[UP]
BLASTX 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BB922492 RCE29808
(571 letters)
Database: uniref100
9,526,577 sequences; 3,332,566,763 total letters
Searching..................................................done
significant alignments:[graphical|details]
UniRef100_A2Q2Z5 RNA polymerase subunit, RPB5; RNA polymerase Rp... 226 7e-58
UniRef100_C6SXN9 Putative uncharacterized protein n=1 Tax=Glycin... 216 7e-55
UniRef100_B9ST46 DNA-directed RNA polymerase II, putative n=1 Ta... 194 4e-48
UniRef100_B9IHS9 Predicted protein n=1 Tax=Populus trichocarpa R... 183 9e-45
UniRef100_A7QJL2 Chromosome chr8 scaffold_106, whole genome shot... 182 1e-44
UniRef100_Q9M1J2 Putative uncharacterized protein F24I3.160 n=1 ... 169 1e-40
UniRef100_Q8L947 Putative DNA-directed RNA polymerase 23kD subun... 169 1e-40
UniRef100_Q9ZVB9 Putative DNA-directed RNA polymerase 23kD subun... 162 1e-38
UniRef100_Q9LKX4 RPB5d n=1 Tax=Brassica napus RepID=Q9LKX4_BRANA 153 1e-35
UniRef100_B9GM22 Predicted protein n=1 Tax=Populus trichocarpa R... 145 2e-33
UniRef100_B9RGC5 DNA-directed RNA polymerase II, putative n=1 Ta... 142 2e-32
UniRef100_Q2QXY2 RNA polymerase Rpb5, N-terminal domain containi... 140 9e-32
UniRef100_Q0IQ77 Os12g0139500 protein n=2 Tax=Oryza sativa RepID... 140 9e-32
UniRef100_Q2RAP1 Os11g0143400 protein n=1 Tax=Oryza sativa Japon... 137 4e-31
UniRef100_Q2HW77 RNA polymerase subunit, RPB5; RNA polymerase Rp... 137 4e-31
UniRef100_A2ZBC5 Putative uncharacterized protein n=1 Tax=Oryza ... 137 4e-31
UniRef100_C5Y4H1 Putative uncharacterized protein Sb05g002600 n=... 135 3e-30
UniRef100_B6TJI5 DNA-directed RNA polymerase II 23 kDa polypepti... 132 2e-29
UniRef100_B4FYH9 Putative uncharacterized protein n=1 Tax=Zea ma... 132 2e-29
UniRef100_A7Q5P2 Chromosome undetermined scaffold_53, whole geno... 129 1e-28
UniRef100_UPI0001985D3D PREDICTED: hypothetical protein n=1 Tax=... 129 2e-28
UniRef100_A5B0H1 Putative uncharacterized protein n=1 Tax=Vitis ... 129 2e-28
UniRef100_Q9M1H8 RNA polymerase 24kDa subunit-like protein n=1 T... 108 3e-22
UniRef100_B9N7D1 Predicted protein n=1 Tax=Populus trichocarpa R... 106 1e-21
UniRef100_B3TLL2 DNA-directed RNA polymerases II 24 kDa polypept... 105 2e-21
UniRef100_C6SXZ4 Putative uncharacterized protein n=1 Tax=Glycin... 104 4e-21
UniRef100_C6SVA4 Putative uncharacterized protein n=1 Tax=Glycin... 104 4e-21
UniRef100_A7PEL2 Chromosome chr11 scaffold_13, whole genome shot... 104 5e-21
UniRef100_O81098 RNA polymerase I, II and III 24.3 kDa subunit n... 103 1e-20
UniRef100_B9RKM1 DNA-directed RNA polymerase II, putative n=1 Ta... 103 1e-20
UniRef100_B4FU06 DNA-directed RNA polymerases II 24 kDa polypept... 102 3e-20
UniRef100_B4FEX9 Putative uncharacterized protein n=1 Tax=Zea ma... 102 3e-20
