BB917617 ( RCE23234 )

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[1][TOP]
>UniRef100_P46279 DNA-directed RNA polymerase II subunit RPB7 n=2 Tax=Glycine max
           RepID=RPB7_SOYBN
          Length = 176

 Score =  306 bits (783), Expect = 1e-81
 Identities = 150/150 (100%), Positives = 150/150 (100%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 150

[2][TOP]
>UniRef100_B7FHG8 Putative uncharacterized protein n=1 Tax=Medicago truncatula
           RepID=B7FHG8_MEDTR
          Length = 176

 Score =  304 bits (778), Expect = 4e-81
 Identities = 148/150 (98%), Positives = 150/150 (100%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKG+IR
Sbjct: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGIIR 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           +GDMPNYTTSDGSVKIQKDSEVRLKIIGTR
Sbjct: 121 TGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 150

[3][TOP]
>UniRef100_B9S3C9 DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative n=1
           Tax=Ricinus communis RepID=B9S3C9_RICCO
          Length = 176

 Score =  301 bits (772), Expect = 2e-80
 Identities = 146/150 (97%), Positives = 150/150 (100%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFFHIVLERNMQLHPRYFGRNLR+NLVSKLMKDVEGTCSGRHGFVVA+TGIE++GKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRYFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 150

[4][TOP]
>UniRef100_B9GGV6 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GGV6_POPTR
          Length = 176

 Score =  300 bits (769), Expect = 4e-80
 Identities = 145/150 (96%), Positives = 150/150 (100%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFFHIVLERNMQLHPR+FGRNLR+N+VSKLMKDVEGTCSGRHGFVVA+TGIENIGKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRFFGRNLRENIVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           +GDMPNYTTSDGSVKIQKDSEVRLKIIGTR
Sbjct: 121 TGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 150

[5][TOP]
>UniRef100_A5C1N5 Chromosome chr6 scaffold_3, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A5C1N5_VITVI
          Length = 176

 Score =  298 bits (764), Expect = 2e-79
 Identities = 144/150 (96%), Positives = 150/150 (100%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFFHIVLERNMQLHPR+FGR+LRDNLV+KL+KDVEGTCSGRHGFVVA+TGIEN+GKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRHFGRHLRDNLVAKLVKDVEGTCSGRHGFVVAITGIENVGKGLIR 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 150

[6][TOP]
>UniRef100_P38421 DNA-directed RNA polymerase II subunit RPB7 n=2 Tax=Arabidopsis
           thaliana RepID=RPB7_ARATH
          Length = 176

 Score =  290 bits (741), Expect = 7e-77
 Identities = 139/150 (92%), Positives = 147/150 (98%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFFHIVLERNMQLHPR+FGRNL++NLVSKLMKDVEGTCSGRHGFVVA+TGI+ IGKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRFFGRNLKENLVSKLMKDVEGTCSGRHGFVVAITGIDTIGKGLIR 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           DGTGFVTFPVKYQCVVFRPFKGEILEAVVT+VNKMGFFAEAGPVQIFVS HLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           +GDMPNYTTSDGSVKIQK+ EVRLKIIGTR
Sbjct: 121 AGDMPNYTTSDGSVKIQKECEVRLKIIGTR 150

[7][TOP]
>UniRef100_Q6ATY6 Os05g0400700 protein n=2 Tax=Oryza sativa RepID=Q6ATY6_ORYSJ
          Length = 177

 Score =  288 bits (737), Expect = 2e-76
 Identities = 138/150 (92%), Positives = 148/150 (98%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFFHIVLERNMQLHPR+FG +LRD LVSKL+KDVEGTCSGRHGFVVA+TG+E++GKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDVGKGLIR 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           +GTG+VTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           SGD+PNYTTSDGSVKIQKDSEVRLKIIGTR
Sbjct: 121 SGDVPNYTTSDGSVKIQKDSEVRLKIIGTR 150

[8][TOP]
>UniRef100_B4G147 DNA-directed RNA polymerase II 19 kDa polypeptide n=2
           Tax=Andropogoneae RepID=B4G147_MAIZE
          Length = 177

 Score =  287 bits (734), Expect = 5e-76
 Identities = 138/150 (92%), Positives = 148/150 (98%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFFHIVLERNMQLHPR+FG +LRD LVSKL+KDVEGTCSGRHGFVVA+TG+E+IGKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           +GTG+VTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           SGD+PNYTTSDGSVKIQK+SEVRLKIIGTR
Sbjct: 121 SGDVPNYTTSDGSVKIQKESEVRLKIIGTR 150

[9][TOP]
>UniRef100_A9TN64 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TN64_PHYPA
          Length = 177

 Score =  270 bits (689), Expect = 8e-71
 Identities = 128/150 (85%), Positives = 141/150 (94%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFFHI L+RN+QLHPR+FG +LRD L++KL++DVEGTCSGRHGFVVAVT +E IG GLIR
Sbjct: 1   MFFHIYLDRNLQLHPRHFGPHLRDKLIAKLIQDVEGTCSGRHGFVVAVTAVETIGSGLIR 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           DGTGFVTFPVKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDM FQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMAFQ 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           S D+PNY TSDGSV+IQKDSEVRLKI+GTR
Sbjct: 121 SDDVPNYKTSDGSVRIQKDSEVRLKIVGTR 150

[10][TOP]
>UniRef100_Q0PEU5 RNA polymerase II (Fragment) n=1 Tax=Sorbus aucuparia
           RepID=Q0PEU5_SORAU
          Length = 110

 Score =  216 bits (551), Expect = 8e-55
 Identities = 103/110 (93%), Positives = 110/110 (100%)
 Frame = +1

Query: 136 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTG 315
           IVLERNMQLHPR+FGRNLR+NLVSKLMKDVEGTCSG+HGFVVA+TGIENIGKG+IRDGTG
Sbjct: 1   IVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGQHGFVVAITGIENIGKGMIRDGTG 60

Query: 316 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIP 465
           FV+FP+KYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIP
Sbjct: 61  FVSFPMKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIP 110

[11][TOP]
>UniRef100_UPI00006A4A38 PREDICTED: similar to DNA directed RNA polymerase II polypeptide G
           n=1 Tax=Ciona intestinalis RepID=UPI00006A4A38
          Length = 172

 Score =  188 bits (477), Expect = 3e-46
 Identities = 88/151 (58%), Positives = 112/151 (74%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG NL + +  KL  +VEGTC+G+HGFV+AVT I+NIG GLI+
Sbjct: 1   MFYHISLEHEILLHPRYFGPNLLETVKQKLFTEVEGTCTGKHGFVIAVTTIDNIGDGLIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +P+KY+ +VFRPFKGE+++AVVT VNK+G F E GP+  F+S H IP DM+F 
Sbjct: 61  PGRGFVLYPIKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPADMKFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
                P Y T D  V IQ+D E+RLKI+GTR
Sbjct: 121 PESHPPCYKTDDEDVVIQQDDEIRLKIVGTR 151

[12][TOP]
>UniRef100_UPI000155F572 PREDICTED: similar to DNA directed RNA polymerase II polypeptide G
           n=1 Tax=Equus caballus RepID=UPI000155F572
          Length = 219

 Score =  187 bits (476), Expect = 4e-46
 Identities = 87/152 (57%), Positives = 115/152 (75%), Gaps = 1/152 (0%)
 Frame = +1

Query: 121 KMFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLI 300
           KMF+HI LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+NIG G+I
Sbjct: 47  KMFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVI 106

Query: 301 RDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 480
           + G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+  F+S H IP +MEF
Sbjct: 107 QPGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEF 166

Query: 481 Q-SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
             + + P Y T D  + IQ+D E+RLKI+GTR
Sbjct: 167 DPNSNPPCYKTMDEDIVIQQDDEIRLKIVGTR 198

