[UP]
BLASTX 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BB917617 RCE23234
(574 letters)
Database: uniref100
9,526,577 sequences; 3,332,566,763 total letters
Searching..................................................done
significant alignments:[graphical|details]
UniRef100_P46279 DNA-directed RNA polymerase II subunit RPB7 n=2... 306 1e-81
UniRef100_B7FHG8 Putative uncharacterized protein n=1 Tax=Medica... 304 4e-81
UniRef100_B9S3C9 DNA-directed RNA polymerase II 19 kD polypeptid... 301 2e-80
UniRef100_B9GGV6 Predicted protein n=1 Tax=Populus trichocarpa R... 300 4e-80
UniRef100_A5C1N5 Chromosome chr6 scaffold_3, whole genome shotgu... 298 2e-79
UniRef100_P38421 DNA-directed RNA polymerase II subunit RPB7 n=2... 290 7e-77
UniRef100_Q6ATY6 Os05g0400700 protein n=2 Tax=Oryza sativa RepID... 288 2e-76
UniRef100_B4G147 DNA-directed RNA polymerase II 19 kDa polypepti... 287 5e-76
UniRef100_A9TN64 Predicted protein n=1 Tax=Physcomitrella patens... 270 8e-71
UniRef100_Q0PEU5 RNA polymerase II (Fragment) n=1 Tax=Sorbus auc... 216 8e-55
UniRef100_UPI00006A4A38 PREDICTED: similar to DNA directed RNA p... 188 3e-46
UniRef100_UPI000155F572 PREDICTED: similar to DNA directed RNA p... 187 4e-46
UniRef100_C3ZQZ0 Putative uncharacterized protein n=1 Tax=Branch... 187 5e-46
UniRef100_B5XFX6 DNA-directed RNA polymerase II subunit RPB7 n=3... 186 8e-46
UniRef100_Q7ZW41 DNA-directed RNA polymerase II subunit RPB7 n=3... 186 1e-45
UniRef100_P62487 DNA-directed RNA polymerase II subunit RPB7 n=4... 186 1e-45
UniRef100_C3KIZ3 DNA-directed RNA polymerase II subunit RPB7 n=1... 185 2e-45
UniRef100_C3KJA5 DNA-directed RNA polymerase II subunit RPB7 n=1... 185 2e-45
UniRef100_UPI0001923EB2 PREDICTED: similar to DNA directed RNA p... 184 3e-45
UniRef100_A7SAY0 Predicted protein n=1 Tax=Nematostella vectensi... 184 3e-45
UniRef100_C3KGS2 DNA-directed RNA polymerase II subunit RPB7 n=1... 184 4e-45
UniRef100_B5X965 DNA-directed RNA polymerase II subunit RPB7 n=1... 183 7e-45
UniRef100_UPI0000584A92 PREDICTED: similar to Polymerase (RNA) I... 183 9e-45
UniRef100_Q3ZBW0 Polymerase (RNA) II (DNA directed) polypeptide ... 182 2e-44
UniRef100_B7TJ05 DNA-directed RNA polymerase II polypeptide G n=... 182 2e-44
UniRef100_UPI00018ACFE3 RNA polymerase II subunit 7 n=1 Tax=Naso... 182 2e-44
UniRef100_C1C4A3 DNA-directed RNA polymerase II subunit RPB7 n=1... 181 3e-44
UniRef100_C1BND7 DNA-directed RNA polymerase II subunit RPB7 n=1... 181 3e-44
UniRef100_UPI0000221703 Hypothetical protein CBG04195 n=1 Tax=Ca... 181 5e-44
