), Expect = 7e-17
Identities = 45/116 (38%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + +F+S+FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFRSQFGDKPSEGRPRRNDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR I+V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSL 118
[29][TOP]
>UniRef100_Q8R0H0 Polr2e protein n=1 Tax=Mus musculus RepID=Q8R0H0_MOUSE
Length = 162
Score = 90.9 bits (224), Expect = 7e-17
Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118
[30][TOP]
>UniRef100_Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=3
Tax=Murinae RepID=RPAB1_MOUSE
Length = 210
Score = 90.9 bits (224), Expect = 7e-17
Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118
[31][TOP]
>UniRef100_Q28HF5 Polymerase (RNA) II (DNA directed) polypeptide E n=2 Tax=Xenopus
RepID=Q28HF5_XENTR
Length = 210
Score = 90.5 bits (223), Expect = 9e-17
Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + +FK++FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKAQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSL 118
[32][TOP]
>UniRef100_C1BZT4 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Esox lucius RepID=C1BZT4_ESOLU
Length = 210
Score = 90.1 bits (222), Expect = 1e-16
Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + +FKS+FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLA 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR +V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSL 118
[33][TOP]
>UniRef100_Q01A87 RNA polymerase I, II and III 24.3 kDa subunit (ISS) n=1
Tax=Ostreococcus tauri RepID=Q01A87_OSTTA
Length = 1124
Score = 90.1 bits (222), Expect = 1e-16
Identities = 47/105 (44%), Positives = 63/105 (60%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
+L+++R+TI +MLA R Y VS EL F EFGE +R+ L I KDDPSE +
Sbjct: 927 RLFRVRKTIHKMLAARGYLVSARELERDADSFAEEFGEEPKRDSLTILAPRKDDPSENIF 986
Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
VFF DE K+GV +K + RM EN R I+V Q +P AK ++
Sbjct: 987 VFFPDEEKVGVKTIKDLAKRMKEENVFRAIIVVQASLTPFAKQSL 1031
[34][TOP]
>UniRef100_B5X8S7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Salmo salar RepID=B5X8S7_SALSA
Length = 210
Score = 89.7 bits (221), Expect = 2e-16
Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + +FKS+FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR +V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSL 118
[35][TOP]
>UniRef100_B4FGM1 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FGM1_MAIZE
Length = 206
Score = 89.7 bits (221), Expect = 2e-16
Identities = 43/114 (37%), Positives = 70/114 (61%)
Frame = -3
Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTH 202
M D+++++L++IRRT+ +ML DR Y V D ++ + R F +G RR++L T
Sbjct: 1 MASPDDEISRLFRIRRTVYEMLRDRGYGVRDEQIKLERHKFIERYGNPVRRDELTFNATK 60
Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
+ PS+++ VFF +EAK GV +++ +M EN GILV Q+ S A++AV
Sbjct: 61 LNGPSDQIYVFFPNEAKPGVKTIRNYVEKMKNENVFAGILVVQQALSAFARSAV 114
[36][TOP]
>UniRef100_A4RWP8 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RWP8_OSTLU
Length = 205
Score = 89.7 bits (221), Expect = 2e-16
Identities = 47/106 (44%), Positives = 64/106 (60%)
Frame = -3
Query: 357 TKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERV 178
T+L+++R+TI +MLA R Y VS EL F +FGE +RE L I +DDPSE +
Sbjct: 7 TRLFRVRKTIHKMLAARGYLVSAKELERDIDSFTEDFGEEPKRESLTILAPKRDDPSENI 66
Query: 177 CVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
VFF DE K+GV +K + RM EN R I+V Q +P AK ++
Sbjct: 67 FVFFPDEEKVGVKTIKDLAKRMKDENVFRAIIVVQASLTPFAKQSL 112
[37][TOP]
>UniRef100_Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Pongo abelii RepID=RPAB1_PONAB
Length = 210
Score = 89.7 bits (221), Expect = 2e-16
Identities = 43/116 (37%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++F+++FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFRAQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118
[38][TOP]
>UniRef100_A6N9W6 25-kDa subunit RNA polymerase n=1 Tax=Ornithodoros parkeri
RepID=A6N9W6_ORNPR
Length = 210
Score = 89.0 bits (219), Expect = 3e-16
Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+ + KL++IR+TI+Q+ DR Y V+ EL + FK +FG+ R L +
Sbjct: 3 DEAETYKLWRIRKTIMQLCHDRGYLVTQDELDQTLDQFKQQFGDKPSERRPARSDLIVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF DE K+G+ +K+ RM EN TR I+V Q+ +P AK A+
Sbjct: 63 AHNDDPTDQMFVFFPDEPKIGIKTIKTYCQRMQEENITRAIIVVQQGMTPSAKQAL 118
[39][TOP]
>UniRef100_UPI000180C3C9 PREDICTED: similar to 25-kDa subunit RNA polymerase n=1 Tax=Ciona
intestinalis RepID=UPI000180C3C9
Length = 210
Score = 87.8 bits (216), Expect = 6e-16
Identities = 44/116 (37%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208
D+ + +L++IR+T++Q+ DR Y V+ EL S ++FK EFG+ R+ L I
Sbjct: 3 DEAETYRLWRIRKTVMQLCHDRGYLVTQHELDQSLEEFKEEFGDKPSERRPGRQDLTILV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+GV +K+ RM EN R I+V Q+ +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGVKTIKTYCQRMQEENIQRAIIVVQQSMTPSAKQSL 118
[40][TOP]
>UniRef100_UPI0000587A08 PREDICTED: similar to RPB5 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000587A08
Length = 210
Score = 87.8 bits (216), Expect = 6e-16
Identities = 42/116 (36%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+ + +L+++RRTI+Q+ DR Y V+ EL + + FK +FG+ R+ L +
Sbjct: 3 DEAETYRLWRVRRTIMQLCHDRGYLVTQEELDQTLEQFKEQFGDKPSENRPSRKDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K+ RM EN TR I+ Q+ +P AKT++
Sbjct: 63 AHNDDPTDQMFVFFPEEKKVGMKTIKAYCQRMQEENITRAIITVQEKMTPSAKTSL 118
[41][TOP]
>UniRef100_P19388 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Homo sapiens RepID=RPAB1_HUMAN
Length = 210
Score = 87.8 bits (216), Expect = 6e-16
Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++ G+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQSGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118
[42][TOP]
>UniRef100_C3ZQF0 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3ZQF0_BRAFL
Length = 210
Score = 87.4 bits (215), Expect = 8e-16
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208
D+++ KL++IR+TI+Q+ DR Y V+ EL FK +FG+ R+ L +
Sbjct: 3 DEQETYKLWRIRKTIMQLCHDRGYLVTQDELDQRLDQFKDQFGDKPSEGKPARKDLVVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF DE K+G+ +K RM EN +R I+V Q +P AK A+
Sbjct: 63 AHNDDPTDQMFVFFADEPKIGIKTIKMYCQRMQEENISRAIIVVQMGMTPSAKQAL 118
[43][TOP]
>UniRef100_B7T1F2 RNA polymerase II (Fragment) n=1 Tax=Oreochromis niloticus
RepID=B7T1F2_ORENI
Length = 108
Score = 87.0 bits (214), Expect = 1e-15
Identities = 44/107 (41%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQKTHKDDP 190
+L+KIR+TI+Q+ DR Y V+ EL + ++FKS+FG+ RR L + H DDP
Sbjct: 1 RLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKSQFGDKPSEGRPRRTDLTVLVAHNDDP 60
Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAK 49
++++ VFF +E K+G+ +K RM EN TR I+V Q +P AK
Sbjct: 61 TDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAK 107
[44][TOP]
>UniRef100_Q7XUF8 OJ991113_30.8 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q7XUF8_ORYSJ
Length = 205
Score = 86.7 bits (213), Expect = 1e-15
Identities = 42/110 (38%), Positives = 71/110 (64%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
+E+ ++L++IRRT++QML DR Y V++ ++ + R DF + FG+ R+ L + KD+
Sbjct: 4 EEETSRLFRIRRTVMQMLRDRGYLVTELDIDLPRGDFVARFGDPVDRDHLVFSRHKKDNG 63
Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
++++ VFF +AK GV ++S RM E+ GILV Q+ S A++AV
Sbjct: 64 ADQIYVFFPKDAKPGVKTIRSYVERMKQESVFNGILVVQQALSAFARSAV 113
[45][TOP]
>UniRef100_B7EQI7 cDNA clone:J023098I05, full insert sequence n=1 Tax=Oryza sativa
Japonica Group RepID=B7EQI7_ORYSJ
Length = 167
Score = 86.7 bits (213), Expect = 1e-15
Identities = 42/110 (38%), Positives = 71/110 (64%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