[13][TOP]
>UniRef100_C3ZQZ0 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
           RepID=C3ZQZ0_BRAFL
          Length = 172

 Score =  187 bits (475), Expect = 5e-46
 Identities = 88/151 (58%), Positives = 114/151 (75%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+NIG G I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGVGAIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+  FVS H IP DMEF 
Sbjct: 61  PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEVGPMSCFVSRHSIPSDMEFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + + P Y T+D  V IQ+D E+R+KI+GTR
Sbjct: 121 PNSNPPCYKTADEDVVIQQDDEIRIKIVGTR 151

[14][TOP]
>UniRef100_B5XFX6 DNA-directed RNA polymerase II subunit RPB7 n=3 Tax=Euteleostei
           RepID=B5XFX6_SALSA
          Length = 172

 Score =  186 bits (473), Expect = 8e-46
 Identities = 86/151 (56%), Positives = 115/151 (76%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+  F+S H IP +MEF 
Sbjct: 61  PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + + P Y T+D  + IQ+D E+RLKI+GTR
Sbjct: 121 PNSNPPCYKTTDEDIVIQQDDEIRLKIVGTR 151

[15][TOP]
>UniRef100_Q7ZW41 DNA-directed RNA polymerase II subunit RPB7 n=3 Tax=Euteleostomi
           RepID=RPB7_DANRE
          Length = 172

 Score =  186 bits (471), Expect = 1e-45
 Identities = 87/151 (57%), Positives = 114/151 (75%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+  F+S H IP +MEF 
Sbjct: 61  PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + + P Y T D  V IQ+D E+RLKI+GTR
Sbjct: 121 PNSNPPCYKTVDEDVVIQQDDEIRLKIVGTR 151

[16][TOP]
>UniRef100_P62487 DNA-directed RNA polymerase II subunit RPB7 n=4 Tax=Eutheria
           RepID=RPB7_HUMAN
          Length = 172

 Score =  186 bits (471), Expect = 1e-45
 Identities = 86/151 (56%), Positives = 114/151 (75%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+  F+S H IP +MEF 
Sbjct: 61  PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + + P Y T D  + IQ+D E+RLKI+GTR
Sbjct: 121 PNSNPPCYKTMDEDIVIQQDDEIRLKIVGTR 151

[17][TOP]
>UniRef100_C3KIZ3 DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Anoplopoma
           fimbria RepID=C3KIZ3_9PERC
          Length = 172

 Score =  185 bits (470), Expect = 2e-45
 Identities = 86/151 (56%), Positives = 114/151 (75%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+  F+S H IP +MEF 
Sbjct: 61  PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + + P Y T D  + IQ+D E+RLKI+GTR
Sbjct: 121 PNSNPPCYKTVDEDIVIQQDDEIRLKIVGTR 151

[18][TOP]
>UniRef100_C3KJA5 DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Anoplopoma
           fimbria RepID=C3KJA5_9PERC
          Length = 172

 Score =  185 bits (469), Expect = 2e-45
 Identities = 86/151 (56%), Positives = 114/151 (75%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+  F+S H IP +MEF 
Sbjct: 61  PGGGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + + P Y T D  + IQ+D E+RLKI+GTR
Sbjct: 121 PNSNPPCYKTVDEDIVIQQDDEIRLKIVGTR 151

[19][TOP]
>UniRef100_UPI0001923EB2 PREDICTED: similar to DNA directed RNA polymerase II polypeptide G
           n=1 Tax=Hydra magnipapillata RepID=UPI0001923EB2
          Length = 172

 Score =  184 bits (468), Expect = 3e-45
 Identities = 88/151 (58%), Positives = 109/151 (72%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG NL   +  KL  +VEGTC+G++GFV+AVT I+NIG G I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPNLLQTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGYIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
              GFV +PVKY+ +VFRPFKGE+L+AVVT VNK G F E GP+  F+S H IP DMEF 
Sbjct: 61  PSRGFVVYPVKYKAIVFRPFKGEVLDAVVTQVNKAGLFTEVGPLSCFISRHSIPTDMEFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            +   P Y T D  V IQ+D E+RLKI+GTR
Sbjct: 121 PNSSPPCYKTHDEEVVIQQDDEIRLKIVGTR 151

[20][TOP]
>UniRef100_A7SAY0 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SAY0_NEMVE
          Length = 172

 Score =  184 bits (468), Expect = 3e-45
 Identities = 86/151 (56%), Positives = 111/151 (73%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG NL   +  KL  +VEGTCSG++GF++AVT I+NIG G I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPNLLQTVKQKLFTEVEGTCSGKYGFIIAVTTIDNIGVGHIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +PVKY+ +VFRPFKGE+L+AV+T VNK+G F E GP+  FVS H IP DMEF 
Sbjct: 61  PGRGFVVYPVKYKAIVFRPFKGEVLDAVITQVNKLGLFTEIGPLSCFVSRHSIPPDMEFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + + P Y T D  V  Q+D E+RL+++GTR
Sbjct: 121 PNSNPPCYKTKDEDVVYQQDDEIRLRVVGTR 151

[21][TOP]
>UniRef100_C3KGS2 DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Anoplopoma
           fimbria RepID=C3KGS2_9PERC
          Length = 172

 Score =  184 bits (467), Expect = 4e-45
 Identities = 86/151 (56%), Positives = 113/151 (74%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF HI LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1   MFHHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+  F+S H IP +MEF 
Sbjct: 61  PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEVGPMSCFISRHSIPSEMEFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + + P Y T D  + IQ+D E+RLKI+GTR
Sbjct: 121 PNSNPPCYKTVDEDIVIQQDDEIRLKIVGTR 151

[22][TOP]
>UniRef100_B5X965 DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Salmo salar
           RepID=B5X965_SALSA
          Length = 172

 Score =  183 bits (465), Expect = 7e-45
 Identities = 85/151 (56%), Positives = 114/151 (75%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E G +  F+S H IP +MEF 
Sbjct: 61  PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGSMSCFISRHSIPSEMEFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + + P Y T+D  + IQ+D E+RLKI+GTR
Sbjct: 121 PNSNPPCYKTTDEDIVIQQDDEIRLKIVGTR 151

[23][TOP]
>UniRef100_UPI0000584A92 PREDICTED: similar to Polymerase (RNA) II (DNA directed)
           polypeptide G-like n=1 Tax=Strongylocentrotus purpuratus
           RepID=UPI0000584A92
          Length = 172

 Score =  183 bits (464), Expect = 9e-45
 Identities = 84/151 (55%), Positives = 112/151 (74%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+H+ LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1   MFYHVSLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGMIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
              GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F + GP+  F+S H IP DMEF 
Sbjct: 61  PSRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTDIGPLSCFISRHSIPADMEFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            +   P Y T D  + IQ+D E+RLKI+GTR
Sbjct: 121 PNSSPPCYKTKDEDIVIQQDDEIRLKIVGTR 151

[24][TOP]
>UniRef100_Q3ZBW0 Polymerase (RNA) II (DNA directed) polypeptide G n=1 Tax=Bos taurus
           RepID=Q3ZBW0_BOVIN
          Length = 172

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/151 (56%), Positives = 113/151 (74%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG NL + +  KL  +VEGTC+G++ FV+AVT I+NIG G+I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYCFVIAVTTIDNIGAGVIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+  F+S H IP +MEF 
Sbjct: 61  PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + + P Y T D  + IQ+D E+RLKI+GTR
Sbjct: 121 PNSNPPCYKTMDEDIVIQQDDEIRLKIVGTR 151

[25][TOP]
>UniRef100_B7TJ05 DNA-directed RNA polymerase II polypeptide G n=1 Tax=Ovis aries
           RepID=B7TJ05_SHEEP
          Length = 172