UniRef100_A9RWG5 Predicted protein n=1 Tax=Physcomitrella patens... 102 3e-20
UniRef100_Q5VQW7 Os01g0805800 protein n=2 Tax=Oryza sativa RepID... 101 3e-20
UniRef100_Q7XUF8 OJ991113_30.8 protein n=1 Tax=Oryza sativa Japo... 100 6e-20
UniRef100_B9ETS9 Putative uncharacterized protein n=1 Tax=Oryza ... 100 8e-20
UniRef100_B4FGM1 Putative uncharacterized protein n=1 Tax=Zea ma... 100 1e-19
UniRef100_A9RKG6 Predicted protein n=1 Tax=Physcomitrella patens... 100 1e-19
UniRef100_A9BK88 Rpabc5 n=1 Tax=Cryptophyta RepID=A9BK88_9CRYP 100 1e-19
UniRef100_C5YQI4 Putative uncharacterized protein Sb08g001130 n=... 99 2e-19
UniRef100_B7FSY0 Predicted protein n=1 Tax=Phaeodactylum tricorn... 99 3e-19
UniRef100_B8LR68 Putative uncharacterized protein n=1 Tax=Picea ... 98 4e-19
UniRef100_Q5DDM1 SJCHGC05306 protein n=1 Tax=Schistosoma japonic... 97 7e-19
UniRef100_C4PZ68 DNA-directed RNA polymerase II, putative (Fragm... 97 7e-19
UniRef100_Q01A87 RNA polymerase I, II and III 24.3 kDa subunit (... 95 3e-18
UniRef100_B6KFE7 DNA-directed RNA polymerases I, II, and III sub... 95 3e-18
UniRef100_B8C1Q1 RPB5,-like protein to RNA polymerase i n=1 Tax=... 95 4e-18
UniRef100_Q4U8E3 DNA-directed RNA polymerase, subunit (RPB5 homo... 94 6e-18
UniRef100_Q4N141 DNA-directed RNA polymerase II, putative n=1 Ta... 94 6e-18
UniRef100_C5KB88 DNA-directed RNA polymerases II 24 kDa polypept... 94 6e-18
UniRef100_B6JZQ6 DNA-directed RNA polymerase I n=1 Tax=Schizosac... 94 6e-18
UniRef100_C5KHW9 DNA-directed RNA polymerases II 24 kDa polypept... 94 7e-18
UniRef100_A8NU15 Putative uncharacterized protein n=1 Tax=Coprin... 94 9e-18
UniRef100_A4RWP8 Predicted protein n=1 Tax=Ostreococcus lucimari... 93 1e-17
UniRef100_Q4XTK3 DNA-directed RNA polymerase 2, putative n=1 Tax... 93 1e-17
UniRef100_C1EDR8 Predicted protein n=1 Tax=Micromonas sp. RCC299... 93 2e-17
UniRef100_A3AV22 Putative uncharacterized protein n=2 Tax=Oryza ... 92 3e-17
UniRef100_Q8ID59 DNA-directed RNA polymerase 2, putative n=1 Tax... 92 3e-17
UniRef100_B0D9Y7 Predicted protein n=1 Tax=Laccaria bicolor S238... 92 3e-17
UniRef100_C6K8L9 RNA polymerase II B subunit n=1 Tax=Caenorhabdi... 92 4e-17
UniRef100_B3L6X3 DNA-directed RNA polymerase 2, putative n=1 Tax... 92 4e-17
UniRef100_A5K2Q3 DNA-directed RNA polymerase II 23 kDa polypepti... 92 4e-17
UniRef100_C1MXV4 Predicted protein n=1 Tax=Micromonas pusilla CC... 91 5e-17
UniRef100_A8J805 DNA-directed RNA polymerase II, 23 kDa polypept... 91 5e-17
UniRef100_Q5CNJ4 DNA-directed RNA polymerase 2 n=2 Tax=Cryptospo... 91 5e-17
UniRef100_Q98RN7 RNA polymerase I, II and III 24.3 kDa subunit n... 91 6e-17
UniRef100_C1BRK0 DNA-directed RNA polymerases I, II, and III sub... 91 6e-17
UniRef100_A8XGH1 C. briggsae CBR-RPB-5 protein n=1 Tax=Caenorhab... 91 6e-17
UniRef100_Q5KN51 DNA-directed RNA polymerases ii 24 kDa polypept... 91 6e-17