+E+ ++L++IRRT++QML DR Y V++ ++ + R DF + FG+ R+ L + KD+
Sbjct: 4 EEETSRLFRIRRTVMQMLRDRGYLVTELDIDLPRGDFVARFGDPVDRDHLVFSRHKKDNG 63
Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
++++ VFF +AK GV ++S RM E+ GILV Q+ S A++AV
Sbjct: 64 ADQIYVFFPKDAKPGVKTIRSYVERMKQESVFNGILVVQQALSAFARSAV 113
[46][TOP]
>UniRef100_A3AV22 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=A3AV22_ORYSJ
Length = 217
Score = 86.7 bits (213), Expect = 1e-15
Identities = 42/110 (38%), Positives = 71/110 (64%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDP 190
+E+ ++L++IRRT++QML DR Y V++ ++ + R DF + FG+ R+ L + KD+
Sbjct: 4 EEETSRLFRIRRTVMQMLRDRGYLVTELDIDLPRGDFVARFGDPVDRDHLVFSRHKKDNG 63
Query: 189 SERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
++++ VFF +AK GV ++S RM E+ GILV Q+ S A++AV
Sbjct: 64 ADQIYVFFPKDAKPGVKTIRSYVERMKQESVFNGILVVQQALSAFARSAV 113
[47][TOP]
>UniRef100_Q2T9T3 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Bos taurus RepID=RPAB1_BOVIN
Length = 210
Score = 86.7 bits (213), Expect = 1e-15
Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ L + ++FK++FG RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDGLDQTLEEFKAQFGGKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 118
[48][TOP]
>UniRef100_Q5DDM1 SJCHGC05306 protein n=1 Tax=Schistosoma japonicum
RepID=Q5DDM1_SCHJA
Length = 206
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
Frame = -3
Query: 378 VFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHK 199
+ DD + KL++IR+TIL+M DR Y V EL S +DFK+ G+ R+ L + H+
Sbjct: 1 MLDDSETYKLWRIRKTILKMCKDRGYLVMPKELEQSLEDFKATVGDPPARKDLLMVVNHE 60
Query: 198 DDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQ-KPFSPQAKTAVA 37
+DP++ + VFF +E K+ + V++ N+M ++ R ILV Q K +P AKTA+A
Sbjct: 61 EDPADMLYVFFPEEEKVNMKTVRAYLNQMQQDSTYRAILVLQEKGLTPSAKTAIA 115
[49][TOP]
>UniRef100_B0X7A5 DNA-directed RNA polymerase II 23 kDa polypeptide n=3 Tax=Culicidae
RepID=B0X7A5_CULQU
Length = 210
Score = 85.5 bits (210), Expect = 3e-15
Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
DD + KL++IR+T++Q+ DR Y V+ EL + + FK +FG+ R L +
Sbjct: 3 DDAETYKLWRIRKTVMQLSHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF DE K+G+ +K+ RM EN R I+V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPDEPKIGIKTIKTYCTRMQEENIHRAIVVVQAGMTPSAKQSL 118
[50][TOP]
>UniRef100_UPI000056951D UPI000056951D related cluster n=1 Tax=Danio rerio
RepID=UPI000056951D
Length = 211
Score = 85.1 bits (209), Expect = 4e-15
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+T++Q+ DR Y V+ EL + +FK +FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTVMQLCHDRGYLVTQDELDQTLDEFKIQFGDRPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFF-FDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN TR ++V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPVEELKVGIKTIKMYCQRMQEENITRAVIVVQTGMTPSAKQSL 119
[51][TOP]
>UniRef100_C4PZ68 DNA-directed RNA polymerase II, putative (Fragment) n=1
Tax=Schistosoma mansoni RepID=C4PZ68_SCHMA
Length = 208
Score = 85.1 bits (209), Expect = 4e-15
Identities = 46/113 (40%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193
DD + KL++IR+TIL+M DR Y V EL S +DFK+ G+ R+ L + H++D
Sbjct: 5 DDSETYKLWRIRKTILKMCKDRGYLVMPKELEQSLEDFKATVGDPPTRKDLLMVVNHEED 64
Query: 192 PSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQ-KPFSPQAKTAVA 37
P++ + VFF +E K+ + V++ N+M ++ R ILV Q K +P AKTA+A
Sbjct: 65 PADMLYVFFPEEEKVNMKTVRAYLNQMQQDSTYRAILVLQEKGLTPSAKTAIA 117
[52][TOP]
>UniRef100_C1EDR8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EDR8_9CHLO
Length = 204
Score = 84.7 bits (208), Expect = 5e-15
Identities = 42/109 (38%), Positives = 65/109 (59%)
Frame = -3
Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187
E T+L++IR+T+ +ML R Y V+ EL + F EFGE RR+ L +Q ++DP+
Sbjct: 3 EKKTRLFRIRKTVCKMLNARGYLVAQAELDRDKDSFTEEFGEDPRRDALTLQFDLREDPT 62
Query: 186 ERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
+ + VFF DE K+GV +K RM E R I+V Q+ +P A+ ++
Sbjct: 63 QHIFVFFPDEEKVGVKTIKEYAKRMKDEQVNRAIIVVQQSLTPFARQSL 111
[53][TOP]
>UniRef100_Q9N5K2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Caenorhabditis elegans RepID=RPAB1_CAEEL
Length = 211
Score = 84.7 bits (208), Expect = 5e-15
Identities = 42/119 (35%), Positives = 72/119 (60%), Gaps = 5/119 (4%)
Frame = -3
Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLE 217
M D+ + +L++IR+T+LQM+ DR Y V+ EL + FK ++G+ R L
Sbjct: 1 MADDELETYRLWRIRKTVLQMVHDRGYLVAQDELDQPLETFKVQYGDRPSEKKPARSDLT 60
Query: 216 IQKTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
I H DDP++++ VFF ++AK+G+ +K+I +M +N +R I+V Q +P AK ++
Sbjct: 61 ILVAHNDDPADQMFVFFPEDAKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSI 119
[54][TOP]
>UniRef100_UPI000186E78B DNA-directed RNA polymerase II 23 kDa polypeptide, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186E78B
Length = 210
Score = 84.3 bits (207), Expect = 6e-15
Identities = 41/117 (35%), Positives = 70/117 (59%), Gaps = 5/117 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208
D+ + KL++IR+T++Q+ DR Y V+ EL + + FK +FG+ R L +
Sbjct: 3 DEAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKIPARSDLIVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
H DDP++++ VFF D+ K+G+ +K+ RM EN R I+V Q+ +P AK +++
Sbjct: 63 AHNDDPTDQMFVFFPDDPKIGIKTIKTYCQRMQEENIHRAIIVVQQGMTPSAKQSLS 119
[55][TOP]
>UniRef100_C6K8L9 RNA polymerase II B subunit n=1 Tax=Caenorhabditis brenneri
RepID=C6K8L9_CAEBE
Length = 211
Score = 84.0 bits (206), Expect = 8e-15
Identities = 43/119 (36%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Frame = -3
Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLE 217
M D+ + +L++IR+T+LQM+ DR Y V+ EL FK FG+ R L
Sbjct: 1 MADDELETYRLWRIRKTVLQMVHDRGYLVAQEELDQPLGHFKETFGDRPSEKKPARADLT 60
Query: 216 IQKTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
I H DDP++++ VFF D+ K+G+ +K+I +M +N +R I+V Q +P AK ++
Sbjct: 61 ILVAHNDDPADQMFVFFPDDTKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSI 119
[56][TOP]
>UniRef100_A8XGH1 C. briggsae CBR-RPB-5 protein n=1 Tax=Caenorhabditis briggsae
RepID=A8XGH1_CAEBR
Length = 211
Score = 84.0 bits (206), Expect = 8e-15
Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Frame = -3
Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLE 217
M D+ + +L++IR+T+LQM+ DR Y V+ EL + FK FG+ R L
Sbjct: 1 MADDELETYRLWRIRKTVLQMVHDRGYLVAQEELDQPLETFKETFGDRPSEKKPARSDLT 60
Query: 216 IQKTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
I H DDP++++ VFF ++ K+G+ +K+I +M +N +R I+V Q +P AK ++
Sbjct: 61 ILVAHNDDPADQMFVFFPEDTKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSI 119
[57][TOP]
>UniRef100_UPI0000D56A05 PREDICTED: similar to AGAP010064-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D56A05
Length = 210
Score = 83.6 bits (205), Expect = 1e-14
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+ + KL++IR+T++Q+ DR Y V+ EL + + FK + G+ R L I
Sbjct: 3 DEAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQCGDKPSEKRPSRNDLTILV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF DE K+G+ +K+ RM EN R I+V Q+ +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPDEPKIGIKAIKTYCQRMQDENIHRAIIVVQQGMTPSAKQSL 118
[58][TOP]
>UniRef100_C1MXV4 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MXV4_9CHLO
Length = 206
Score = 83.6 bits (205), Expect = 1e-14
Identities = 42/109 (38%), Positives = 63/109 (57%)
Frame = -3
Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187
E VTKL++I +T+ +ML R Y V EL + F+ +G+ +RE L + +DDPS
Sbjct: 5 EKVTKLFRIHKTVHKMLNARGYLVQQKELERDKDSFREAYGDDPKRESLTLMLPRRDDPS 64
Query: 186 ERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
E + VFF +E K+GV +K RM E+ R I+V Q +P AK ++
Sbjct: 65 ENIFVFFPEEEKVGVKTIKEYAKRMKDESVFRAIIVVQASLTPFAKQSL 113
[59][TOP]