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/151 (56%), Positives = 113/151 (74%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +PVK + +VFRPFKGE+++AVVT VNK+G F E GP+  F+S H IP +MEF 
Sbjct: 61  PGRGFVLYPVKSKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + + P Y T D  + IQ+D E+RLKI+GTR
Sbjct: 121 PNSNPPCYKTMDEDIVIQQDDEIRLKIVGTR 151

[26][TOP]
>UniRef100_UPI00018ACFE3 RNA polymerase II subunit 7 n=1 Tax=Nasonia vitripennis
           RepID=UPI00018ACFE3
          Length = 173

 Score =  182 bits (461), Expect = 2e-44
 Identities = 86/151 (56%), Positives = 112/151 (74%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG  L D +  KL  +VEG C+G++GFVVAVT I+NIG G+I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPQLLDTVKQKLYTEVEGNCTGKYGFVVAVTTIDNIGAGIIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF- 480
            G GFV +PVKY+ +VFRPFKGE+L+ +VT VNK+G FAE GP+  F+S+H IP DM+F 
Sbjct: 61  PGQGFVVYPVKYKAIVFRPFKGEVLDGIVTQVNKVGMFAEIGPLSCFISHHSIPADMQFC 120

Query: 481 QSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + + P Y + D  V IQ D E+RLKI+GTR
Sbjct: 121 PNVNPPCYKSKDEDVVIQADDEIRLKIVGTR 151

[27][TOP]
>UniRef100_C1C4A3 DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Rana
           catesbeiana RepID=C1C4A3_RANCA
          Length = 172

 Score =  181 bits (460), Expect = 3e-44
 Identities = 85/151 (56%), Positives = 113/151 (74%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +PVKY+ +VFRPFKGE+++AVV+ VNK+G F E GP+  F+S H IP +MEF 
Sbjct: 61  PGRGFVLYPVKYKAIVFRPFKGEVVDAVVSQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + + P Y T D  V IQ+  E+RLKI+GTR
Sbjct: 121 PNSNPPCYKTVDEDVVIQQGDEIRLKIVGTR 151

[28][TOP]
>UniRef100_C1BND7 DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Caligus
           rogercresseyi RepID=C1BND7_9MAXI
          Length = 172

 Score =  181 bits (460), Expect = 3e-44
 Identities = 84/151 (55%), Positives = 112/151 (74%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI L+  ++LHPRYFG  L D +  KL  +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1   MFYHICLDHEIRLHPRYFGPTLLDRVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGIIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +PVKY+ +VFRPFKGE+L+AVVT VNK+G F E GP   F+S H IP DM F 
Sbjct: 61  PGNGFVIYPVKYKAIVFRPFKGEVLDAVVTQVNKVGLFTEIGPPSCFISRHSIPADMTFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + + P Y T++  V I +D ++RLKI+GTR
Sbjct: 121 PNSNPPCYKTNNEEVTIHQDDDIRLKIVGTR 151

[29][TOP]
>UniRef100_UPI0000221703 Hypothetical protein CBG04195 n=1 Tax=Caenorhabditis briggsae AF16
           RepID=UPI0000221703
          Length = 197

 Score =  181 bits (458), Expect = 5e-44
 Identities = 80/154 (51%), Positives = 115/154 (74%), Gaps = 1/154 (0%)
 Frame = +1

Query: 115 NKKMFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKG 294
           +K MFFH+ L+  + LHP+YFG NL + + +KL  +VEGTC+G++GFV+AVT I+ IG G
Sbjct: 21  HKNMFFHLSLDHEVCLHPKYFGPNLNETIKAKLFNEVEGTCTGKYGFVIAVTTIDTIGHG 80

Query: 295 LIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDM 474
           LI+ G GFV +PV+Y+ +VFRPFKG++++ VVT VNK+G F + GP+  F+S H IP DM
Sbjct: 81  LIQPGRGFVIYPVRYKAIVFRPFKGQVVDGVVTQVNKVGIFCDIGPLSCFISRHCIPPDM 140

Query: 475 EFQ-SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           EF  + + P Y T+D +  I+ D E+R+K+IGTR
Sbjct: 141 EFDPNSEKPCYKTNDEATVIRNDDEIRVKLIGTR 174

[30][TOP]
>UniRef100_B0W2B6 DNA-directed RNA polymerase II 19 kDa polypeptide n=1 Tax=Culex
           quinquefasciatus RepID=B0W2B6_CULQU
          Length = 173

 Score =  179 bits (454), Expect = 1e-43
 Identities = 84/151 (55%), Positives = 114/151 (75%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG  L + +  KL  +VEGTC+G++GFV+AVT I++IG G+I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPQLIETVKQKLYTEVEGTCTGKYGFVIAVTTIDDIGSGVIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF- 480
            G GFV +PVKY+ +VFRPFKGE+L+AVVT VNK+G FAE GP+  F+S+H IP DM+F 
Sbjct: 61  PGQGFVVYPVKYKAIVFRPFKGEVLDAVVTQVNKVGMFAEIGPLSCFISHHSIPADMQFC 120

Query: 481 QSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            +G+ P Y + D  V I  + ++RLKI+GTR
Sbjct: 121 PNGNPPCYKSKDEDVVIALEDKIRLKIVGTR 151

[31][TOP]
>UniRef100_C1DYL5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1DYL5_9CHLO
          Length = 185

 Score =  178 bits (452), Expect = 2e-43
 Identities = 84/152 (55%), Positives = 116/152 (76%), Gaps = 2/152 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LERN+ L PR+FGRN+RD L+ +L  +VEG+C+G+HG++V VT   NI +G++ 
Sbjct: 1   MFWHIKLERNIVLEPRFFGRNMRDTLMQRLKHEVEGSCTGKHGYIVMVTDFTNISEGMVT 60

Query: 304 D-GTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 480
           D GT    F V++  + FRPFKG++L+AVVT VNK GFFAEAGP+ +FVSN LI DDM+F
Sbjct: 61  DDGTARAKFRVEFDAIAFRPFKGQVLDAVVTEVNKFGFFAEAGPMNLFVSNQLISDDMKF 120

Query: 481 QSGDMPN-YTTSDGSVKIQKDSEVRLKIIGTR 573
           +S D  N Y +SD SV +QK+ EVR++++G R
Sbjct: 121 ESIDNANRYVSSDKSVSVQKNGEVRVRVVGMR 152

[32][TOP]
>UniRef100_A8WWE2 C. briggsae CBR-RPB-7 protein n=1 Tax=Caenorhabditis briggsae
           RepID=A8WWE2_CAEBR
          Length = 174

 Score =  178 bits (452), Expect = 2e-43
 Identities = 79/151 (52%), Positives = 113/151 (74%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFFH+ L+  + LHP+YFG NL + + +KL  +VEGTC+G++GFV+AVT I+ IG GLI+
Sbjct: 1   MFFHLSLDHEVCLHPKYFGPNLNETIKAKLFNEVEGTCTGKYGFVIAVTTIDTIGHGLIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +PV+Y+ +VFRPFKG++++ VVT VNK+G F + GP+  F+S H IP DMEF 
Sbjct: 61  PGRGFVIYPVRYKAIVFRPFKGQVVDGVVTQVNKVGIFCDIGPLSCFISRHCIPPDMEFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + + P Y T+D +  I+ D E+R+K+IGTR
Sbjct: 121 PNSEKPCYKTNDEATVIRNDDEIRVKLIGTR 151

[33][TOP]
>UniRef100_Q17FM2 DNA-directed RNA polymerase II 19 kDa polypeptide rpb7 n=1
           Tax=Aedes aegypti RepID=Q17FM2_AEDAE
          Length = 173