UniRef100_Q9N5K2 DNA-directed RNA polymerases I, II, and III sub... 91 6e-17
UniRef100_Q9FJL8 RNA polymerase I, II and III 24.3 kDa subunit-l... 91 8e-17
UniRef100_B6AE06 DNA-directed RNA polymerase 2, putative n=1 Tax... 91 8e-17
UniRef100_C1C1G9 DNA-directed RNA polymerases I, II, and III sub... 90 1e-16
UniRef100_Q6MY78 DNA-directed RNA polymerase, putative n=1 Tax=A... 90 1e-16
UniRef100_B0XMP1 RNA polymerase subunit n=2 Tax=Aspergillus fumi... 90 1e-16
UniRef100_A5E1U0 DNA-directed RNA polymerases II 24 kDa polypept... 90 1e-16
UniRef100_A1D205 RNA polymerase subunit n=1 Tax=Neosartorya fisc... 90 1e-16
UniRef100_A1CP51 RNA polymerase subunit n=1 Tax=Aspergillus clav... 90 1e-16
UniRef100_Q757H7 DNA-directed RNA polymerases I, II, and III sub... 90 1e-16
UniRef100_A2DNL3 RNA polymerase Rpb5, N-terminal domain containi... 89 2e-16
UniRef100_C4R3P8 RNA polymerase subunit ABC27, common to RNA pol... 89 2e-16
UniRef100_B9W9S0 DNA-directed RNA polymerases I, II and III subu... 89 2e-16
UniRef100_Q6CA26 DNA-directed RNA polymerases I, II, and III sub... 89 2e-16
UniRef100_Q59PF3 Putative uncharacterized protein RPB5 n=1 Tax=C... 89 2e-16
UniRef100_C5MBX4 DNA-directed RNA polymerases II 24 kDa polypept... 89 2e-16
UniRef100_C4YG42 DNA-directed RNA polymerases II 24 kDa polypept... 89 2e-16
UniRef100_A7APR4 RNA polymerase Rpb5, N-terminal domain containi... 89 3e-16
UniRef100_A4QW70 Putative uncharacterized protein n=1 Tax=Magnap... 89 3e-16
UniRef100_Q09191 DNA-directed RNA polymerases I, II, and III sub... 89 3e-16
UniRef100_UPI000180C3C9 PREDICTED: similar to 25-kDa subunit RNA... 88 4e-16
UniRef100_B0EA74 DNA-directed RNA polymerases I, II, and III sub... 88 4e-16
UniRef100_C4LW54 RNA polymerase subunit Rpb5, putative n=1 Tax=E... 88 5e-16
UniRef100_B3S3Q9 Putative uncharacterized protein n=1 Tax=Tricho... 88 5e-16
UniRef100_Q7S8Z5 DNA-directed RNA polymerases II 24 kDa polypept... 88 5e-16
UniRef100_UPI00004E3EE0 RNA polymerase II core subunit n=1 Tax=D... 87 7e-16
UniRef100_Q2H038 Putative uncharacterized protein n=1 Tax=Chaeto... 87 7e-16
UniRef100_Q54EH2 DNA-directed RNA polymerases I, II, and III sub... 87 7e-16
UniRef100_A6N9W6 25-kDa subunit RNA polymerase n=1 Tax=Ornithodo... 87 9e-16
UniRef100_Q0D0C1 DNA-directed RNA polymerases II 24 kDa polypept... 87 9e-16
UniRef100_C7Z7I7 Predicted protein n=1 Tax=Nectria haematococca ... 87 1e-15
UniRef100_B2VUN9 DNA-directed RNA polymerases I n=1 Tax=Pyrenoph... 86 2e-15
UniRef100_A3GI06 DNA-directed RNA polymerases II 24 kDa polypept... 86 2e-15
UniRef100_UPI000186E78B DNA-directed RNA polymerase II 23 kDa po... 86 2e-15
UniRef100_UPI000056951D UPI000056951D related cluster n=1 Tax=Da... 86 2e-15
UniRef100_C1C3Q7 DNA-directed RNA polymerases I, II, and III sub... 86 2e-15