>UniRef100_UPI000051A7F2 PREDICTED: similar to Rpb5 CG11979-PA n=1 Tax=Apis mellifera
RepID=UPI000051A7F2
Length = 179
Score = 83.2 bits (204), Expect = 1e-14
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+ + KL++IR+T++Q+ DR Y V+ EL + + FK +FG+ R L +
Sbjct: 3 DEAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF DE K+G+ +K+ RM E R I+V Q+ +P AK ++
Sbjct: 63 AHNDDPTDQLFVFFPDEPKIGIKTIKTYCQRMQEEKIHRAIIVVQQGMTPSAKQSL 118
[60][TOP]
>UniRef100_UPI00003C0CAC PREDICTED: similar to Rpb5 CG11979-PA n=1 Tax=Apis mellifera
RepID=UPI00003C0CAC
Length = 210
Score = 83.2 bits (204), Expect = 1e-14
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+ + KL++IR+T++Q+ DR Y V+ EL + + FK +FG+ R L +
Sbjct: 3 DEAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF DE K+G+ +K+ RM E R I+V Q+ +P AK ++
Sbjct: 63 AHNDDPTDQLFVFFPDEPKIGIKTIKTYCQRMQEEKIHRAIIVVQQGMTPSAKQSL 118
[61][TOP]
>UniRef100_UPI00015B5456 PREDICTED: similar to ENSANGP00000006082 n=1 Tax=Nasonia
vitripennis RepID=UPI00015B5456
Length = 210
Score = 82.8 bits (203), Expect = 2e-14
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+ + KL++IR+T++Q+ DR Y V+ EL + + FK +FG+ R L +
Sbjct: 3 DEAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF DE K+G+ +K+ RM E R I+V Q +P AK ++
Sbjct: 63 AHNDDPTDQLFVFFPDEPKIGIKTIKTYCQRMQEEKIHRAIIVVQSGMTPSAKQSL 118
[62][TOP]
>UniRef100_C1C1G9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Caligus clemensi RepID=C1C1G9_9MAXI
Length = 210
Score = 82.8 bits (203), Expect = 2e-14
Identities = 41/116 (35%), Positives = 69/116 (59%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQ-----LEIQK 208
D+ + KL+K+R+T++ + DR Y V+ EL ++ FK +FG+ +Q L I
Sbjct: 3 DESETYKLWKVRKTVMSLCHDRGYLVTQDELDQTQDQFKVQFGDKPSEKQPSRNDLTILV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF ++ K+GV +++ RM EN TR I+V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEDPKIGVKHIRTYCKRMQEENITRAIIVVQAGMTPSAKQSL 118
[63][TOP]
>UniRef100_B3S3Q9 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3S3Q9_TRIAD
Length = 210
Score = 82.8 bits (203), Expect = 2e-14
Identities = 49/135 (36%), Positives = 73/135 (54%), Gaps = 11/135 (8%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMS----RKDFKSEFGEHFR-REQLEIQK 208
D+E+ KL++IR+T++QM DR Y VS EL + + F SE E + R L +
Sbjct: 3 DEEEAYKLWRIRKTVMQMCHDRGYMVSQEELDQTFDQFHEQFYSEMSESSQVRGLLSMLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA--- 37
H DDP+E++ VFF DE K+G+ +K RM EN R I++ Q +P AK ++
Sbjct: 63 HHIDDPTEQLFVFFPDEPKVGINTIKKYCQRMQRENINRAIIIIQSGMTPTAKQSLIDMA 122
Query: 36 ---TFNNFSASRLEV 1
T +F S L +
Sbjct: 123 PKYTLESFMESELMI 137
[64][TOP]
>UniRef100_C4WY48 ACYPI000388 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WY48_ACYPI
Length = 210
Score = 82.4 bits (202), Expect = 2e-14
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
Frame = -3
Query: 372 DDE-DVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQ 211
DDE + KL++IR+T++Q+ DR Y V+ EL + + FK +FG+ R L +
Sbjct: 2 DDECESYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPGRSDLIVL 61
Query: 210 KTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K+ RM E TR I+V Q+ +P AK ++
Sbjct: 62 VAHNDDPTDQMFVFFPEEPKIGIKTIKTYCQRMQEETITRAIIVVQQGMTPSAKQSL 118
[65][TOP]
>UniRef100_B4MK71 GK20665 n=1 Tax=Drosophila willistoni RepID=B4MK71_DROWI
Length = 210
Score = 80.9 bits (198), Expect = 7e-14
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+ + KL++IR+TI+Q+ DR Y V+ EL + + FK FG+ R L +
Sbjct: 3 DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K+ RM EN R I+V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118
[66][TOP]
>UniRef100_B4KPZ3 GI19761 n=2 Tax=Drosophila RepID=B4KPZ3_DROMO
Length = 210
Score = 80.9 bits (198), Expect = 7e-14
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+ + KL++IR+TI+Q+ DR Y V+ EL + + FK FG+ R L +
Sbjct: 3 DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSDKRPSRSDLIVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K+ RM EN R I+V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118
[67][TOP]
>UniRef100_B4J892 GH20567 n=1 Tax=Drosophila grimshawi RepID=B4J892_DROGR
Length = 210
Score = 80.9 bits (198), Expect = 7e-14
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+ + KL++IR+TI+Q+ DR Y V+ EL + + FK FG+ R L +
Sbjct: 3 DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSDKRPARSDLIVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K+ RM EN R I+V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118
[68][TOP]
>UniRef100_B5DLL1 GA22602 n=2 Tax=pseudoobscura subgroup RepID=B5DLL1_DROPS
Length = 210
Score = 80.9 bits (198), Expect = 7e-14
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+ + KL++IR+TI+Q+ DR Y V+ EL + + FK FG+ R L +
Sbjct: 3 DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKDMFGDKPSEKRPARSDLIVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K+ RM EN R I+V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118
[69][TOP]
>UniRef100_Q7JZF5 Rpb5 n=5 Tax=melanogaster subgroup RepID=Q7JZF5_DROME
Length = 210
Score = 80.9 bits (198), Expect = 7e-14
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+ + KL++IR+TI+Q+ DR Y V+ EL + + FK FG+ R L +
Sbjct: 3 DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K+ RM EN R I+V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118
[70][TOP]
>UniRef100_B3MEP0 GF12445 n=1 Tax=Drosophila ananassae RepID=B3MEP0_DROAN
Length = 210
Score = 80.9 bits (198), Expect = 7e-14
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+ + KL++IR+TI+Q+ DR Y V+ EL + + FK FG+ R L +
Sbjct: 3 DEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPSRSDLIVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K+ RM EN R I+V Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSL 118
[71][TOP]
>UniRef100_C1BRK0 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Caligus rogercresseyi RepID=C1BRK0_9MAXI
Length = 210
Score = 80.5 bits (197), Expect = 9e-14
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQ-----LEIQK 208
D+ + KL+K+R+T++ + DR Y V+ EL + FK +FG+ +Q L I
Sbjct: 3 DEAENYKLWKVRKTVMSLCHDRGYLVTQDELDQTLDQFKVQFGDKPSEKQPSRNDLTILV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF D+ K+G+ +++ RM EN TR I++ Q +P AK ++
Sbjct: 63 AHNDDPTDQMFVFFPDDPKIGIKHIRTYCKRMQEENITRAIILVQSGMTPSAKQSL 118
[72][TOP]
>UniRef100_UPI0000E24E5A PREDICTED: similar to Polymerase (RNA) II (DNA directed)
polypeptide E, 25kDa n=1 Tax=Pan troglodytes
RepID=UPI0000E24E5A
Length = 230
Score = 79.3 bits (194), Expect = 2e-13
Identities = 39/105 (37%), Positives = 64/105 (60%), Gaps = 5/105 (4%)
Frame = -3
Query: 339 RRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQKTHKDDPSERVC 175
R+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L + H DDP++++
Sbjct: 34 RKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMF 93
Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
VFF +E K+G+ +K RM EN TR ++V Q+ +P AK ++
Sbjct: 94 VFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSL 138
[73][TOP]
>UniRef100_B4GBQ3 GL10501 n=1 Tax=Drosophila persimilis RepID=B4GBQ3_DROPE
Length = 210
Score = 77.8 bits (190), Expect = 6e-13
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208
D+E++ K+++IR+T+LQM DR Y V+ EL + + F+ FG+ R + +
Sbjct: 3 DEEELYKMWRIRKTVLQMCHDRGYLVTQEELDQTLQGFQEIFGDRPSENCPSRADITLLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM E+ R I+V Q +P A+ A+
Sbjct: 63 AHNDDPTDQMFVFFPEEPKVGIKDIKRYCLRMQEESIYRAIIVVQNSITPSARQAL 118
[74][TOP]
>UniRef100_B5E0K0 GA24393 n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=B5E0K0_DROPS
Length = 210
Score = 77.0 bits (188), Expect = 1e-12
Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208
D+E++ K+++IR+T+LQM DR Y V+ EL + + F+ FG+ R + +
Sbjct: 3 DEEELYKMWRIRKTVLQMCHDRGYLVTQEELDQTLQGFQEIFGDRPSENCPSRADITLLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF E K+G+ +K RM E+ R I+V Q +P A+ A+