 Score =  178 bits (451), Expect = 3e-43
 Identities = 84/151 (55%), Positives = 113/151 (74%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG  L + +  KL  +VEGTC+G++GFV+AVT I++IG GLI 
Sbjct: 1   MFYHISLEHEILLHPRYFGPQLIETVKQKLYTEVEGTCTGKYGFVIAVTTIDDIGSGLIL 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF- 480
            G GFV +PVKY+ +VFRPFKGE+L+AVVT VNK+G FA+ GP+  F+S+H IP DM+F 
Sbjct: 61  PGQGFVVYPVKYKAIVFRPFKGEVLDAVVTQVNKVGMFAQIGPLSCFISHHSIPADMQFC 120

Query: 481 QSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            +G+ P Y + D  V I  + ++RLKI+GTR
Sbjct: 121 PNGNPPCYKSQDEDVVIALEDKIRLKIVGTR 151

[34][TOP]
>UniRef100_Q9VFB5 Rpb7 n=3 Tax=melanogaster subgroup RepID=Q9VFB5_DROME
          Length = 173

 Score =  177 bits (450), Expect = 4e-43
 Identities = 82/151 (54%), Positives = 113/151 (74%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE+ + LHPRYFG  L + +  KL  +VEGTC+G++GFV+AVT I+ IG G+I+
Sbjct: 1   MFYHISLEQEILLHPRYFGPQLLETVKQKLYSEVEGTCTGKYGFVIAVTTIDQIGSGVIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF- 480
            G GFV +PVKY+ +VFRPFKGE+L+AVV  +NK+G FAE GP+  F+S+H IP DM+F 
Sbjct: 61  PGQGFVVYPVKYKAIVFRPFKGEVLDAVVKQINKVGMFAEIGPLSCFISHHSIPADMQFC 120

Query: 481 QSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            +G+ P Y + D  V I  + ++RLKI+GTR
Sbjct: 121 PNGNPPCYKSKDEDVVISGEDKIRLKIVGTR 151

[35][TOP]
>UniRef100_UPI0000E22AEB PREDICTED: similar to RNA polymerase II subunit hsRPB7 n=1 Tax=Pan
           troglodytes RepID=UPI0000E22AEB
          Length = 227

 Score =  177 bits (449), Expect = 5e-43
 Identities = 83/147 (56%), Positives = 110/147 (74%), Gaps = 1/147 (0%)
 Frame = +1

Query: 136 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTG 315
           I LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+NIG G+I+ G G
Sbjct: 60  ISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQPGRG 119

Query: 316 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-SGD 492
           FV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+  F+S H IP +MEF  + +
Sbjct: 120 FVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSN 179

Query: 493 MPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            P Y T D  + IQ+D E+RLKI+GTR
Sbjct: 180 PPCYKTMDEDIVIQQDDEIRLKIVGTR 206

[36][TOP]
>UniRef100_UPI00006DFCE0 PREDICTED: similar to polymerase (RNA) II (DNA directed)
           polypeptide G isoform 1 n=1 Tax=Macaca mulatta
           RepID=UPI00006DFCE0
          Length = 221

 Score =  177 bits (449), Expect = 5e-43
 Identities = 83/147 (56%), Positives = 110/147 (74%), Gaps = 1/147 (0%)
 Frame = +1

Query: 136 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTG 315
           I LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+NIG G+I+ G G
Sbjct: 54  ISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQPGRG 113

Query: 316 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-SGD 492
           FV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+  F+S H IP +MEF  + +
Sbjct: 114 FVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSN 173

Query: 493 MPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            P Y T D  + IQ+D E+RLKI+GTR
Sbjct: 174 PPCYKTMDEDIVIQQDDEIRLKIVGTR 200

[37][TOP]
>UniRef100_UPI00006A0899 UPI00006A0899 related cluster n=1 Tax=Xenopus (Silurana) tropicalis
           RepID=UPI00006A0899
          Length = 168

 Score =  177 bits (449), Expect = 5e-43
 Identities = 84/147 (57%), Positives = 110/147 (74%), Gaps = 1/147 (0%)
 Frame = +1

Query: 136 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTG 315
           I LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+NIG G+I+ G G
Sbjct: 1   ISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQPGRG 60

Query: 316 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-SGD 492
           FV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+  F+S H IP +MEF  + +
Sbjct: 61  FVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSN 120

Query: 493 MPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            P Y T D  V IQ+D E+RLKI+GTR
Sbjct: 121 PPCYKTVDEDVVIQQDDEIRLKIVGTR 147

[38][TOP]
>UniRef100_UPI0000EB18F9 DNA-directed RNA polymerase II subunit RPB7 (RNA polymerase II
           subunit B7) (DNA-directed RNA polymerase II subunit G)
           (DNA-directed RNA polymerase II 19 kDa polypeptide). n=1
           Tax=Canis lupus familiaris RepID=UPI0000EB18F9
          Length = 213

 Score =  177 bits (449), Expect = 5e-43
 Identities = 83/147 (56%), Positives = 110/147 (74%), Gaps = 1/147 (0%)
 Frame = +1

Query: 136 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTG 315
           I LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+NIG G+I+ G G
Sbjct: 46  ISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQPGRG 105

Query: 316 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-SGD 492
           FV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+  F+S H IP +MEF  + +
Sbjct: 106 FVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSN 165

Query: 493 MPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            P Y T D  + IQ+D E+RLKI+GTR
Sbjct: 166 PPCYKTMDEDIVIQQDDEIRLKIVGTR 192

[39][TOP]
>UniRef100_Q9N3C9 Putative uncharacterized protein n=1 Tax=Caenorhabditis elegans
           RepID=Q9N3C9_CAEEL
          Length = 197

 Score =  177 bits (449), Expect = 5e-43
 Identities = 79/152 (51%), Positives = 113/152 (74%), Gaps = 1/152 (0%)
 Frame = +1

Query: 121 KMFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLI 300
           +MFFH+ L+  + LHP+YFG NL + +  KL  +VEGTC+G++GFV+AVT I+ IG GLI
Sbjct: 23  RMFFHLSLDHEVCLHPKYFGPNLNETIKMKLFNEVEGTCTGKYGFVIAVTTIDTIGHGLI 82

Query: 301 RDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 480
           + G GFV +PV+Y+ +VFRPFKG++++ VVT VNK+G F + GP+  F+S H IP DMEF
Sbjct: 83  QPGRGFVIYPVRYKAIVFRPFKGQVVDGVVTQVNKVGIFCDIGPLSCFISRHCIPPDMEF 142

Query: 481 Q-SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
             + + P Y T+D +  I+ D E+R+K+IGTR
Sbjct: 143 DPNSEKPCYKTNDEANVIRNDDEIRVKLIGTR 174

[40][TOP]
>UniRef100_B4PS78 GE26402 n=6 Tax=Sophophora RepID=B4PS78_DROYA
          Length = 173

 Score =  177 bits (449), Expect = 5e-43
 Identities = 82/151 (54%), Positives = 112/151 (74%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG  L + +  KL  +VEGTC+G++GFV+AVT I+ IG G+I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPQLLETVKQKLYSEVEGTCTGKYGFVIAVTTIDQIGSGVIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF- 480
            G GFV +PVKY+ +VFRPFKGE+L+AVV  +NK+G FAE GP+  F+S+H IP DM+F 
Sbjct: 61  PGQGFVVYPVKYKAIVFRPFKGEVLDAVVKQINKVGMFAEIGPLSCFISHHSIPADMQFC 120

Query: 481 QSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            +G+ P Y + D  V I  + ++RLKI+GTR
Sbjct: 121 PNGNPPCYKSKDEDVVISGEDKIRLKIVGTR 151

[41][TOP]
>UniRef100_C4WX48 ACYPI003367 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WX48_ACYPI
          Length = 172

 Score =  176 bits (447), Expect = 9e-43
 Identities = 82/151 (54%), Positives = 113/151 (74%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE ++ LHPRYFG  L D +  KL ++VEGTC+G++GFV+AVT I+NIG GLI 
Sbjct: 1   MFYHIALEHDVLLHPRYFGPQLLDTVKQKLYREVEGTCTGKYGFVIAVTHIDNIGCGLIL 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF- 480
            G GFV + VKY+ +VFRPFKGE+LEAVVT +NK+G FAE GP+  F+S+H IP +++F 
Sbjct: 61  PGQGFVVYTVKYKAIVFRPFKGEVLEAVVTQLNKVGMFAEIGPLSCFISHHSIPSELQFC 120