UniRef100_C1BIS3 DNA-directed RNA polymerase II 23 kDa polypepti... 86 2e-15
UniRef100_B5X957 DNA-directed RNA polymerases I, II, and III sub... 86 2e-15
UniRef100_C4WY48 ACYPI000388 protein n=1 Tax=Acyrthosiphon pisum... 86 2e-15
UniRef100_A0BL34 Chromosome undetermined scaffold_113, whole gen... 86 2e-15
UniRef100_B2AZ24 Predicted CDS Pa_3_3870 n=1 Tax=Podospora anser... 86 2e-15
UniRef100_A5DHL4 DNA-directed RNA polymerases II 24 kDa polypept... 86 2e-15
UniRef100_Q6DEG5 Polymerase (RNA) II (DNA directed) polypeptide ... 86 3e-15
UniRef100_Q4S3C9 Chromosome 1 SCAF14751, whole genome shotgun se... 86 3e-15
UniRef100_C3ZQF0 Putative uncharacterized protein n=1 Tax=Branch... 86 3e-15
UniRef100_C4Y929 DNA-directed RNA polymerases II 24 kDa polypept... 86 3e-15
UniRef100_A2QAL5 Catalytic activity: Nucleoside triphosphate + R... 86 3e-15
UniRef100_Q80UW8 DNA-directed RNA polymerases I, II, and III sub... 86 3e-15
UniRef100_UPI0000E24E5A PREDICTED: similar to Polymerase (RNA) I... 85 3e-15
UniRef100_B5FX59 Putative DNA directed RNA polymerase II polypep... 85 3e-15
UniRef100_Q28HF5 Polymerase (RNA) II (DNA directed) polypeptide ... 85 3e-15
UniRef100_A7RT72 Predicted protein n=1 Tax=Nematostella vectensi... 85 3e-15
UniRef100_A0BLZ0 Chromosome undetermined scaffold_115, whole gen... 85 3e-15
UniRef100_C5DNB3 KLTH0G15598p n=1 Tax=Lachancea thermotolerans C... 85 3e-15
UniRef100_B6HAG0 Pc16g12690 protein n=1 Tax=Penicillium chrysoge... 85 3e-15
UniRef100_A7TEH4 Putative uncharacterized protein n=1 Tax=Vander... 85 3e-15
UniRef100_Q5R587 DNA-directed RNA polymerases I, II, and III sub... 85 3e-15
UniRef100_P19388 DNA-directed RNA polymerases I, II, and III sub... 85 3e-15
UniRef100_Q2T9T3 DNA-directed RNA polymerases I, II, and III sub... 85 3e-15
UniRef100_UPI000023E584 hypothetical protein FG09748.1 n=1 Tax=G... 85 4e-15
UniRef100_C8VQY1 RNA polymerase subunit (AFU_orthologue; AFUA_1G... 85 4e-15
UniRef100_C5G7M7 DNA-directed RNA polymerase II polypeptide n=2 ... 85 4e-15
UniRef100_C4VBP1 Putative uncharacterized protein n=1 Tax=Nosema... 85 4e-15
UniRef100_B8N6W2 RNA polymerase subunit n=1 Tax=Aspergillus flav... 85 4e-15
UniRef100_B6QBA8 RNA polymerase subunit n=1 Tax=Penicillium marn... 85 4e-15
UniRef100_B6QBA7 RNA polymerase subunit n=1 Tax=Penicillium marn... 85 4e-15
UniRef100_UPI0000587A08 PREDICTED: similar to RPB5 n=1 Tax=Stron... 84 6e-15
UniRef100_B4DJ89 cDNA FLJ55074, highly similar to DNA-directed R... 84 6e-15
UniRef100_C1GUJ0 DNA-directed RNA polymerases I n=1 Tax=Paracocc... 84 6e-15
UniRef100_C1FYH2 DNA-directed RNA polymerases I n=1 Tax=Paracocc... 84 6e-15
UniRef100_C0S407 DNA-directed RNA polymerases I n=1 Tax=Paracocc... 84 6e-15
UniRef100_C0NL28 RNA polymerase subunit n=2 Tax=Ajellomyces caps... 84 6e-15