Sbjct: 63 AHNDDPTDQMFVFFPQEPKVGIKDIKRYCLRMQEESIYRAIIVVQNSITPSARQAL 118
[75][TOP]
>UniRef100_Q54EH2 DNA-directed RNA polymerases I, II, and III subunit rpabc1 n=1
Tax=Dictyostelium discoideum RepID=RPAB1_DICDI
Length = 197
Score = 77.0 bits (188), Expect = 1e-12
Identities = 45/121 (37%), Positives = 66/121 (54%)
Frame = -3
Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187
ED+ +L +IR+T+LQML+DR Y ++ E R+ F S RE L + KDDP+
Sbjct: 2 EDINRLLQIRKTVLQMLSDREYIITAYEQEYPRESFVS-------RENLTMYCVKKDDPT 54
Query: 186 ERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRL 7
+ + VFF D K+GV +K + M R I+V Q+ +P AK A+A F+ L
Sbjct: 55 DSIYVFFPDTPKVGVTQIKKYVDIMKDRQANRAIIVVQQNITPFAKQALAEFSQEKKITL 114
Query: 6 E 4
E
Sbjct: 115 E 115
[76][TOP]
>UniRef100_Q98RN7 RNA polymerase I, II and III 24.3 kDa subunit n=1 Tax=Guillardia
theta RepID=Q98RN7_GUITH
Length = 214
Score = 75.5 bits (184), Expect = 3e-12
Identities = 40/124 (32%), Positives = 74/124 (59%), Gaps = 8/124 (6%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDT--ELSMSRKDFKSEFGEHFR--REQLEIQKT 205
DD+++ L+K+RRT+LQM+ DR Y V D+ +L++SR F+ + ++ R+ LEI++
Sbjct: 3 DDKNIQHLFKVRRTVLQMIRDRGYVVFDSKDDLNISRSSFEEFYMKNHAICRKSLEIKRP 62
Query: 204 HKDDPSERVCVFFF----DEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
D+P R+ + F D+ +GV ++ R+ E F+R +++ +P AK AV+
Sbjct: 63 RWDNPENRILIVFVEGEKDKMNIGVKSIRLFCERIKNEGFSRVLMILNGKLTPHAKQAVS 122
Query: 36 TFNN 25
+ N+
Sbjct: 123 SINS 126
[77][TOP]
>UniRef100_A8QAC6 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
7966 RepID=A8QAC6_MALGO
Length = 159
Score = 74.7 bits (182), Expect = 5e-12
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEH--FRREQLEIQKTHK 199
DD + +L+++ RTI +++ADR Y VS+ EL++ FK+E + R ++ HK
Sbjct: 3 DDRETARLWRVNRTIHELVADRGYEVSEEELNVDLDTFKAEVTSNGIVDRNRMNFFTQHK 62
Query: 198 DDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
D P ER+ VF+ E +GV ++ N + +N TRGI++ + AK +
Sbjct: 63 DKPEERLFVFYSTERNVGVKTMRQFINILEEKNITRGIIIWSDKMTSAAKKVI 115
[78][TOP]
>UniRef100_Q9FJL8 RNA polymerase I, II and III 24.3 kDa subunit-like protein n=1
Tax=Arabidopsis thaliana RepID=Q9FJL8_ARATH
Length = 210
Score = 73.9 bits (180), Expect = 9e-12
Identities = 36/118 (30%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE---HFRREQLEIQKTHK 199
D+++T+++K+RRT+LQML DR Y++ +++L++ R++F F + +E L +
Sbjct: 5 DDEITRIFKVRRTVLQMLRDRGYTIEESDLNLKREEFVQRFCKTMNKVNKEALFVSANKG 64
Query: 198 DDPSERVCVFFFDEAKLGVGVV-KSITNRMGTENFTRGILVCQKPFSPQAKTAVATFN 28
+P++++ VF+ + K+GV V+ K + +M + RGI+V + A+ AV+ N
Sbjct: 65 PNPADKIYVFYPEGPKVGVPVIKKEVAIKMRDDKVHRGIVVVPMAITAPARMAVSELN 122
[79][TOP]
>UniRef100_B8C1Q1 RPB5,-like protein to RNA polymerase i n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8C1Q1_THAPS
Length = 226
Score = 73.2 bits (178), Expect = 1e-11
Identities = 40/108 (37%), Positives = 63/108 (58%)
Frame = -3
Query: 363 DVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSE 184
+ ++L+++ +T+ ML+ R Y VS M+ DF FGE+ RE L I DD +
Sbjct: 27 EASRLFRVYKTVSAMLSKRGYMVSREMREMTPFDFTQRFGEYPSREGLTILVEKADDETN 86
Query: 183 RVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
++ VFF ++ K+GV +K +T+RM EN + ILV + +P AK AV
Sbjct: 87 QLFVFFPEDEKVGVKPIKILTDRMKDENVSNAILVLRGDITPFAKQAV 134
[80][TOP]
>UniRef100_B5DLP1 GA22581 n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=B5DLP1_DROPS
Length = 320
Score = 73.2 bits (178), Expect = 1e-11
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQK 208
D+ +V KL+ IR+T+ +M DR Y V+ EL + + F FG+ R L +
Sbjct: 3 DEAEVYKLWHIRKTLFEMSHDRGYLVTSAELDQTVEQFTELFGDKPSEQSPMRSDLTMLL 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
+H DDP R+ VFF +E K+ V +K+ +RM E R ILV + +P AK ++
Sbjct: 63 SHADDPKNRMLVFFPEEPKVAVKTIKAYAHRMEGEGIHRAILVVRDCLTPPAKQSI 118
[81][TOP]
>UniRef100_B9IHS9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IHS9_POPTR
Length = 216
Score = 72.8 bits (177), Expect = 2e-11
Identities = 45/119 (37%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Frame = -3
Query: 375 FDDEDVT---KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKT 205
F DE T + Y RRT+L+ML DR YSV +E+ +S +DF+ +G++ E L+ T
Sbjct: 11 FVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIELLKFSAT 70
Query: 204 HKDDPSERVCVFFFDEAKLGVGVVKSITNRM-GTENFTRGILVCQKPFSPQAKTAVATF 31
HK DPS+R+ V F + VG+++ IT ++ ++ T ILV Q + QA A+ F
Sbjct: 71 HKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQAMKALDLF 129
[82][TOP]
>UniRef100_Q8ID59 DNA-directed RNA polymerase 2, putative n=1 Tax=Plasmodium
falciparum 3D7 RepID=Q8ID59_PLAF7
Length = 205
Score = 72.8 bits (177), Expect = 2e-11
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
++ VT+ YK R+T +ML DR Y ++ E + FK F ++ R R ++ I THK+D
Sbjct: 2 EDPVTRFYKCRKTCCEMLEDRGYIMTPREKLENFSTFKEMFEDNDRQRSKMGISTTHKND 61
Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
+ R+ V+F DE K GV ++ +T RM ++ R ILV Q +P A+ A+
Sbjct: 62 SNNRIIVYFADEVKKTGVKPLRELTERMEEKSIQRAILVTQNILTPFARDAI 113
[83][TOP]
>UniRef100_B3L6X3 DNA-directed RNA polymerase 2, putative n=1 Tax=Plasmodium knowlesi
strain H RepID=B3L6X3_PLAKH
Length = 205
Score = 72.0 bits (175), Expect = 3e-11
Identities = 38/112 (33%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
++ +T+ YK R+T +ML DR Y ++ E + FK +F E+ + R ++ I +HK+D
Sbjct: 2 EDPITRFYKCRKTCCEMLEDRGYVITPREKLENFATFKEQFEENEKLRSRMTIITSHKND 61
Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
S ++ V+F DE K GV ++ +T +M ++ R ILV Q +P A+ A+
Sbjct: 62 ESNKIIVYFADETKKTGVKPLRELTEKMDEKSIQRAILVTQNTLTPFARDAI 113
[84][TOP]
>UniRef100_A7RT72 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RT72_NEMVE
Length = 207
Score = 72.0 bits (175), Expect = 3e-11
Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Frame = -3
Query: 372 DDEDVT-KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-----REQLEIQ 211
DD D+T K ++IR+T++Q+ N + EL + + FK +FG+ R L I
Sbjct: 2 DDTDLTYKFWRIRKTVMQVC---NGLILRDELDKTLEQFKEQFGDRPSEGRPSRSDLSIL 58
Query: 210 KTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
H DDP++++ VFF +E K+G+ +K RM EN +R ++V Q +P AK A+
Sbjct: 59 VAHNDDPTDQMFVFFPEEPKVGIKTIKQYCQRMQEENISRAVIVVQLGMTPSAKQAL 115
[85][TOP]
>UniRef100_C5KB88 DNA-directed RNA polymerases II 24 kDa polypeptide, putative n=1
Tax=Perkinsus marinus ATCC 50983 RepID=C5KB88_9ALVE
Length = 213
Score = 71.2 bits (173), Expect = 6e-11
Identities = 39/115 (33%), Positives = 71/115 (61%), Gaps = 5/115 (4%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRRE----QLEIQKTH 202
D+ +L+++R+TI ++L DR Y V+ L+ +++ F ++ E R+ L I +
Sbjct: 7 DDTTIRLWRVRKTIFELLQDRGYVVAQKYLNETKESFAQQWNEIQERKGGRHDLIILVSK 66
Query: 201 KDDPSERVCVFFFDEAK-LGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
+DDPS+++ VFF DE K +GV ++++ +M + +R ILV Q+P + AKTA+
Sbjct: 67 QDDPSDQLIVFFPDENKRVGVKPIRTLALKMEEQRLSRAILVVQQPLTAFAKTAI 121
[86][TOP]
>UniRef100_C5KHW9 DNA-directed RNA polymerases II 24 kDa polypeptide, putative n=1
Tax=Perkinsus marinus ATCC 50983 RepID=C5KHW9_9ALVE
Length = 213
Score = 70.9 bits (172), Expect = 7e-11
Identities = 41/115 (35%), Positives = 73/115 (63%), Gaps = 6/115 (5%)
Frame = -3
Query: 366 EDVT-KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRRE----QLEIQKTH 202
+DVT +L+++R+TI ++L DR Y V+ L+ +++ F ++ E R+ L I +
Sbjct: 7 DDVTIRLWRVRKTIFELLQDRGYLVAQKYLNETKESFAQQWNEIQERKGGRHDLIILVSK 66
Query: 201 KDDPSERVCVFFFDEAK-LGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
+DDPS+++ VFF DE K +GV ++++ +M + +R ILV Q+P + AKTA+
Sbjct: 67 QDDPSDQLIVFFPDENKRVGVKPIRTLALKMEEQRLSRAILVVQQPLTAFAKTAI 121
[87][TOP]
>UniRef100_A5K2Q3 DNA-directed RNA polymerase II 23 kDa polypeptide, putative n=1
Tax=Plasmodium vivax RepID=A5K2Q3_PLAVI
Length = 205
Score = 70.5 bits (171), Expect = 1e-10