Query: 481 QSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            +   P Y + + ++ IQ +  +RLKI+GTR
Sbjct: 121 PNTSPPCYKSKEENIAIQPEDTIRLKIVGTR 151

[42][TOP]
>UniRef100_UPI000051A7BC PREDICTED: similar to Rpb7 CG31155-PA, partial n=1 Tax=Apis
           mellifera RepID=UPI000051A7BC
          Length = 169

 Score =  176 bits (446), Expect = 1e-42
 Identities = 85/147 (57%), Positives = 110/147 (74%), Gaps = 1/147 (0%)
 Frame = +1

Query: 136 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTG 315
           I LE  + LHPRYFG  L D +  KL  +VEGTC+G++GFVVAVT I+NIG G+I+ G G
Sbjct: 1   ISLEHEILLHPRYFGPQLLDTVKQKLYTEVEGTCTGKYGFVVAVTTIDNIGAGIIQPGQG 60

Query: 316 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF-QSGD 492
           FV +PVKY+ +VFRPFKGE+L+A+VT VNK+G FAE GP+  F+S+H IP DM+F  + +
Sbjct: 61  FVVYPVKYKAIVFRPFKGEVLDAIVTQVNKVGMFAEIGPLSCFISHHSIPADMQFCPNIN 120

Query: 493 MPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            P Y T +  V IQ D E+RLKI+GTR
Sbjct: 121 PPCYKTKEEDVIIQPDDEIRLKIVGTR 147

[43][TOP]
>UniRef100_B4JGB3 GH18755 n=3 Tax=Drosophila RepID=B4JGB3_DROGR
          Length = 173

 Score =  176 bits (446), Expect = 1e-42
 Identities = 82/151 (54%), Positives = 112/151 (74%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG  L + +  KL  +VEGTC+G++GFV+AVT I+ IG G+I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPQLLETVKQKLYSEVEGTCTGKYGFVIAVTTIDLIGSGVIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF- 480
            G GFV +PVKY+ +VFRPFKGE+L+AVV  +NK+G FAE GP+  F+S+H IP DM+F 
Sbjct: 61  PGQGFVVYPVKYKAIVFRPFKGEVLDAVVKQINKVGMFAEIGPLSCFISHHSIPADMQFC 120

Query: 481 QSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            +G+ P Y + D  V I  + ++RLKI+GTR
Sbjct: 121 PNGNPPCYKSKDEDVVISGEDKIRLKIVGTR 151

[44][TOP]
>UniRef100_A4S3R6 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4S3R6_OSTLU
          Length = 179

 Score =  175 bits (443), Expect = 3e-42
 Identities = 82/151 (54%), Positives = 111/151 (73%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFFH+ LERN+ L PR+FG  ++  L  KL  +VEGTCSGR+GF+V VT +  + +G++ 
Sbjct: 1   MFFHVNLERNITLEPRHFGARMKAVLEEKLRHEVEGTCSGRYGFIVMVTRLAEVSEGVVT 60

Query: 304 D-GTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 480
           D GT    F +KY CVVFRPFKGE+++AVVT VNK GFFAEAGP+Q+FVSN LI +DM+F
Sbjct: 61  DDGTARAKFHIKYDCVVFRPFKGEVMDAVVTQVNKFGFFAEAGPLQLFVSNALITEDMQF 120

Query: 481 QSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            S     Y + D  ++IQ+D+ VR++I+G R
Sbjct: 121 DSSGENCYVSDDQQIRIQRDASVRVRIVGMR 151

[45][TOP]
>UniRef100_UPI000186CD1A mixed-lineage leukemia protein, mll, putative n=1 Tax=Pediculus
           humanus corporis RepID=UPI000186CD1A
          Length = 3311

 Score =  174 bits (441), Expect = 4e-42
 Identities = 85/147 (57%), Positives = 109/147 (74%), Gaps = 1/147 (0%)
 Frame = +1

Query: 136 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTG 315
           I LE  + LHPRYFG  L + +  KL  +VEGTC+G++GFV+AVT I+NIG GLI  G G
Sbjct: 3   ISLEHEILLHPRYFGPQLLETVKQKLYAEVEGTCTGKYGFVIAVTLIDNIGAGLILPGQG 62

Query: 316 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF-QSGD 492
           FV +PVKY+ +VFRPFKGE+L+AVVT VNK+G FAE GP+  F+S+H IP DM+F  + +
Sbjct: 63  FVVYPVKYRAIVFRPFKGEVLDAVVTQVNKVGMFAEIGPLSCFISHHSIPADMQFCPNFN 122

Query: 493 MPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            P Y + D  V IQ D E+RLKI+GTR
Sbjct: 123 PPCYKSKDEDVVIQADDEIRLKIVGTR 149

[46][TOP]
>UniRef100_UPI0000D560AA PREDICTED: similar to GA16051-PA n=1 Tax=Tribolium castaneum
           RepID=UPI0000D560AA
          Length = 173

 Score =  174 bits (440), Expect = 6e-42
 Identities = 83/151 (54%), Positives = 110/151 (72%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHP+YFG  L + + +KL  +VEGTC+G++GFV+AVT I++IG GLI 
Sbjct: 1   MFYHISLEHEILLHPQYFGPQLLEKVKTKLYTEVEGTCTGKYGFVIAVTTIDSIGAGLIL 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G G+V +PVKY+ +VFRPFKGE+L+AVV  VNK+G FAE GP+  F+S+H IP +MEF 
Sbjct: 61  PGQGYVVYPVKYKAIVFRPFKGEVLDAVVRQVNKVGMFAEIGPLSCFISHHSIPAEMEFC 120

Query: 484 SGDMPN-YTTSDGSVKIQKDSEVRLKIIGTR 573
               P  Y T D  V I  + E+RLKI+GTR
Sbjct: 121 PNVNPQCYKTKDEDVVIHAEGEIRLKIVGTR 151

[47][TOP]
>UniRef100_A8QBL6 Polymerase, putative n=1 Tax=Brugia malayi RepID=A8QBL6_BRUMA
          Length = 171

 Score =  172 bits (437), Expect = 1e-41
 Identities = 82/151 (54%), Positives = 115/151 (76%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI L+  + LHP+YFG +L + +  KL  +VEGTC+G++GFVVAVT I+NIG GLI+
Sbjct: 1   MFYHIPLDHEICLHPKYFGPDLLETVKRKLFNEVEGTCTGKYGFVVAVTTIDNIGAGLIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +PVKY+ +VFRPFKG++++AV   VN++G F + GP+  FVS H IP DMEF+
Sbjct: 61  PGRGFVLYPVKYKAIVFRPFKGQVVDAV---VNQVGLFCDIGPLSCFVSRHCIPPDMEFE 117

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + + P Y T+D SV I++D E+R+K+IGTR
Sbjct: 118 PNSNPPCYKTADESVVIKQDDEIRVKLIGTR 148

[48][TOP]
>UniRef100_Q7PYV3 AGAP002121-PA n=1 Tax=Anopheles gambiae RepID=Q7PYV3_ANOGA
          Length = 173

 Score =  171 bits (434), Expect = 3e-41
 Identities = 81/151 (53%), Positives = 109/151 (72%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG  L + +  KL  +VEGTC+G++GFV+AVT I++IG G I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPQLIETVKQKLYTEVEGTCTGKYGFVIAVTTIDDIGSGTIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF- 480
            G GFV +PVKY+ +VFRPFKGE+L+A V  VNK+G FAE GP+  F+S+H IP DM+F 
Sbjct: 61  PGQGFVVYPVKYKAIVFRPFKGEVLDATVKQVNKVGMFAEIGPLSCFISHHSIPADMQFC 120