UniRef100_B0W2B6 DNA-directed RNA polymerase II 19 kDa polypepti... 179 1e-43
UniRef100_C1DYL5 Predicted protein n=1 Tax=Micromonas sp. RCC299... 178 2e-43
UniRef100_A8WWE2 C. briggsae CBR-RPB-7 protein n=1 Tax=Caenorhab... 178 2e-43
UniRef100_Q17FM2 DNA-directed RNA polymerase II 19 kDa polypepti... 178 3e-43
UniRef100_Q9VFB5 Rpb7 n=3 Tax=melanogaster subgroup RepID=Q9VFB5... 177 4e-43
UniRef100_UPI0000E22AEB PREDICTED: similar to RNA polymerase II ... 177 5e-43
UniRef100_UPI00006DFCE0 PREDICTED: similar to polymerase (RNA) I... 177 5e-43
UniRef100_UPI00006A0899 UPI00006A0899 related cluster n=1 Tax=Xe... 177 5e-43
UniRef100_UPI0000EB18F9 DNA-directed RNA polymerase II subunit R... 177 5e-43
UniRef100_Q9N3C9 Putative uncharacterized protein n=1 Tax=Caenor... 177 5e-43
UniRef100_B4PS78 GE26402 n=6 Tax=Sophophora RepID=B4PS78_DROYA 177 5e-43
UniRef100_C4WX48 ACYPI003367 protein n=1 Tax=Acyrthosiphon pisum... 176 9e-43
UniRef100_UPI000051A7BC PREDICTED: similar to Rpb7 CG31155-PA, p... 176 1e-42
UniRef100_B4JGB3 GH18755 n=3 Tax=Drosophila RepID=B4JGB3_DROGR 176 1e-42
UniRef100_A4S3R6 Predicted protein n=1 Tax=Ostreococcus lucimari... 175 3e-42
UniRef100_UPI000186CD1A mixed-lineage leukemia protein, mll, put... 174 4e-42
UniRef100_UPI0000D560AA PREDICTED: similar to GA16051-PA n=1 Tax... 174 6e-42
UniRef100_A8QBL6 Polymerase, putative n=1 Tax=Brugia malayi RepI... 172 1e-41
UniRef100_Q7PYV3 AGAP002121-PA n=1 Tax=Anopheles gambiae RepID=Q... 171 3e-41
UniRef100_B3S0W7 Putative uncharacterized protein n=1 Tax=Tricho... 169 1e-40
UniRef100_A8ISK2 DNA-directed RNA polymerase II, 19 kDa polypept... 169 2e-40
UniRef100_Q00ZY7 DNA-directed RNA polymerase subunit E' (ISS) n=... 167 5e-40
UniRef100_Q54P04 DNA-directed RNA polymerase II subunit rpb7 n=1... 167 5e-40
UniRef100_UPI000194E41D PREDICTED: similar to polymerase (RNA) I... 160 5e-38
UniRef100_Q5DB36 SJCHGC02592 protein n=1 Tax=Schistosoma japonic... 160 6e-38
UniRef100_C1MQF2 Predicted protein n=1 Tax=Micromonas pusilla CC... 159 2e-37
UniRef100_A5DHT0 Putative uncharacterized protein n=1 Tax=Pichia... 157 5e-37
UniRef100_UPI000151B414 hypothetical protein PGUG_02831 n=1 Tax=... 155 2e-36
UniRef100_A3GFG7 RNA polymerase II subunit n=1 Tax=Pichia stipit... 155 2e-36
UniRef100_B7PE24 DNA-directed RNA polymerase subunit E', putativ... 155 3e-36
UniRef100_Q6BIU6 DEHA2G07546p n=1 Tax=Debaryomyces hansenii RepI... 155 3e-36
UniRef100_B6JXX4 DNA-directed RNA polymerase II subunit RPB7 n=1... 154 4e-36
UniRef100_C4YFA6 DNA-directed RNA polymerase II 19 kDa polypepti... 153 8e-36