Identities = 37/112 (33%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
++ +T+ YK R+T +ML DR Y ++ E + FK +F E+ + R ++ I +HK+D
Sbjct: 2 EDPITRFYKCRKTCCEMLEDRGYIITPREKLENFATFKEQFEENEKLRSRMTIITSHKND 61
Query: 192 PSERVCVFFFDE-AKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
+ ++ V+F DE K GV ++ +T +M ++ R ILV Q +P A+ A+
Sbjct: 62 ANNKIIVYFADEIKKTGVKPLRELTEKMDEKSIQRAILVTQNTLTPFARDAI 113
[88][TOP]
>UniRef100_B6KFE7 DNA-directed RNA polymerases I, II, and III subunit RPABC1,
putative n=3 Tax=Toxoplasma gondii RepID=B6KFE7_TOXGO
Length = 205
Score = 70.1 bits (170), Expect = 1e-10
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEH-FRREQLEIQKTHKDD 193
++ +L++ R+T ML DR Y VS E + S DF F E+ R ++ + +HK D
Sbjct: 2 EDSTRRLFRARKTCCDMLQDRGYIVSAQEKNESWNDFLQRFKENECNRSRMLLIASHKVD 61
Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA------T 34
P RV V+F DE K GV ++ +T RM N R ILV Q + A+ A++
Sbjct: 62 PDNRVIVYFADETKKTGVKPIRELTERMEERNIQRAILVTQNVLTAFARDAISEAAPRHI 121
Query: 33 FNNFSASRLEV 1
NF S L V
Sbjct: 122 IENFMESELLV 132
[89][TOP]
>UniRef100_B7FSY0 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7FSY0_PHATR
Length = 228
Score = 69.7 bits (169), Expect = 2e-10
Identities = 37/108 (34%), Positives = 60/108 (55%)
Frame = -3
Query: 363 DVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSE 184
+ +L+++ RTI ML R Y V T ++ FK FGE+ RE L I DD +
Sbjct: 29 EAARLFRVYRTIANMLDKRGYMVPKTLREITPSAFKERFGEYPSRENLTILVEKADDDTN 88
Query: 183 RVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
++ +FF ++ K+GV +K T+RM E+ + I++ + +P AK AV
Sbjct: 89 QLFIFFPEDEKVGVKPIKVYTDRMRAESVSNAIIILRVDITPFAKQAV 136
[90][TOP]
>UniRef100_B6AE06 DNA-directed RNA polymerase 2, putative n=1 Tax=Cryptosporidium
muris RN66 RepID=B6AE06_9CRYT
Length = 205
Score = 69.7 bits (169), Expect = 2e-10
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
D T+ ++ RRT+ +ML DR Y VS + FK F H R R ++ + +HK D
Sbjct: 2 DNSDTRFFRARRTLCEMLEDRGYIVSSQDKDEQFATFKERFESHQRLRSRMLMVASHKQD 61
Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
++R+ +F DE+ K GV ++ I +M N R IL+ Q + AK A+
Sbjct: 62 QTKRIICYFADESKKTGVKPIRDIVEKMDEHNIQRAILISQNVLTAHAKVAI 113
[91][TOP]
>UniRef100_Q9M1J2 Putative uncharacterized protein F24I3.160 n=1 Tax=Arabidopsis
thaliana RepID=Q9M1J2_ARATH
Length = 222
Score = 68.2 bits (165), Expect = 5e-10
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Frame = -3
Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187
E+ + Y RR LQML DR Y VSD ++++S DF++ +GE ++L I H+ D +
Sbjct: 23 EESHRYYLARRNGLQMLRDRGYEVSDEDINLSLHDFRTVYGERPDVDRLRISALHRSDST 82
Query: 186 ERVCVFFFDEAKLGVGVVKS-ITNRMGTENFTRGILVCQKPFSPQAKTAVATFN 28
++V + FF + + V ++S + + + E T ILV Q + QA A+ F+
Sbjct: 83 KKVKIVFFGTSMVKVNAIRSVVADILSQETITGLILVLQNHVTNQALKAIELFS 136
[92][TOP]
>UniRef100_A9BK88 Rpabc5 n=1 Tax=Cryptophyta RepID=A9BK88_9CRYP
Length = 216
Score = 68.2 bits (165), Expect = 5e-10
Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 8/127 (6%)
Frame = -3
Query: 381 MVFDDEDVTKLYKIRRTILQMLADRNYSV--SDTELSMSRKDFKSEFGEHFR--REQLEI 214
M D +++ L+KIRRTILQML DR+Y V + +L MSR F+ +F ++F+ R +LEI
Sbjct: 1 METDYKEILNLFKIRRTILQMLRDRSYVVFENQDDLEMSRSSFEQKFVKNFQVIRSELEI 60
Query: 213 QKTHKDDPSERVCVFFFDEAK----LGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKT 46
++ + + R+ V F + K +GV ++ R+ + F I+V + AK
Sbjct: 61 NRSKWLEENMRILVVFIEGEKEKSAIGVKSIRGFCERIKQDGFQNSIIVLHGKLTSHAKQ 120
Query: 45 AVATFNN 25
A+ + N+
Sbjct: 121 AINSINS 127
[93][TOP]
>UniRef100_A8NU15 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8NU15_COPC7
Length = 273
Score = 68.2 bits (165), Expect = 5e-10
Identities = 36/126 (28%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR---REQLEIQKTH 202
D ++ +L+K+ +TI +++ DR +SVSD E++MS + F+ +G + R QL H
Sbjct: 68 DGDETARLWKVSKTIHELVKDRGFSVSDEEINMSLERFRQVYGNNMGVIDRNQLNFYTHH 127
Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNF 22
+ +PS+++ V+F +E +GV ++ + M + RGI++ + A+ ++
Sbjct: 128 RLNPSDQIFVYFTEEPNVGVKAMRKLLGIMEEKAIQRGIIIFPATMTSSARKVISAM--A 185
Query: 21 SASRLE 4
S RLE
Sbjct: 186 STYRLE 191
[94][TOP]
>UniRef100_Q9ZVB9 Putative DNA-directed RNA polymerase 23kD subunit n=1
Tax=Arabidopsis thaliana RepID=Q9ZVB9_ARATH
Length = 218
Score = 66.6 bits (161), Expect = 1e-09
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
K Y RRT ++ML DR Y VSD ++++S + F++ +GEH + L I H+ D S+++
Sbjct: 23 KYYLARRTTMEMLRDRGYDVSDEDINLSLQQFRALYGEHPDVDLLRISAKHRFDSSKKIS 82
Query: 174 VFFFDEAKLGVGVVKSITNR------MGTENFTRGILVCQKPFSPQAKTAVATFN 28
V F G G+VK R + EN T ILV Q + QA AV F+
Sbjct: 83 VVF-----CGTGIVKVNAMRVIAADVLSRENITGLILVLQSHITNQALKAVELFS 132
[95][TOP]
>UniRef100_Q8L947 Putative DNA-directed RNA polymerase 23kD subunit n=1
Tax=Arabidopsis thaliana RepID=Q8L947_ARATH
Length = 222
Score = 66.6 bits (161), Expect = 1e-09
Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Frame = -3
Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPS 187
E+ + Y RR LQ+L DR Y VSD ++++S DF++ +GE ++L I H+ D +
Sbjct: 23 EESHRYYLARRNGLQILRDRGYEVSDEDINLSLHDFRTVYGERPDVDRLRISALHRSDST 82
Query: 186 ERVCVFFFDEAKLGVGVVKS-ITNRMGTENFTRGILVCQKPFSPQAKTAVATFN 28
++V + FF + + V ++S + + + E T ILV Q + QA A+ F+
Sbjct: 83 KKVKIVFFGTSMVKVNAIRSVVADILSQETITGLILVLQNHVTNQALKAIELFS 136
[96][TOP]
>UniRef100_Q8CI23 Polymerase (RNA) II (DNA directed) polypeptide E n=1 Tax=Mus
musculus RepID=Q8CI23_MOUSE
Length = 96
Score = 66.2 bits (160), Expect = 2e-09
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+E+ +L+KIR+TI+Q+ DR Y V+ EL + ++FK++FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLV 62
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKS 127
H DDP++++ VFF EA GVV S
Sbjct: 63 AHNDDPTDQMFVFFPGEALGLAGVVSS 89
[97][TOP]
>UniRef100_B4GWF6 GL16452 n=1 Tax=Drosophila persimilis RepID=B4GWF6_DROPE
Length = 126
Score = 66.2 bits (160), Expect = 2e-09
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEIQK 208
D+ ++ KL+ IR+T+ +M DR Y V+ EL + + F FG+ R L +
Sbjct: 7 DEAEIYKLWHIRKTVFEMSHDRGYLVTQGELDQTVEQFTELFGDKPSEQRPMRSDLTMVL 66
Query: 207 THKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVC 76
TH DDP R+ VFF +E K+ V +K+ NRM F G VC
Sbjct: 67 THADDPKNRMLVFFPEEPKVAVRTIKAFANRMRPRTFI-GPSVC 109
[98][TOP]
>UniRef100_B9ST46 DNA-directed RNA polymerase II, putative n=1 Tax=Ricinus communis
RepID=B9ST46_RICCO
Length = 238
Score = 65.9 bits (159), Expect = 2e-09
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
+ Y RRT+L+ML DR YSV +E+ +S ++F++ G + ++L+ TH DPS+R+
Sbjct: 43 RYYLSRRTVLEMLRDRGYSVPSSEIDLSLQEFRAIHGPNPDIDRLKFSATHTSDPSKRML 102
Query: 174 VFFFDEAKLGVGVVKSITNR-MGTENFTRGILVCQKPFSPQAKTAVATF 31
V F + V +++I + + ++ T ILV Q + QA AV F
Sbjct: 103 VLFGGPGIIKVSTIRAIAGQIVNKDSLTGLILVLQNQITNQAMKAVDLF 151
[99][TOP]
>UniRef100_Q4YN15 DNA-directed RNA polymerase 2, putative (Fragment) n=1
Tax=Plasmodium berghei RepID=Q4YN15_PLABE
Length = 107
Score = 65.5 bits (158), Expect = 3e-09
Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
++ VT+ YK R+T +ML DR Y ++ E + FK F E+ + R ++ I +HK+D
Sbjct: 2 EDPVTRFYKCRKTCCEMLEDRGYIITAREKLENFAAFKELFEENEKLRSRMTIITSHKND 61
Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSP 58
+ ++ V+F DE K GV ++ +T +M ++ R ILV Q +P
Sbjct: 62 ANNKIIVYFVDEVKKTGVKPLRELTEKMDEKSIQRAILVTQNTLTP 107
[100][TOP]
>UniRef100_Q9LKX4 RPB5d n=1 Tax=Brassica napus RepID=Q9LKX4_BRANA
Length = 223
Score = 64.3 bits (155), Expect = 7e-09
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = -3
Query: 363 DVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSE 184
D Y RRT ++ML DR Y +S+ +++++ ++F++ +G+ ++L I H D S+
Sbjct: 24 DSHSYYLARRTTMEMLRDRGYDISNEDINLTLQEFRALYGDRPNVDRLRISAQHCSDSSK 83
Query: 183 RVCVFFFDEAKLGVGVVKSI-TNRMGTENFTRGILVCQKPFSPQAKTAVATFN 28
++ V F + V ++ I + +G EN T ILV Q + QA AV F+