UniRef100_A6R8U3 DNA-directed RNA polymerases II 24 kDa polypept... 84 6e-15
UniRef100_B5DLP1 GA22581 n=1 Tax=Drosophila pseudoobscura pseudo... 84 7e-15
UniRef100_UPI00015B5456 PREDICTED: similar to ENSANGP00000006082... 84 1e-14
UniRef100_C3KI95 DNA-directed RNA polymerases I, II, and III sub... 84 1e-14
UniRef100_C1BZT4 DNA-directed RNA polymerases I, II, and III sub... 84 1e-14
UniRef100_B5X8S7 DNA-directed RNA polymerases I, II, and III sub... 84 1e-14
UniRef100_C5FC74 DNA-directed RNA polymerase II polypeptide n=1 ... 83 1e-14
UniRef100_P20434 DNA-directed RNA polymerases I, II, and III sub... 83 1e-14
UniRef100_A2DEU9 RNA polymerase Rpb5, C-terminal domain containi... 83 2e-14
UniRef100_C5DR69 ZYRO0B06006p n=1 Tax=Zygosaccharomyces rouxii C... 83 2e-14
UniRef100_B8M3B9 RNA polymerase subunit n=1 Tax=Talaromyces stip... 83 2e-14
UniRef100_Q6BIJ0 DNA-directed RNA polymerases I, II, and III sub... 83 2e-14
UniRef100_Q6FQA6 DNA-directed RNA polymerases I, II, and III sub... 83 2e-14
UniRef100_UPI00003C0CAC PREDICTED: similar to Rpb5 CG11979-PA n=... 82 2e-14
UniRef100_Q24FV0 RNA polymerase Rpb5, C-terminal domain containi... 82 2e-14
UniRef100_C9S900 DNA-directed RNA polymerases I n=1 Tax=Verticil... 82 2e-14
UniRef100_Q9LUR5 RNA polymerase-like protein n=1 Tax=Arabidopsis... 82 4e-14
UniRef100_Q0UZB4 Putative uncharacterized protein n=1 Tax=Phaeos... 81 5e-14
UniRef100_Q7RKX0 RNA polymerase Rpb5, C-terminal domain, putativ... 81 6e-14
UniRef100_B3MEP0 GF12445 n=1 Tax=Drosophila ananassae RepID=B3ME... 81 6e-14
UniRef100_Q9P4B9 DNA-directed RNA polymerases I, II, and III sub... 81 6e-14
UniRef100_UPI0000D56A05 PREDICTED: similar to AGAP010064-PA n=1 ... 80 8e-14
UniRef100_B5DLL1 GA22602 n=2 Tax=pseudoobscura subgroup RepID=B5... 80 8e-14
UniRef100_Q7JZF5 Rpb5 n=5 Tax=melanogaster subgroup RepID=Q7JZF5... 80 8e-14
UniRef100_A9UR01 Predicted protein n=1 Tax=Monosiga brevicollis ... 80 8e-14
UniRef100_B4MK71 GK20665 n=1 Tax=Drosophila willistoni RepID=B4M... 80 1e-13
UniRef100_B4KPZ3 GI19761 n=2 Tax=Drosophila RepID=B4KPZ3_DROMO 80 1e-13
UniRef100_B4J892 GH20567 n=1 Tax=Drosophila grimshawi RepID=B4J8... 80 1e-13
UniRef100_C5PAC2 DNA-directed RNA polymerase subunit, putative n... 80 1e-13
UniRef100_Q4YN14 Putative uncharacterized protein n=1 Tax=Plasmo... 80 1e-13
UniRef100_B0X7A5 DNA-directed RNA polymerase II 23 kDa polypepti... 79 2e-13
UniRef100_Q6CJ62 DNA-directed RNA polymerases I, II, and III sub... 79 2e-13
UniRef100_C4JYC4 DNA-directed RNA polymerases II 24 kDa polypept... 79 2e-13
UniRef100_Q8T1Q5 DNA-directed RNA polymerases II, putative n=1 T... 79 3e-13
UniRef100_A4H9I9 DNA-directed RNA polymerases II, putative n=1 T... 79 3e-13
UniRef100_A9USL7 Predicted protein n=1 Tax=Monosiga brevicollis ... 78 4e-13
UniRef100_Q4QDW4 DNA-directed RNA polymerases II, putative n=1 T... 78 5e-13