Query: 481 QSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            +G  P Y   +G   I  + ++RLKI+GTR
Sbjct: 121 PNGAPPCYRAINGESVIAAEDKIRLKIVGTR 151

[49][TOP]
>UniRef100_B3S0W7 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
           RepID=B3S0W7_TRIAD
          Length = 172

 Score =  169 bits (429), Expect = 1e-40
 Identities = 78/151 (51%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFFH+ LE  + LHPRYFG NL D +  KL  +VEGTCSG+HGFV+AVT I+ +G G I 
Sbjct: 1   MFFHVTLEHEITLHPRYFGPNLLDTVRRKLFSEVEGTCSGKHGFVIAVTIIDKVGVGKIL 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
             +GFV +PV+Y+ +VF+PF GE+++ +VT +NK+G F E GP+  F+S + IP DM F 
Sbjct: 61  PNSGFVVYPVRYKAIVFKPFPGEVVDGIVTQLNKVGLFVEVGPLTCFISKYSIPRDMFFD 120

Query: 484 -SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            +G+ P + T D  + +Q   EVRLKI+GTR
Sbjct: 121 PNGNPPCFRTEDEDMIVQTGDEVRLKIVGTR 151

[50][TOP]
>UniRef100_A8ISK2 DNA-directed RNA polymerase II, 19 kDa polypeptide n=1
           Tax=Chlamydomonas reinhardtii RepID=A8ISK2_CHLRE
          Length = 176

 Score =  169 bits (427), Expect = 2e-40
 Identities = 74/151 (49%), Positives = 116/151 (76%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+ + L +++ +HP++FG  LR+ +  KL+ + EGTC+G++G+VVAVT +++IG+G IR
Sbjct: 1   MFYFLTLSKSLDIHPKHFGSKLREVIREKLIAETEGTCTGKYGYVVAVTKVDDIGRGRIR 60

Query: 304 -DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 480
            D +G+ TF V Y C+V RP+KGE+L+AVVT VNKMGFFA+AGP+Q+FV+ HLIPD+ EF
Sbjct: 61  QDQSGYATFEVSYGCIVCRPYKGEVLDAVVTSVNKMGFFAQAGPLQLFVTQHLIPDEFEF 120

Query: 481 QSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + D  ++ + D + +IQ  + VR++I+G +
Sbjct: 121 DTSDDNSWISMDQTTRIQGGTHVRIRIVGIK 151

[51][TOP]
>UniRef100_Q00ZY7 DNA-directed RNA polymerase subunit E' (ISS) n=1 Tax=Ostreococcus
            tauri RepID=Q00ZY7_OSTTA
          Length = 1353

 Score =  167 bits (423), Expect = 5e-40
 Identities = 84/167 (50%), Positives = 113/167 (67%), Gaps = 17/167 (10%)
 Frame = +1

Query: 124  MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVE----------------GTCSGRHGF 255
            MFFH+ LERN+ L PR+FG  +R  L  KL  +VE                GTCSGR+GF
Sbjct: 1160 MFFHVNLERNITLEPRHFGARMRAVLEEKLRHEVESSRLTPTDAFTNTQVEGTCSGRYGF 1219

Query: 256  VVAVTGIENIGKGLI-RDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGP 432
            +V VT ++++ +G++  DGT    F VKY CVVFRPFKGE+++AVVT VNK GFFAEAGP
Sbjct: 1220 IVMVTRVDDVSEGVVVDDGTARAKFHVKYDCVVFRPFKGEVVDAVVTQVNKFGFFAEAGP 1279

Query: 433  VQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            +Q+FVSN LI +DM+F S     Y + D  ++IQ+D+ VR++I+G R
Sbjct: 1280 LQLFVSNALITEDMQFDSSGENCYVSDDQQIRIQRDASVRVRIVGMR 1326

[52][TOP]
>UniRef100_Q54P04 DNA-directed RNA polymerase II subunit rpb7 n=1 Tax=Dictyostelium
           discoideum RepID=RPB7_DICDI
          Length = 172

 Score =  167 bits (423), Expect = 5e-40
 Identities = 75/151 (49%), Positives = 110/151 (72%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFFH+ LE+++ +HP++ G NL      +L  +VEGTC+GR+GF++ +T ++ + KG + 
Sbjct: 1   MFFHLTLEKDLHMHPKHCGPNLFTIATQQLYSEVEGTCTGRYGFIITITSVDFLSKGKVL 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           + +G+V F VKY+ ++F+PFKGE+L+A+VT V  +GFFAEAGP+ IFVS  LIP DM F 
Sbjct: 61  ESSGYVVFNVKYKAIIFKPFKGEVLDAIVTKVTNLGFFAEAGPLSIFVSTQLIPSDMIFD 120

Query: 484 S-GDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           +   +P + + DGS KI KD EVRL+I GTR
Sbjct: 121 AQSAVPCFVSEDGSSKISKDDEVRLQIKGTR 151

[53][TOP]
>UniRef100_UPI000194E41D PREDICTED: similar to polymerase (RNA) II (DNA directed)
           polypeptide G, partial n=1 Tax=Taeniopygia guttata
           RepID=UPI000194E41D
          Length = 133

 Score =  160 bits (406), Expect = 5e-38
 Identities = 73/132 (55%), Positives = 99/132 (75%), Gaps = 1/132 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHPRYFG NL + +  KL  +VEGTC+G++GFV+AVT I+N+G G+I+
Sbjct: 1   MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNVGAGVIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G GFV +PV+Y+ +VFRPFKGE+++AVVT VNK+G F E GP+  F+S H IP +MEF 
Sbjct: 61  PGRGFVLYPVRYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120

Query: 484 -SGDMPNYTTSD 516
            + + P Y T D
Sbjct: 121 PNSNPPCYKTVD 132

[54][TOP]
>UniRef100_Q5DB36 SJCHGC02592 protein n=1 Tax=Schistosoma japonicum
           RepID=Q5DB36_SCHJA
          Length = 175

 Score =  160 bits (405), Expect = 6e-38
 Identities = 74/158 (46%), Positives = 112/158 (70%), Gaps = 8/158 (5%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHP+YFG NL + + +KL  DVEGTCSG++GF++AVT IE+IG G+I+
Sbjct: 1   MFYHIKLEHEILLHPKYFGPNLTETVKTKLFSDVEGTCSGKYGFIIAVTNIEHIGAGIIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
              GFV + + Y+ +V+RPFKGE+++A+VT V K+G FAEAGP+ IF+S + +P +++F+
Sbjct: 61  PNRGFVQYRIVYRAIVYRPFKGEVVDAIVTQVTKVGVFAEAGPLTIFISKYSVPSNIKFE 120

Query: 484 SGDMPNYTTSDG--------SVKIQKDSEVRLKIIGTR 573
             +    TT+DG        S  +Q +  +R++IIG R
Sbjct: 121 GAE----TTTDGLNDDDEEESQTVQIEDRIRIRIIGLR 154

[55][TOP]
>UniRef100_C1MQF2 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1MQF2_9CHLO
          Length = 174

 Score =  159 bits (401), Expect = 2e-37
 Identities = 77/152 (50%), Positives = 109/152 (71%), Gaps = 2/152 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFFHI  E+N+ L P YFG+ +R+ + S++ ++VEG+C+GRHG++V VT I +I +G+I 
Sbjct: 1   MFFHIEQEKNIVLEPMYFGKRMREMIESRVRQEVEGSCTGRHGYIVMVTNIVHISEGMIT 60

Query: 304 D-GTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 480
           D GT    F VKY  + FRPFK E+L+ VV  V K GFFAEAGP+++FVSN L+P++M F
Sbjct: 61  DDGTARAKFHVKYSAIAFRPFKNEVLDCVVVQVTKFGFFAEAGPLKLFVSNQLVPEEMVF 120