Sbjct: 84 KIAVVFCGSGIVKVSAIRDIAADVLGRENLTGLILVLQSDITNQALKAVELFS 136
[101][TOP]
>UniRef100_Q5CNJ4 DNA-directed RNA polymerase 2 n=2 Tax=Cryptosporidium
RepID=Q5CNJ4_CRYHO
Length = 205
Score = 63.9 bits (154), Expect = 9e-09
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
D + ++ RRT+ +ML DR Y VS + FK F H R R ++ + +H+ D
Sbjct: 2 DSSDNRFFRARRTLCEMLEDRGYIVSSQDKEEDFSTFKERFESHQRLRSRMLMVASHRQD 61
Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
++R+ +F DE+ K GV ++ I +M R IL+ Q + AK A+
Sbjct: 62 QTKRIICYFADESKKTGVKPIRDIVEKMDEHAIQRAILISQNVLTAHAKVAI 113
[102][TOP]
>UniRef100_B5LZ31 RNA polymerase II (Fragment) n=1 Tax=Psetta maxima
RepID=B5LZ31_PSEMX
Length = 87
Score = 63.5 bits (153), Expect = 1e-08
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = -3
Query: 285 ELSMSRKDFKSEFGE-----HFRREQLEIQKTHKDDPSERVCVFFFDEAKLGVGVVKSIT 121
EL + +FKS+FG+ RR L + H DDP++++ VFF +E K+G+ +K
Sbjct: 3 ELDQTLDEFKSQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKMYC 62
Query: 120 NRMGTENFTRGILVCQKPFSPQAK 49
RM EN TR I+V Q +P AK
Sbjct: 63 QRMQEENITRAIIVVQMGMTPSAK 86
[103][TOP]
>UniRef100_B0D9Y7 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0D9Y7_LACBS
Length = 208
Score = 63.2 bits (152), Expect = 2e-08
Identities = 32/114 (28%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEH---FRREQLEIQKTH 202
D ++ KL+K+ RTI +++ DR + VSD E+ M + F+S + + R QL T
Sbjct: 3 DVDETAKLWKVNRTIHELVKDRGFLVSDDEIHMDLQRFRSLYANNSGVVDRNQLNFYTTS 62
Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
+ + ++++ VFF +E +GV ++ + + ++ RGI+V +P A+ +
Sbjct: 63 RTNSTDQIFVFFSEEKSVGVKTMRKLLGILEEKSIQRGIIVFPGNMTPSARKVI 116
[104][TOP]
>UniRef100_Q757H7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Eremothecium gossypii RepID=RPAB1_ASHGO
Length = 215
Score = 63.2 bits (152), Expect = 2e-08
Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 14/138 (10%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEI------- 214
++ +V++L++ RT+ +M+ DR Y ++ E+ +S +DFK+++ + R Q ++
Sbjct: 5 NERNVSRLWRAFRTVKEMVRDRGYFITQEEVDLSLEDFKAKYCDSMGRPQRKMMSFQSNP 64
Query: 213 -QKTHKDDPS-ERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQA---- 52
++T K P+ V V F DE +G+ +K+ +G +NF GI + Q +P A
Sbjct: 65 TEETLKKSPNMGSVWVEFCDEPSVGIKTMKNFVIHIGEKNFQTGIFIYQNGITPSALKLL 124
Query: 51 -KTAVATFNNFSASRLEV 1
A AT F+ + L V
Sbjct: 125 PSVAPATIETFNETALVV 142
[105][TOP]
>UniRef100_Q4P7S7 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4P7S7_USTMA
Length = 554
Score = 62.8 bits (151), Expect = 2e-08
Identities = 30/114 (26%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEF---GEHFRREQLEIQKTH 202
DD + +L+++ RTI +++ DR Y V+D E+S+ + FK+E+ G R +L H
Sbjct: 3 DDRETVRLWRVNRTIHELVRDRGYQVADDEISVDLETFKAEYAPTGGSVDRNKLNFFTEH 62
Query: 201 KDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
+ ++R+ VF+ + +GV ++ + M + RGI++ + + A+ +
Sbjct: 63 GEHENQRLFVFYSSDRNVGVKTMRQFISIMEERDIQRGIIIWPEKMTSAARKVI 116
[106][TOP]
>UniRef100_A7QJL2 Chromosome chr8 scaffold_106, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QJL2_VITVI
Length = 229
Score = 62.4 bits (150), Expect = 3e-08
Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
+ Y RRT+L+ML DR YS+ ++ +S +DF+S + + ++L I + DPS+++
Sbjct: 34 RYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLRISAALRSDPSKKIL 93
Query: 174 VFFFDEAKLGVGVVKSI-TNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRLEV 1
V F + V ++SI T + ++ ++ ILV Q + QA AV F +F + ++
Sbjct: 94 VIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAVDLF-SFQVEKFQI 151
[107][TOP]
>UniRef100_A2Q2Z5 RNA polymerase subunit, RPB5; RNA polymerase Rpb5, N-terminal n=1
Tax=Medicago truncatula RepID=A2Q2Z5_MEDTR
Length = 248
Score = 62.0 bits (149), Expect = 3e-08
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
+ Y RRT+L+ML DR YS+ E+ +S DF+ G+ ++L + TH +PS+R+
Sbjct: 53 RYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLRLTATHATNPSKRIL 112
Query: 174 VFFFDEAKLGVGVVKSITNR-MGTENFTRGILVCQKPFSPQAKTAV 40
V F + V V+ I + + E+ T IL+ Q + QA AV
Sbjct: 113 VVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKAV 158
[108][TOP]
>UniRef100_A9UR01 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UR01_MONBE
Length = 210
Score = 60.8 bits (146), Expect = 8e-08
Identities = 34/112 (30%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRRE-QLEIQKTHKD 196
D+ + +LYK+ T+ QM DR + V+ ++M+ + +GE+ R+E +QK D
Sbjct: 3 DEAERYRLYKVWITLKQMCHDRGFRVTQEMMNMTFDTWNEIYGEYPRKELSFPVQKV--D 60
Query: 195 DPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
D ++ + VFF + + V +KS+ +R+ ++N R I+V Q+ +P AK+ +
Sbjct: 61 DDNDGLFVFFPESPDVKVAAIKSLYDRLKSDNLRRAIIVYQRKVAPVAKSHI 112
[109][TOP]
>UniRef100_A7APR4 RNA polymerase Rpb5, N-terminal domain containing protein n=1
Tax=Babesia bovis RepID=A7APR4_BABBO
Length = 205
Score = 59.7 bits (143), Expect = 2e-07
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
D++ +L++ RRT +ML DR Y + + E + +FK+ + + R R ++ + + K D
Sbjct: 2 DDEEGRLFRCRRTCCEMLEDRGYFIPNQERLETFAEFKARYELYDRVRSKMLLVASLKTD 61
Query: 192 PSERVCVFFFDEA-KLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
++ V+F DE K GV ++ +T +M + R ILV Q +P AK A+
Sbjct: 62 KDAKLLVYFADETKKTGVKPIRELTEKMEDHDIHRAILVTQNVLTPFAKDAI 113
[110][TOP]
>UniRef100_UPI0001985D3D PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001985D3D
Length = 1260
Score = 59.3 bits (142), Expect = 2e-07
Identities = 34/105 (32%), Positives = 55/105 (52%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
+ Y RRT+ QML+DR Y+V +EL+ S DF++ FG + +L I PS+++
Sbjct: 27 RYYLSRRTLFQMLSDRGYNVPHSELTRSLSDFRASFGHNPDPSRLRICLPLISSPSKKIL 86
Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
V F ++ V++ I ++ E R ILV Q + A+ V
Sbjct: 87 VVFCGTDEIRKAVIRVIFQQINREGLHRLILVLQSKMNSHARKVV 131
[111][TOP]
>UniRef100_A7Q5P2 Chromosome undetermined scaffold_53, whole genome shotgun sequence
n=1 Tax=Vitis vinifera RepID=A7Q5P2_VITVI
Length = 221
Score = 59.3 bits (142), Expect = 2e-07
Identities = 34/105 (32%), Positives = 55/105 (52%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
+ Y RRT+ QML+DR Y+V +EL+ S DF++ FG + +L I PS+++
Sbjct: 27 RYYLSRRTLFQMLSDRGYNVPHSELTRSLSDFRASFGHNPDPSRLRICLPLISSPSKKIL 86
Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
V F ++ V++ I ++ E R ILV Q + A+ V
Sbjct: 87 VVFCGTDEIRKAVIRVIFQQINREGLHRLILVLQSKMNSHARKVV 131
[112][TOP]
>UniRef100_C5DNB3 KLTH0G15598p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DNB3_LACTC
Length = 215
Score = 58.9 bits (141), Expect = 3e-07
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193
++ +V++L++ +T+ +M+ DR Y ++ E+ +S +DFK+++ + R Q ++ +
Sbjct: 5 NERNVSRLWRAFKTVKEMVRDRGYFITQEEVDLSLEDFKAKYCDSMGRPQRKMMSFQSNP 64
Query: 192 PSERVCVF---------FFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQA---- 52
E + F F DEA +G+ +K+ + +NF GI V Q +P A
Sbjct: 65 VEEALEKFPNMGSLWVEFCDEASVGIKTMKNFVIHISEKNFQTGIFVYQNGVTPSAMKLL 124
Query: 51 -KTAVATFNNFSASRLEV 1
A AT F + L V
Sbjct: 125 PSVAPATIETFHEASLVV 142
[113][TOP]
>UniRef100_UPI00004E3EE0 RNA polymerase II core subunit n=1 Tax=Dictyostelium discoideum AX4
RepID=UPI00004E3EE0
Length = 181
Score = 58.5 bits (140), Expect = 4e-07
Identities = 37/106 (34%), Positives = 53/106 (50%)
Frame = -3
Query: 321 MLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVCVFFFDEAKLGV 142
ML+DR Y ++ E R+ F S RE L + KDDP++ + VFF D K+GV
Sbjct: 1 MLSDREYIITAYEQEYPRESFVS-------RENLTMYCVKKDDPTDSIYVFFPDTPKVGV 53
Query: 141 GVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRLE 4
+K + M R I+V Q+ +P AK A+A F+ LE
Sbjct: 54 TQIKKYVDIMKDRQANRAIIVVQQNITPFAKQALAEFSQEKKITLE 99
[114][TOP]
>UniRef100_Q9M1H8 RNA polymerase 24kDa subunit-like protein n=1 Tax=Arabidopsis
thaliana RepID=Q9M1H8_ARATH
Length = 233
Score = 58.2 bits (139), Expect = 5e-07