UniRef100_Q5DBG3 Putative uncharacterized protein n=1 Tax=Schist... 153 1e-35
UniRef100_Q5A8Y7 Likely RNA Pol II core complex subunit n=2 Tax=... 153 1e-35
UniRef100_A5DVP2 DNA-directed RNA polymerase II 19 kDa polypepti... 152 2e-35
UniRef100_O14459 DNA-directed RNA polymerase II subunit rpb7 n=1... 152 2e-35
UniRef100_C5MEG1 DNA-directed RNA polymerase II 19 kDa polypepti... 152 2e-35
UniRef100_C4Q0F7 DNA-directed rna polymerase II 19 kD polypeptid... 150 5e-35
UniRef100_B0DKE6 Predicted protein n=1 Tax=Laccaria bicolor S238... 150 9e-35
UniRef100_A8N5F1 Putative uncharacterized protein n=1 Tax=Coprin... 149 2e-34
UniRef100_A7ER17 Putative uncharacterized protein n=1 Tax=Sclero... 148 3e-34
UniRef100_A6SL82 Putative uncharacterized protein n=1 Tax=Botryo... 148 3e-34
UniRef100_B8P5T6 Predicted protein n=1 Tax=Postia placenta Mad-6... 148 3e-34
UniRef100_Q4P3H9 Putative uncharacterized protein n=1 Tax=Ustila... 146 1e-33
UniRef100_Q2HAA7 Putative uncharacterized protein n=1 Tax=Chaeto... 146 1e-33
UniRef100_Q5KHZ6 Putative uncharacterized protein n=1 Tax=Filoba... 145 3e-33
UniRef100_Q6MV30 Probable DNA-directed RNA polymerase II chain R... 141 3e-32
UniRef100_B2ATR6 Predicted CDS Pa_1_16720 n=1 Tax=Podospora anse... 140 9e-32
UniRef100_C9SIH0 DNA-directed RNA polymerase II subunit RPB7 n=1... 139 2e-31
UniRef100_B5FVE7 YALI0D11627p n=1 Tax=Yarrowia lipolytica RepID=... 135 2e-30
UniRef100_Q55UE9 Putative uncharacterized protein n=1 Tax=Filoba... 134 4e-30
UniRef100_C4R9A1 RNA polymerase II subunit n=1 Tax=Pichia pastor... 134 5e-30
UniRef100_UPI000023E344 hypothetical protein FG01220.1 n=1 Tax=G... 133 8e-30
UniRef100_Q753Q2 AFR402Cp n=1 Tax=Eremothecium gossypii RepID=Q7... 129 2e-28
UniRef100_A8Q628 Putative uncharacterized protein n=1 Tax=Malass... 129 2e-28
UniRef100_Q6CU89 KLLA0C06787p n=1 Tax=Kluyveromyces lactis RepID... 129 2e-28
UniRef100_C5DLR8 KLTH0G02926p n=1 Tax=Lachancea thermotolerans C... 128 3e-28
UniRef100_C5GU02 RNA polymerase II subunit 7 n=1 Tax=Ajellomyces... 127 8e-28
UniRef100_C1H1N2 DNA-directed RNA polymerase II subunit RPB7 n=1... 127 8e-28
UniRef100_C1G5V3 RNA polymerase II subunit 7 n=1 Tax=Paracoccidi... 127 8e-28
UniRef100_C0RXK4 RNA polymerase II subunit 7 n=1 Tax=Paracoccidi... 127 8e-28
UniRef100_C0NG73 RNA polymerase II subunit 7 n=3 Tax=Ajellomyces... 127 8e-28
UniRef100_C5FWU0 DNA-directed RNA polymerase II subunit RPB7 n=1... 125 3e-27
UniRef100_Q1DZF6 Putative uncharacterized protein n=1 Tax=Coccid... 124 5e-27
UniRef100_C5P090 DNA-directed RNA polymerase II, putative n=1 Ta... 124 5e-27