UniRef100_A4HXV2 DNA-directed RNA polymerases II, putative n=1 T... 78 5e-13
UniRef100_Q388R5 DNA-directed RNA polymerases II subunit, putati... 77 9e-13
UniRef100_C9ZZV1 DNA-directed RNA polymerases II subunit, putati... 77 9e-13
UniRef100_A7ECH0 Putative uncharacterized protein n=1 Tax=Sclero... 77 1e-12
UniRef100_A6SPK6 Putative uncharacterized protein n=1 Tax=Botryo... 76 2e-12
UniRef100_A7QJL5 Chromosome chr8 scaffold_106, whole genome shot... 75 3e-12
UniRef100_B4GBQ3 GL10501 n=1 Tax=Drosophila persimilis RepID=B4G... 74 6e-12
UniRef100_Q3LW39 RNA polymerase I, II and III n=1 Tax=Bigelowiel... 74 8e-12
UniRef100_B5E0K0 GA24393 n=1 Tax=Drosophila pseudoobscura pseudo... 74 8e-12
UniRef100_A9SWJ6 Predicted protein n=1 Tax=Physcomitrella patens... 73 2e-11
UniRef100_Q8SRJ3 DNA-DIRECTED RNA POLYMERASE I n=1 Tax=Encephali... 73 2e-11
UniRef100_A9CSN6 DNA-directed RNA polymerase, subunit H, RpoH-RP... 73 2e-11
UniRef100_UPI00005A3E0E PREDICTED: similar to DNA directed RNA p... 72 3e-11
UniRef100_UPI0000EB19D6 DNA-directed RNA polymerases I, II, and ... 72 4e-11
UniRef100_UPI0000D9E960 PREDICTED: similar to DNA directed RNA p... 70 9e-11
UniRef100_A8BWP9 RNA polymerase II subunit Rpb5a n=2 Tax=Giardia... 70 9e-11
UniRef100_C6LZS6 RNA polymerase II subunit Rpb5a n=1 Tax=Giardia... 69 2e-10
UniRef100_C5LN15 DNA-directed RNA polymerases II 24 kDa polypept... 66 2e-09
UniRef100_C6LZX1 RNA polymerase II subunit Rpb5b n=1 Tax=Giardia... 64 1e-08
UniRef100_B6SJT2 DNA-directed RNA polymerase II 23 kDa polypepti... 63 1e-08
UniRef100_C9RDL1 RNA polymerase Rpb5 n=1 Tax=Methanocaldococcus ... 61 5e-08
UniRef100_A8B5W9 RNA polymerase II subunit Rpb5b n=2 Tax=Giardia... 60 2e-07
UniRef100_UPI0001925DCF PREDICTED: similar to polymerase (RNA) I... 59 3e-07
UniRef100_O27122 DNA-directed RNA polymerase subunit H n=1 Tax=M... 59 3e-07
UniRef100_B7EQI7 cDNA clone:J023098I05, full insert sequence n=1... 58 6e-07
UniRef100_Q4QDW3 DNA-directed RNA polymerase II, putative n=1 Ta... 58 6e-07
UniRef100_A4HXV3 DNA-directed RNA polymerase II, putative n=1 Ta... 58 6e-07
UniRef100_UPI000155C2F2 PREDICTED: similar to polymerase (RNA) I... 57 1e-06
UniRef100_A9NTD1 Putative uncharacterized protein n=1 Tax=Picea ... 57 1e-06
UniRef100_Q91F72 Putative DNA-directed RNA polymerase subunit 45... 57 1e-06
UniRef100_C7P938 RNA polymerase Rpb5 n=1 Tax=Methanocaldococcus ... 55 3e-06
UniRef100_C5U6G3 RNA polymerase Rpb5 n=1 Tax=Methanocaldococcus ... 55 3e-06
UniRef100_Q58443 DNA-directed RNA polymerase subunit H n=1 Tax=M... 55 3e-06
UniRef100_A4H9J0 DNA-directed RNA polymerase II, putative n=1 Ta... 55 4e-06
UniRef100_O74019 DNA-directed RNA polymerase subunit H n=1 Tax=P... 55 4e-06
UniRef100_Q9V116 DNA-directed RNA polymerase subunit H n=1 Tax=P... 55 5e-06