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
+ Y R T +ML DR Y V++ ELS++ +F+S FGE E+L I + DP +++
Sbjct: 38 RFYLARTTAFEMLRDRGYEVNEAELSLTLSEFRSVFGEKPELERLRICVPLRSDPKKKIL 97
Query: 174 VFFFDEAKLGVGVVKS----ITNRMGTENFTRGILVCQKPFSPQAKTAVATF 31
V F + V V++ I+N +G ILV Q + A+ A+ TF
Sbjct: 98 VVFMGTEPITVKSVRALHIQISNNVGLHAM---ILVLQSKMNHFAQKALTTF 146
[115][TOP]
>UniRef100_P20434 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=5
Tax=Saccharomyces cerevisiae RepID=RPAB1_YEAST
Length = 215
Score = 58.2 bits (139), Expect = 5e-07
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193
++ ++++L++ RT+ +M+ DR Y ++ E+ + +DFK+++ + R Q ++ +
Sbjct: 5 NERNISRLWRAFRTVKEMVKDRGYFITQEEVELPLEDFKAKYCDSMGRPQRKMMSFQANP 64
Query: 192 PSERVCVF---------FFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
E + F F DE +GV +K+ + +NF GI V Q +P A V
Sbjct: 65 TEESISKFPDMGSLWVEFCDEPSVGVKTMKTFVIHIQEKNFQTGIFVYQNNITPSAMKLV 124
Query: 39 -----ATFNNFSASRLEV 1
AT F+ + L V
Sbjct: 125 PSIPPATIETFNEAALVV 142
[116][TOP]
>UniRef100_Q4N141 DNA-directed RNA polymerase II, putative n=1 Tax=Theileria parva
RepID=Q4N141_THEPA
Length = 205
Score = 57.8 bits (138), Expect = 6e-07
Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
D++ +L++ RRT +ML DR Y + E + +FK+ + H + R ++ + + +
Sbjct: 2 DDEEGRLFRCRRTCCEMLEDRGYFIPVQEKLETFAEFKARYEMHEKVRSKMLLVASQRTA 61
Query: 192 PSERVCVFFFDE-AKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
++ V+F DE K GV ++ +T RM + R ILV Q +P AK A+
Sbjct: 62 SENKLLVYFADEKKKTGVKPIRELTERMEDHDIHRAILVTQNVLTPFAKDAI 113
[117][TOP]
>UniRef100_C4YG42 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Candida
albicans RepID=C4YG42_CANAL
Length = 214
Score = 57.8 bits (138), Expect = 6e-07
Identities = 33/121 (27%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199
D V++L++ +T+ +M+ DR Y +S EL M+ ++F+S+ + +R+Q+ Q T
Sbjct: 5 DRAVSRLFRSFKTVKEMVRDRGYYISQEELDMTLEEFRSKICDSMGTPQRKQMCFQATPT 64
Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
+ E+ + V F DEA +G+ +++ + +NF+ GI + Q +P A +
Sbjct: 65 AETLEKFPETGSLWVEFCDEASVGIKTMRNFCIHITEKNFSTGIFIYQNSMTPSANKLIP 124
Query: 36 T 34
T
Sbjct: 125 T 125
[118][TOP]
>UniRef100_A3GI06 DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase
II subunit 5) n=1 Tax=Pichia stipitis RepID=A3GI06_PICST
Length = 213
Score = 57.8 bits (138), Expect = 6e-07
Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193
DD V++L++ +T+ +M+ DR Y ++ E+ MS +F+++ + R Q ++ +
Sbjct: 3 DDRTVSRLFRSFKTVKEMVRDRGYYITQEEVDMSLDEFRAKICDSMGRPQRKLMCFQANP 62
Query: 192 PSERVCVF---------FFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
+E + F F DEA +G+ +++ + +NF+ GI + Q +P A +
Sbjct: 63 TAESLDKFPDLGSLWVEFCDEASVGIKTMRNFCIHISEKNFSTGIFIYQNSITPSANKLI 122
Query: 39 AT 34
T
Sbjct: 123 PT 124
[119][TOP]
>UniRef100_Q6CJ62 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Kluyveromyces lactis RepID=RPAB1_KLULA
Length = 215
Score = 57.4 bits (137), Expect = 8e-07
Identities = 30/121 (24%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199
+ ++++L++ +T+ +M+ DR Y ++ E+ +S +DFK+++ + +R+ + Q
Sbjct: 6 ERNISRLWRAFKTVKEMVRDRGYFITQEEIDLSLEDFKAKYCDSMGKPQRKMMSFQSNPT 65
Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
++ E+ + V F DEA +GV +K+ + +NF GI + Q +P A +
Sbjct: 66 EESIEKFPEMGSLWVEFCDEASVGVKTMKNFVVHITEKNFQTGIFIYQSGITPSANKILP 125
Query: 36 T 34
T
Sbjct: 126 T 126
[120][TOP]
>UniRef100_Q2RAP1 Os11g0143400 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q2RAP1_ORYSJ
Length = 227
Score = 57.0 bits (136), Expect = 1e-06
Identities = 31/111 (27%), Positives = 58/111 (52%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
+L+ RRT ++ML DR YSV + E++ + +F++ + E E+L T DPS++V
Sbjct: 32 RLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLAFTTTLVSDPSKKVQ 91
Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNF 22
+ F + + ++ I + EN +R +L+ Q +A+ A+ F
Sbjct: 92 LVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIKEIFKF 142
[121][TOP]
>UniRef100_Q2QXY2 RNA polymerase Rpb5, N-terminal domain containing protein,
expressed n=1 Tax=Oryza sativa Japonica Group
RepID=Q2QXY2_ORYSJ
Length = 335
Score = 57.0 bits (136), Expect = 1e-06
Identities = 31/111 (27%), Positives = 58/111 (52%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
+L+ RRT ++ML DR YSV + E++ + +F++ + E E+L T DPS++V
Sbjct: 140 RLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLAFTTTLVSDPSKKVQ 199
Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNF 22
+ F + + ++ I + EN +R +L+ Q +A+ A+ F
Sbjct: 200 LVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIKEIFKF 250
[122][TOP]
>UniRef100_Q0IQ77 Os12g0139500 protein n=2 Tax=Oryza sativa RepID=Q0IQ77_ORYSJ
Length = 227
Score = 57.0 bits (136), Expect = 1e-06
Identities = 31/111 (27%), Positives = 58/111 (52%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
+L+ RRT ++ML DR YSV + E++ + +F++ + E E+L T DPS++V
Sbjct: 32 RLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLAFTTTLVSDPSKKVQ 91
Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNF 22
+ F + + ++ I + EN +R +L+ Q +A+ A+ F
Sbjct: 92 LVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIKEIFKF 142
[123][TOP]
>UniRef100_A2ZBC5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2ZBC5_ORYSI
Length = 227
Score = 57.0 bits (136), Expect = 1e-06
Identities = 31/111 (27%), Positives = 58/111 (52%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
+L+ RRT ++ML DR YSV + E++ + +F++ + E E+L T DPS++V
Sbjct: 32 RLFLARRTAMEMLRDRGYSVPEAEIARTPPEFRAWWAEKPGIERLAFTTTLVSDPSKKVQ 91
Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNF 22
+ F + + ++ I + EN +R +L+ Q +A+ A+ F
Sbjct: 92 LVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIKEIFKF 142
[124][TOP]
>UniRef100_B9W9S0 DNA-directed RNA polymerases I, II and III subunit, putative n=1
Tax=Candida dubliniensis CD36 RepID=B9W9S0_CANDC
Length = 214
Score = 57.0 bits (136), Expect = 1e-06
Identities = 32/121 (26%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199
D V++L++ +T+ +M+ DR Y +S EL M+ ++F+S+ + +R+Q+ Q T
Sbjct: 5 DRAVSRLFRSFKTVKEMVRDRGYYISQEELDMTLEEFRSKICDSMGTPQRKQMCFQATPT 64
Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
+ E+ + V F DE+ +G+ +++ + +NF+ GI + Q +P A +
Sbjct: 65 GETLEKFPETGSLWVEFCDESSVGIKTMRNFCIHITEKNFSTGIFIYQNSMTPSANKLIP 124
Query: 36 T 34
T
Sbjct: 125 T 125
[125][TOP]
>UniRef100_UPI0001B7AB22 UPI0001B7AB22 related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7AB22
Length = 79
Score = 56.6 bits (135), Expect = 1e-06
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQ--MLADRNYSVSDTELSMSRKDFKSEFGE-----HFRREQLEI 214
D+E+ +L+KIR+TI+Q + DR Y V+ EL + ++FK++FG+ RR L +
Sbjct: 3 DEEETYRLWKIRKTIMQATLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV 62
Query: 213 QKTHKDDPSERVCVFF 166
H DDP++++ VFF
Sbjct: 63 LVAHNDDPTDQMFVFF 78
[126][TOP]
>UniRef100_C5Y4H1 Putative uncharacterized protein Sb05g002600 n=1 Tax=Sorghum
bicolor RepID=C5Y4H1_SORBI
Length = 263
Score = 56.6 bits (135), Expect = 1e-06
Identities = 31/105 (29%), Positives = 56/105 (53%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
+L+ RRT L+ML DR Y+V + EL+ + +F++ + + E+L T DPS +V
Sbjct: 68 RLFLARRTALEMLRDRGYAVPEDELARTLPEFRAWWEDKPELERLAFSTTLASDPSSKVK 127
Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
V F + + ++ + + EN +R IL+ Q +A+ A+
Sbjct: 128 VVFCPPEPVKIAAIRVVYTGVKDENLSRLILILQGRIMSKAREAI 172
[127][TOP]
>UniRef100_C5DR69 ZYRO0B06006p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DR69_ZYGRC
Length = 215
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 14/138 (10%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193
++ ++++L++ +T+ +M+ DR Y ++ E+ + +DFK+++ + R Q ++ +
Sbjct: 5 NERNISRLWRTFKTVKEMVKDRGYFIAQEEIELPLEDFKAKYCDSMGRPQRKMMSFQSNP 64
Query: 192 PSERVCVF---------FFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