UniRef100_C5JP31 RNA polymerase II subunit 7 n=1 Tax=Ajellomyces... 124 7e-27
UniRef100_C4Y643 Putative uncharacterized protein n=1 Tax=Clavis... 122 1e-26
UniRef100_A9BK44 Rpb7 n=1 Tax=Cryptophyta RepID=A9BK44_9CRYP 119 1e-25
UniRef100_A7AQQ9 DNA-directed RNA polymerase II, putative n=1 Ta... 119 2e-25
UniRef100_A1DBD6 RNA polymerase II subunit 7 n=1 Tax=Neosartorya... 118 3e-25
UniRef100_A1C471 RNA polymerase II subunit 7 n=1 Tax=Aspergillus... 118 3e-25
UniRef100_P34087 DNA-directed RNA polymerase II subunit RPB7 n=5... 118 3e-25
UniRef100_C5DW41 ZYRO0D11726p n=1 Tax=Zygosaccharomyces rouxii C... 118 4e-25
UniRef100_A2R8K1 Complex: in S. pombe the DNA-dependent RNA-poly... 117 5e-25
UniRef100_Q6FUK8 Strain CBS138 chromosome F complete sequence n=... 117 6e-25
UniRef100_Q8IJC9 DNA-directed RNA polymerase II, putative n=1 Ta... 117 8e-25
UniRef100_Q4N989 DNA-directed RNA polymerase II subunit Rpb7, pu... 117 8e-25
UniRef100_B8MQK6 RNA polymerase II subunit 7 n=1 Tax=Talaromyces... 117 8e-25
UniRef100_B9PI55 DNA-directed RNA polymerase II 19 kDa polypepti... 116 1e-24
UniRef100_B6KD73 DNA-directed RNA polymerase II subunit RPB7, pu... 116 1e-24
UniRef100_Q0CNG9 DNA-directed RNA polymerase II 19 kDa polypepti... 116 1e-24
UniRef100_C8VMQ5 RNA polymerase II subunit 7 (AFU_orthologue; AF... 116 1e-24
UniRef100_B6QUL0 RNA polymerase II subunit 7 n=1 Tax=Penicillium... 115 2e-24
UniRef100_B6H0W8 Pc12g03390 protein n=1 Tax=Penicillium chrysoge... 115 2e-24
UniRef100_Q2US04 DNA-directed RNA polymerase subunit E' n=1 Tax=... 115 2e-24
UniRef100_B8MXT0 RNA polymerase II subunit 7 n=1 Tax=Aspergillus... 115 2e-24
UniRef100_Q4XDG5 DNA-directed RNA polymerase II, putative n=2 Ta... 115 3e-24
UniRef100_A7TTM8 Putative uncharacterized protein n=1 Tax=Vander... 115 3e-24
UniRef100_Q7SH68 DNA-directed RNA polymerase II 19 kDa polypepti... 114 4e-24
UniRef100_B2WC37 DNA-directed RNA polymerase II 19 kDa polypepti... 114 5e-24
UniRef100_B3L236 Dna-directed rna polymerase ii, putative n=1 Ta... 112 2e-23
UniRef100_A5KE18 DNA-directed RNA polymerase II, putative n=1 Ta... 111 3e-23
UniRef100_B8C460 19kDa subunit of RNA polymerase n=1 Tax=Thalass... 109 1e-22
UniRef100_A4RF02 Putative uncharacterized protein n=1 Tax=Magnap... 108 4e-22
UniRef100_A9RP65 Predicted protein n=1 Tax=Physcomitrella patens... 105 3e-21
UniRef100_Q7RCA7 RNA polymerase II subunit 7 n=1 Tax=Plasmodium ... 105 3e-21
UniRef100_B7FYY8 Predicted protein n=1 Tax=Phaeodactylum tricorn... 103 7e-21
UniRef100_Q0UVK5 Putative uncharacterized protein n=1 Tax=Phaeos... 102 2e-20