Query: 481 QSGDMPNYT-TSDGSVKIQKDSEVRLKIIGTR 573
           +S D   Y   +D S +I KD EVR+K++G R
Sbjct: 121 ESVDENAYVDKTDISHRIVKDIEVRVKVVGLR 152

[56][TOP]
>UniRef100_A5DHT0 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
           RepID=A5DHT0_PICGU
          Length = 173

 Score =  157 bits (397), Expect = 5e-37
 Identities = 83/153 (54%), Positives = 106/153 (69%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 297
           MFF   L  N+ LHP YFG  +   L SKL+ DVEGTC+G+ G++V V    NI  GKG 
Sbjct: 1   MFFLKDLSLNLTLHPSYFGPQMDSYLRSKLLSDVEGTCTGQFGYIVCVLDCMNIDVGKGK 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 477
           I  G+G   F VKY+ VV++PFKGE+++AVVT VNKMGFFA+ GP+ +FVS HLIP DM+
Sbjct: 61  IIPGSGMAEFEVKYRAVVWKPFKGEVVDAVVTTVNKMGFFADVGPLSVFVSTHLIPSDMK 120

Query: 478 FQ-SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           F  S + P Y + D +  I+K S VRLKI+GTR
Sbjct: 121 FNPSANPPAYVSPDEN--IEKGSRVRLKIVGTR 151

[57][TOP]
>UniRef100_UPI000151B414 hypothetical protein PGUG_02831 n=1 Tax=Pichia guilliermondii ATCC
           6260 RepID=UPI000151B414
          Length = 173

 Score =  155 bits (393), Expect = 2e-36
 Identities = 83/153 (54%), Positives = 106/153 (69%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 297
           MFF   L  N+ LHP YFG  +   L SKL+ DVEGTC+G+ G++V V    NI  GKG 
Sbjct: 1   MFFLKDLSLNLTLHPSYFGPQMDLYLRSKLLSDVEGTCTGQFGYIVCVLDCMNIDVGKGK 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 477
           I  G+G   F VKY+ VV++PFKGE+++AVVT VNKMGFFA+ GP+ +FVS HLIP DM+
Sbjct: 61  IIPGSGMAEFEVKYRAVVWKPFKGEVVDAVVTTVNKMGFFADVGPLSVFVSTHLIPSDMK 120

Query: 478 FQ-SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           F  S + P Y + D +  I+K S VRLKI+GTR
Sbjct: 121 FNPSANPPAYVSPDEN--IEKGSRVRLKIVGTR 151

[58][TOP]
>UniRef100_A3GFG7 RNA polymerase II subunit n=1 Tax=Pichia stipitis
           RepID=A3GFG7_PICST
          Length = 173

 Score =  155 bits (393), Expect = 2e-36
 Identities = 82/153 (53%), Positives = 105/153 (68%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 297
           MFF   L  N+ LHP YFG  +   L  KL+ DVEGTC+G+ G++V V    NI  GKG 
Sbjct: 1   MFFLKDLSLNLTLHPSYFGPQMDQYLRDKLLSDVEGTCTGQFGYIVCVLDCMNIDVGKGR 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 477
           I  G+G   F VKY+ VV++PFKGE+++AVVT VNKMGFFA+ GP+ +FVS HLIP DM+
Sbjct: 61  IIPGSGMAEFEVKYRAVVWKPFKGEVVDAVVTTVNKMGFFADVGPLSVFVSTHLIPSDMK 120

Query: 478 FQ-SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           F  S + P Y + D +  I+K S VRLKI+GTR
Sbjct: 121 FNPSANPPAYVSPDEN--IEKGSRVRLKIVGTR 151

[59][TOP]
>UniRef100_B7PE24 DNA-directed RNA polymerase subunit E', putative (Fragment) n=1
           Tax=Ixodes scapularis RepID=B7PE24_IXOSC
          Length = 173

 Score =  155 bits (391), Expect = 3e-36
 Identities = 77/149 (51%), Positives = 101/149 (67%), Gaps = 1/149 (0%)
 Frame = +1

Query: 130 FHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDG 309
           F I L+  + LHPRYFG  L + +  KL  +VEGTC+G++GFVVAV  I+NIG GLI+ G
Sbjct: 1   FQISLDHEILLHPRYFGPQLEETVKQKLYAEVEGTCTGKYGFVVAVMTIDNIGAGLIQPG 60

Query: 310 TGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-S 486
            GFV +PV+Y  +VFRPFKGE+L+AVVT VNK+          + +S   IP DM+F  +
Sbjct: 61  RGFVVYPVRYTAIVFRPFKGEVLDAVVTQVNKVSGVGAPDTDSVCISFQSIPSDMQFDPN 120

Query: 487 GDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            + P Y T D  V IQ+D E+RLKI+GTR
Sbjct: 121 SNPPCYRTQDEDVIIQQDDEIRLKIVGTR 149

[60][TOP]
>UniRef100_Q6BIU6 DEHA2G07546p n=1 Tax=Debaryomyces hansenii RepID=Q6BIU6_DEBHA
          Length = 173

 Score =  155 bits (391), Expect = 3e-36
 Identities = 81/153 (52%), Positives = 105/153 (68%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 297
           MFF   L  N+ LHP YFG  +   L  KL+ DVEGTC+G+ G++V V    NI  GKG 
Sbjct: 1   MFFLKDLSLNLTLHPSYFGPQMDQYLRDKLLSDVEGTCTGQFGYIVCVLDCMNIDVGKGR 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 477
           +  G+G   F VKY+ VV++PFKGE+++AVVT VNKMGFFA+ GP+ +FVS HLIP DM+
Sbjct: 61  VIPGSGVAEFEVKYRAVVWKPFKGEVVDAVVTTVNKMGFFADVGPLSVFVSTHLIPSDMK 120

Query: 478 FQ-SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           F  S + P Y + D +  I+K S VRLKI+GTR
Sbjct: 121 FNPSANPPAYVSPDEN--IEKGSRVRLKIVGTR 151

[61][TOP]
>UniRef100_B6JXX4 DNA-directed RNA polymerase II subunit RPB7 n=1
           Tax=Schizosaccharomyces japonicus yFS275
           RepID=B6JXX4_SCHJY
          Length = 172

 Score =  154 bits (390), Expect = 4e-36
 Identities = 77/152 (50%), Positives = 108/152 (71%), Gaps = 3/152 (1%)
 Frame = +1

Query: 127 FFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAV--TGIENIGKGLI 300
           FF   L   + LHP YFG ++RD L +KL+ DVEGTCSG++G+++ V  +   +I KG +
Sbjct: 3   FFLKELSLTISLHPSYFGPHMRDYLKAKLLADVEGTCSGQYGYIICVLDSNTIDIDKGKV 62

Query: 301 RDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 480
             G GF  F VKY+ +++RPF+GE+++AVVT VNKMGFFA+ GP+ +FVS+HL+P DM F
Sbjct: 63  IPGQGFAEFEVKYRAILWRPFRGEVVDAVVTTVNKMGFFADVGPLSVFVSSHLVPPDMTF 122

Query: 481 Q-SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
             + + PNY+  D    I+K S VRLKI+GTR
Sbjct: 123 DPAANPPNYSGED--QVIEKGSNVRLKIVGTR 152

[62][TOP]
>UniRef100_C4YFA6 DNA-directed RNA polymerase II 19 kDa polypeptide n=1 Tax=Candida
           albicans RepID=C4YFA6_CANAL
          Length = 173