E + F F DE +GV +K+ + +NF GI V Q +P A V
Sbjct: 65 TEESIAKFPSMGSLWVEFCDEPTVGVKTMKTFVIHIQEKNFQTGIFVYQNNVTPSAMKLV 124
Query: 39 -----ATFNNFSASRLEV 1
AT F + L V
Sbjct: 125 PSIPPATIETFHEASLVV 142
[128][TOP]
>UniRef100_Q9P4B9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Kluyveromyces marxianus RepID=RPAB1_KLUMA
Length = 215
Score = 56.6 bits (135), Expect = 1e-06
Identities = 31/121 (25%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199
+ +++L++ RT+ +M+ DR Y ++ E+ +S +DFK ++ + +R+ + Q
Sbjct: 6 ERGISRLWRAFRTVKEMVRDRGYFITQEEIDLSLEDFKVKYCDSMGKPQRKMMSFQSNPT 65
Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
++ E+ + V F DEA +GV +K+ + +NF GI + Q +P A +
Sbjct: 66 EESIEKFPEMGSLWVEFCDEASVGVKTMKNFVVHITEKNFQTGIFIYQSGITPSANKILP 125
Query: 36 T 34
T
Sbjct: 126 T 126
[129][TOP]
>UniRef100_C6SXN9 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SXN9_SOYBN
Length = 237
Score = 56.2 bits (134), Expect = 2e-06
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
+ Y RRT L+ML DR YS+ E+ +S DF+ G+ ++L + TH + S+R+
Sbjct: 42 RYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIHGQFPDPDRLRLSLTHATNSSKRIL 101
Query: 174 VFFFDEAKLGVGVVK--SITNRMG----TENFTRGILVCQKPFSPQAKTAVATFN 28
V F G GVVK +I N G + T IL+ + + QA AV F+
Sbjct: 102 VIF-----CGPGVVKVTAIRNTAGQIINRDTLTGLILIVENHITSQALKAVNLFS 151
[130][TOP]
>UniRef100_B6TJI5 DNA-directed RNA polymerase II 23 kDa polypeptide n=1 Tax=Zea mays
RepID=B6TJI5_MAIZE
Length = 264
Score = 55.8 bits (133), Expect = 2e-06
Identities = 31/118 (26%), Positives = 56/118 (47%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
+L+ RRT L+ML DR Y+V + EL+ + +F++ + E+L T DPS +V
Sbjct: 69 RLFLARRTALEMLRDRGYAVPEEELARTLPEFRAWWEYRPELERLAFSTTLASDPSSKVK 128
Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRLEV 1
V F + + ++ I + EN +R IL+ Q + ++ F ++
Sbjct: 129 VVFCPPGPVKIAAIRLIYTEVKDENLSRLILILQGKIMSTTRESIKEIFRFKVDTFQI 186
[131][TOP]
>UniRef100_B4FYH9 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FYH9_MAIZE
Length = 248
Score = 55.8 bits (133), Expect = 2e-06
Identities = 31/118 (26%), Positives = 56/118 (47%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
+L+ RRT L+ML DR Y+V + EL+ + +F++ + E+L T DPS +V
Sbjct: 53 RLFLARRTALEMLRDRGYAVPEEELARTLPEFRAWWEYRPELERLAFSTTLTSDPSSKVK 112
Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRLEV 1
V F + + ++ I + EN +R IL+ Q + ++ F ++
Sbjct: 113 VVFCPPGPVKIAAIRLIYTEVKDENLSRLILILQGKIMSTTRESIKEIFRFKVDTFQI 170
[132][TOP]
>UniRef100_Q6FQA6 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Candida glabrata RepID=RPAB1_CANGA
Length = 215
Score = 55.8 bits (133), Expect = 2e-06
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Frame = -3
Query: 372 DDEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDD 193
+D +++L++ RT+ +M+ DR Y ++ EL ++ +DFK ++ + R Q ++ +
Sbjct: 5 NDRSISRLWRTFRTVKEMVRDRGYFIAQEELDLTLEDFKVKYCDSMGRAQRKMMSFQANP 64
Query: 192 PSERVCVF---------FFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
E + F F DE +GV +K+ + + F GI + Q +P A V
Sbjct: 65 TEESMTKFPDMGTLWVEFCDEPSVGVKTMKTFVIHIQEKQFQTGIFIYQNNITPSAMKLV 124
Query: 39 -----ATFNNFSASRLEV 1
AT F + L V
Sbjct: 125 PSIPPATIETFHEAALVV 142
[133][TOP]
>UniRef100_Q4U8E3 DNA-directed RNA polymerase, subunit (RPB5 homologue), putative n=1
Tax=Theileria annulata RepID=Q4U8E3_THEAN
Length = 205
Score = 55.5 bits (132), Expect = 3e-06
Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFR-REQLEIQKTHKDD 193
D++ +L++ RRT +ML DR Y + E + +FK+ + + + R ++ + + +
Sbjct: 2 DDEEGRLFRCRRTCCEMLEDRGYFIPSQEKLETFAEFKARYEMYDKVRSKMLLVASLRTA 61
Query: 192 PSERVCVFFFDE-AKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV 40
++ V+F DE K GV ++ +T RM + R ILV Q +P AK A+
Sbjct: 62 AENKLLVYFADEKKKTGVKPIRELTERMEDHDIHRAILVTQNVLTPFAKDAI 113
[134][TOP]
>UniRef100_A7TEH4 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TEH4_VANPO
Length = 215
Score = 54.7 bits (130), Expect = 5e-06
Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199
+ +++L++ RT+ +M+ DR Y ++ E+ +S +DFK+++ + +R+ + Q
Sbjct: 6 ERSISRLWRTFRTVKEMVRDRGYFIAQEEIDLSLEDFKAKYCDSMGRPQRKMMSFQANPT 65
Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAV- 40
++ E+ + V F DE +GV +K+ + +N+ GI V Q +P A V
Sbjct: 66 EETMEKFPTMSSLWVEFCDEPSVGVKTMKNFVIHIQEKNYQTGIFVYQTNVTPSAMKLVP 125
Query: 39 ----ATFNNFSASRLEV 1
AT F + L V
Sbjct: 126 SIPPATIETFHEASLIV 142
[135][TOP]
>UniRef100_B0EA74 DNA-directed RNA polymerases I, II, and III subunit RPABC1,
putative n=1 Tax=Entamoeba dispar SAW760
RepID=B0EA74_ENTDI
Length = 204
Score = 54.3 bits (129), Expect = 7e-06
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Frame = -3
Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEF---GEHFRREQLEIQKTHKD 196
E+VT +Y+ +T+L+ML DR Y S+ + + + + FK F GE ++L I+ ++
Sbjct: 2 ENVTHIYRAWKTVLEMLRDRGYITSEEDHNTTLEGFKERFYKGGEGVDHKELTIKVVKEN 61
Query: 195 DPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAK 49
D ++ + VFF + L V+ + +E+ R I+V + S K
Sbjct: 62 DATDGIIVFFAEGVSLKTDVLGKYLTEVESEHVKRAIIVYRGKLSSPVK 110
[136][TOP]
>UniRef100_B6SJT2 DNA-directed RNA polymerase II 23 kDa polypeptide n=1 Tax=Zea mays
RepID=B6SJT2_MAIZE
Length = 154
Score = 53.9 bits (128), Expect = 9e-06
Identities = 31/118 (26%), Positives = 54/118 (45%)
Frame = -3
Query: 354 KLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHFRREQLEIQKTHKDDPSERVC 175
+L+ RRT L+ML DR Y+V + EL+ + +F++ E+L T DPS +V
Sbjct: 12 RLFLARRTALEMLXDRGYAVPEEELARTLPEFRAWXEYXPELERLAFXTTLTSDPSSKVK 71
Query: 174 VFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVATFNNFSASRLEV 1
V F + + ++ I + EN R IL+ Q + ++ F ++
Sbjct: 72 VVFCPPGPVKIAAIRLIYTEVKDENLARLILILQGKIMSPTRESIKEIFRFKVDTFQI 129
[137][TOP]
>UniRef100_C4LW54 RNA polymerase subunit Rpb5, putative n=1 Tax=Entamoeba histolytica
HM-1:IMSS RepID=C4LW54_ENTHI
Length = 204
Score = 53.9 bits (128), Expect = 9e-06
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Frame = -3
Query: 366 EDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEF---GEHFRREQLEIQKTHKD 196
E VT +Y+ +T+L+ML DR Y S+ + + + + FK F GE ++L I+ ++
Sbjct: 2 ESVTHIYRAWKTVLEMLRDRGYITSEEDHNTTLEGFKERFYKGGEGVDHKELTIKVVKEN 61
Query: 195 DPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAK 49
D ++ + VFF + L V+ + +E+ R I+V + S K
Sbjct: 62 DATDGIIVFFAEGVSLKTDVLGKYLTEVESEHVKRAIIVYRGKLSSPVK 110
[138][TOP]
>UniRef100_Q5KN51 DNA-directed RNA polymerases ii 24 kDa polypeptide, putative n=1
Tax=Filobasidiella neoformans RepID=Q5KN51_CRYNE
Length = 221
Score = 53.9 bits (128), Expect = 9e-06
Identities = 27/121 (22%), Positives = 60/121 (49%), Gaps = 14/121 (11%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFG--------------EHFR 232
+ ++ +L+++ RT+ +M+ DR Y ++D E+++S ++FK G +
Sbjct: 6 NRELARLWRVSRTVHEMVRDRGYLLADYEINVSFEEFKDRHGATGSVEWMKCPQADKSSS 65
Query: 231 REQLEIQKTHKDDPSERVCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQA 52
R + H++D ++++ V+F + + +K+ M RGI++ + SP A
Sbjct: 66 RSNMSFDAIHENDNTDKIFVYFCADKNVSKASMKTFIGSMDKMGARRGIIIWSEKMSPAA 125
Query: 51 K 49
K
Sbjct: 126 K 126
[139][TOP]
>UniRef100_C5MBX4 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Candida
tropicalis MYA-3404 RepID=C5MBX4_CANTT
Length = 214
Score = 53.9 bits (128), Expect = 9e-06
Identities = 28/121 (23%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Frame = -3
Query: 369 DEDVTKLYKIRRTILQMLADRNYSVSDTELSMSRKDFKSEFGEHF---RREQLEIQKTHK 199
D +++L++ +T+ +M+ DR Y +S E+ M+ ++F+S+ + +R+Q+ Q
Sbjct: 5 DRSISRLFRTFKTVKEMVRDRGYYISQEEIDMTLEEFRSKICDSMGNPQRKQMCFQAQPT 64
Query: 198 DDPSER------VCVFFFDEAKLGVGVVKSITNRMGTENFTRGILVCQKPFSPQAKTAVA 37
+ E+ + V F DE+ +G+ +++ + +NF+ G+ + Q +P A +
Sbjct: 65 GETLEKFPELGSLWVEFCDESSVGIKTMRNFCIHITEKNFSTGLFIYQNSITPSANKLIP 124
Query: 36 T 34
T
Sbjct: 125 T 125