UniRef100_C4VAF6 Putative uncharacterized protein n=1 Tax=Nosema... 101 5e-20
UniRef100_A3FQ92 DNA-directed RNA polymerase II, putative n=1 Ta... 100 6e-20
UniRef100_A9USP9 Predicted protein n=1 Tax=Monosiga brevicollis ... 100 8e-20
UniRef100_B6AK20 DNA-directed RNA polymerase II subunit RPB7, pu... 99 2e-19
UniRef100_Q1WA80 DNA directed RNA polymerase II polypeptide G (F... 99 3e-19
UniRef100_C7YKB3 Predicted protein n=1 Tax=Nectria haematococca ... 97 7e-19
UniRef100_B0Y9T8 RNA polymerase II subunit 7 n=2 Tax=Aspergillus... 97 1e-18
UniRef100_Q8SRG5 DNA-DIRECTED RNA POLYMERASE II 19kDa SUBUNIT n=... 95 3e-18
UniRef100_C5KMQ5 DNA-directed RNA polymerase II, putative n=2 Ta... 92 2e-17
UniRef100_C6T5N3 Putative uncharacterized protein n=1 Tax=Glycin... 85 5e-15
UniRef100_B9S9D8 DNA-directed RNA polymerase II 19 kD polypeptid... 82 2e-14
UniRef100_C5Z0L3 Putative uncharacterized protein Sb09g004460 n=... 81 5e-14
UniRef100_Q75M02 Os05g0157100 protein n=2 Tax=Oryza sativa RepID... 80 9e-14
UniRef100_Q98S95 RNA polymerase II RPB7 subunit-like protein n=1... 79 2e-13
UniRef100_Q75KS7 Putative receptor kinase n=1 Tax=Oryza sativa J... 79 2e-13
UniRef100_B9FN64 Putative uncharacterized protein n=1 Tax=Oryza ... 79 2e-13
UniRef100_B8AZD0 Putative uncharacterized protein n=1 Tax=Oryza ... 79 2e-13
UniRef100_A7NX05 Chromosome chr5 scaffold_2, whole genome shotgu... 79 2e-13
UniRef100_B9HUM9 Predicted protein n=2 Tax=Populus trichocarpa R... 79 3e-13
UniRef100_A2F013 RNA polymerase Rpb7, N-terminal domain containi... 79 3e-13
UniRef100_B4FXC7 DNA-directed RNA polymerase II 19 kDa polypepti... 77 7e-13
UniRef100_C4JIV5 DNA-directed RNA polymerase II 19 kDa polypepti... 76 2e-12
UniRef100_B7FLW9 Putative uncharacterized protein n=1 Tax=Medica... 75 3e-12
UniRef100_B9HKE3 Predicted protein n=1 Tax=Populus trichocarpa R... 75 5e-12
UniRef100_Q0DJV3 Os05g0224700 protein n=1 Tax=Oryza sativa Japon... 74 6e-12
UniRef100_Q9LIK8 RNA polymerase II fifth largest subunit-like pr... 74 1e-11
UniRef100_Q8LE42 RNA polymerase II fifth largest subunit-like pr... 74 1e-11
UniRef100_O23322 RNA polymerase II fifth largest subunit like pr... 73 2e-11
UniRef100_A6QRA1 At4g14660 n=1 Tax=Arabidopsis thaliana RepID=A6... 73 2e-11
UniRef100_B9HUM8 Predicted protein n=1 Tax=Populus trichocarpa R... 69 2e-10
UniRef100_O29148 DNA-directed RNA polymerase, subunit E' (RpoE1)... 65 3e-09
UniRef100_A7I4V6 DNA-directed RNA polymerase n=1 Tax=Candidatus ... 64 1e-08
UniRef100_A3CXR5 DNA-directed RNA polymerase, subunit E' n=1 Tax... 64 1e-08
UniRef100_C8S8R3 DNA-directed RNA polymerase n=1 Tax=Ferroglobus... 63 1e-08
UniRef100_Q8I150 CG31155-PA (Fragment) n=1 Tax=Drosophila pseudo... 62 2e-08
UniRef100_Q12TT6 DNA-directed RNA polymerase subunit E' n=1 Tax=... 62 2e-08
UniRef100_D0AA03 RNA polymerase subunit, putative n=2 Tax=Trypan... 62 4e-08
UniRef100_A0B8S5 DNA-directed RNA polymerase, subunit E' n=1 Tax... 61 7e-08
UniRef100_UPI000150A069 RNA polymerase Rpb7, N-terminal domain c... 60 1e-07
UniRef100_B8GFC6 DNA-directed RNA polymerase n=1 Tax=Methanospha... 60 1e-07
UniRef100_A6UTP7 DNA-directed RNA polymerase n=1 Tax=Methanococc... 60 1e-07
UniRef100_A8TGB5 DNA-directed RNA polymerase n=1 Tax=Methanococc... 60 2e-07
UniRef100_A2SR75 DNA-directed RNA polymerase, subunit E' n=1 Tax... 59 2e-07
UniRef100_C9RIC2 DNA-directed RNA polymerase n=1 Tax=Methanocald... 59 2e-07
UniRef100_Q57840 DNA-directed RNA polymerase subunit E' n=1 Tax=... 59 2e-07
UniRef100_Q8TJT5 DNA-directed RNA polymerase, subunit E n=1 Tax=... 59 3e-07
UniRef100_Q8PZ98 DNA-directed RNA polymerase subunit E' n=1 Tax=... 59 3e-07
UniRef100_Q4Q5F4 RNA polymerase-like protein, putative n=1 Tax=L... 59 3e-07
UniRef100_Q8ZSV9 DNA-directed RNA polymerase subunit E' (RpoE1) ... 58 5e-07
UniRef100_Q0W373 DNA-directed RNA polymerase, subunit E n=1 Tax=... 58 5e-07
UniRef100_A4HKB6 RNA polymerase-like protein, putative n=1 Tax=L... 58 6e-07
UniRef100_C5U6S4 DNA-directed RNA polymerase n=1 Tax=Methanocald... 58 6e-07
UniRef100_A4I7U5 RNA polymerase-like protein, putative n=1 Tax=L... 57 1e-06
UniRef100_Q46FS3 DNA-directed RNA polymerase, subunit E' n=1 Tax... 57 1e-06
UniRef100_A8QFZ7 RNA polymerase Rpb7, N-terminal domain containi... 57 1e-06
UniRef100_A4WN10 DNA-directed RNA polymerase, subunit E' n=1 Tax... 57 1e-06
UniRef100_A1RT16 DNA-directed RNA polymerase, subunit E' n=1 Tax... 57 1e-06
UniRef100_B6K0P2 RNA polymerase III subunit Rpc25 n=1 Tax=Schizo... 56 2e-06
UniRef100_C1E0N5 Predicted protein n=1 Tax=Micromonas sp. RCC299... 56 2e-06
UniRef100_A8PDR7 Putative uncharacterized protein n=1 Tax=Coprin... 56 2e-06
UniRef100_A8A8L6 DNA-directed RNA polymerase, subunit E' n=1 Tax... 56 2e-06
UniRef100_C7P808 DNA-directed RNA polymerase n=1 Tax=Methanocald... 56 2e-06
UniRef100_Q8TVE1 DNA-directed RNA polymerase subunit E' n=1 Tax=... 55 5e-06
UniRef100_Q2FTM9 DNA-directed RNA polymerase, subunit E' n=1 Tax... 55 5e-06
UniRef100_Q4SXE9 Chromosome undetermined SCAF12429, whole genome... 54 7e-06
UniRef100_A6VJ74 DNA-directed RNA polymerase n=1 Tax=Methanococc... 54 9e-06
UniRef100_A3MXN8 DNA-directed RNA polymerase, subunit E' n=1 Tax... 54 9e-06