 Score =  153 bits (387), Expect = 8e-36
 Identities = 82/153 (53%), Positives = 105/153 (68%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 297
           MFF   L  N+ LHP +FG  +   L  KL+ DVEGTC+G+ G++V V    NI  GKG 
Sbjct: 1   MFFLKDLSLNLTLHPSFFGPQMDQYLREKLLSDVEGTCTGQFGYIVCVLDSMNIDVGKGR 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 477
           I   TG V F VKY+ VV++PFKGE+++AVVT VNKMGFFA+ GP+ +FVS HLIP DM+
Sbjct: 61  IIPSTGKVEFEVKYRAVVWKPFKGEVVDAVVTTVNKMGFFADVGPLSVFVSTHLIPSDMK 120

Query: 478 FQ-SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           F  S + P Y + D +  I+K S VRLKI+GTR
Sbjct: 121 FNPSANPPAYVSPDEN--IEKGSRVRLKIVGTR 151

[63][TOP]
>UniRef100_Q5DBG3 Putative uncharacterized protein n=1 Tax=Schistosoma japonicum
           RepID=Q5DBG3_SCHJA
          Length = 157

 Score =  153 bits (386), Expect = 1e-35
 Identities = 67/132 (50%), Positives = 100/132 (75%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF+HI LE  + LHP+YFG NL + + +KL  DVEGTCSG++GF++AVT IE+IG G+I+
Sbjct: 1   MFYHIKLEHEILLHPKYFGPNLTETVKTKLFSDVEGTCSGKYGFIIAVTNIEHIGAGIIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
              GFV + + Y+ +V+RPFKGE+++A+VT V K+G FAEAGP+ IF+S + +P +++F+
Sbjct: 61  PNRGFVQYRIVYRAIVYRPFKGEVVDAIVTQVTKVGVFAEAGPLTIFISKYSVPSNIKFE 120

Query: 484 SGDMPNYTTSDG 519
             +    TT+DG
Sbjct: 121 GAE----TTTDG 128

[64][TOP]
>UniRef100_Q5A8Y7 Likely RNA Pol II core complex subunit n=2 Tax=Candida
           RepID=Q5A8Y7_CANAL
          Length = 173

 Score =  153 bits (386), Expect = 1e-35
 Identities = 81/153 (52%), Positives = 104/153 (67%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 297
           MFF   L  N+ LHP +FG  +   L  KL+ DVEGTC+G+ G++V V    NI  GKG 
Sbjct: 1   MFFLKDLSLNLTLHPSFFGPQMDQYLREKLLSDVEGTCTGQFGYIVCVLDSMNIDVGKGR 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 477
           I   TG   F VKY+ VV++PFKGE+++AVVT VNKMGFFA+ GP+ +FVS HLIP DM+
Sbjct: 61  IIPSTGMAEFEVKYRAVVWKPFKGEVVDAVVTTVNKMGFFADVGPLSVFVSTHLIPSDMK 120

Query: 478 FQ-SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           F  S + P Y + D +  I+K S VRLKI+GTR
Sbjct: 121 FNPSANPPAYVSPDEN--IEKGSRVRLKIVGTR 151

[65][TOP]
>UniRef100_A5DVP2 DNA-directed RNA polymerase II 19 kDa polypeptide n=1
           Tax=Lodderomyces elongisporus RepID=A5DVP2_LODEL
          Length = 173

 Score =  152 bits (384), Expect = 2e-35
 Identities = 80/153 (52%), Positives = 105/153 (68%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 297
           MFF   L  N+ LHP YFG  +   L  KL+ DVEGTC+G+ G++V V    NI  GKG 
Sbjct: 1   MFFLKDLSLNLTLHPSYFGPQMDQYLRDKLLSDVEGTCTGQFGYIVCVLDSMNIDVGKGR 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 477
           I   +G   F VKY+ VV++PFKGE+++ VVT VNKMGFFA+ GP+ +FVS HLIP DM+
Sbjct: 61  IIPSSGMAEFEVKYRAVVWKPFKGEVVDGVVTTVNKMGFFADVGPLSVFVSTHLIPSDMK 120

Query: 478 FQ-SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           F  S + P Y++ D +  I+K S+VRLKI+GTR
Sbjct: 121 FNPSANPPAYSSPDEN--IEKGSKVRLKIVGTR 151

[66][TOP]
>UniRef100_O14459 DNA-directed RNA polymerase II subunit rpb7 n=1
           Tax=Schizosaccharomyces pombe RepID=RPB7_SCHPO
          Length = 172

 Score =  152 bits (384), Expect = 2e-35
 Identities = 76/152 (50%), Positives = 107/152 (70%), Gaps = 3/152 (1%)
 Frame = +1

Query: 127 FFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAV--TGIENIGKGLI 300
           FF   L   + LHP YFG  ++D L +KL+ DVEGTCSG++G+++ V  +   +I KG +
Sbjct: 3   FFLKELSLTISLHPSYFGPRMQDYLKAKLLADVEGTCSGQYGYIICVLDSNTIDIDKGRV 62

Query: 301 RDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 480
             G GF  F VKY+ V++RPF+GE+++A+VT VNKMGFFA  GP+ +FVS+HL+P DM+F
Sbjct: 63  VPGQGFAEFEVKYRAVLWRPFRGEVVDAIVTTVNKMGFFANIGPLNVFVSSHLVPPDMKF 122

Query: 481 Q-SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
             + + PNY+  D    I+K S VRLKI+GTR
Sbjct: 123 DPTANPPNYSGED--QVIEKGSNVRLKIVGTR 152

[67][TOP]
>UniRef100_C5MEG1 DNA-directed RNA polymerase II 19 kDa polypeptide n=1 Tax=Candida
           tropicalis MYA-3404 RepID=C5MEG1_CANTT
          Length = 173

 Score =  152 bits (383), Expect = 2e-35
 Identities = 79/153 (51%), Positives = 106/153 (69%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 297
           MFF   L  N+ LHP +FG  +   L  KL+ DVEGTC+G+ G++V V    +I  GKG 
Sbjct: 1   MFFLKDLSLNLTLHPSFFGPQMDQYLRDKLLSDVEGTCTGQFGYIVCVLDSSHIDVGKGR 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 477
           I  GTG   F VKY+ VV++PFKGE+++AVV  VNKMGFFA+ GP+ +FVS HLIP DM+
Sbjct: 61  IIPGTGMAEFEVKYRAVVWKPFKGEVVDAVVHTVNKMGFFADVGPLSVFVSTHLIPSDMK 120

Query: 478 F-QSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           +  S + P+Y+++D    I+K S VRLKI+GTR
Sbjct: 121 YNSSANPPSYSSND--EHIEKGSRVRLKIVGTR 151

[68][TOP]
>UniRef100_C4Q0F7 DNA-directed rna polymerase II 19 kD polypeptide rpb7, putative n=1
           Tax=Schistosoma mansoni RepID=C4Q0F7_SCHMA
          Length = 194

 Score =  150 bits (380), Expect = 5e-35
 Identities = 70/154 (45%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
 Frame = +1

Query: 136 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTG 315
           I LE  + LHP+YFG NL + + +KL  DVEGTCSG++GF++AVT IE+IG G+I+   G
Sbjct: 28  IKLEHEILLHPKYFGPNLTETVKTKLFSDVEGTCSGKYGFIIAVTNIEHIGAGIIQPNRG 87

Query: 316 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDM 495
           FV + + Y+ +V+RPFKGE+++A+VT V K+G FAEAGP+ IF+S + +P +++F+  + 
Sbjct: 88  FVQYRIVYRAIVYRPFKGEVVDAIVTQVTKVGVFAEAGPLTIFISKYSVPSNIKFEGAE- 146

Query: 496 PNYTTSDG--------SVKIQKDSEVRLKIIGTR 573
              TT+DG        +  +Q +  +R++IIG R
Sbjct: 147 ---TTTDGLNDEDEEETQTVQIEDRIRIRIIGLR 177

[69][TOP]
>UniRef100_B0DKE6 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
           RepID=B0DKE6_LACBS
          Length = 170

 Score =  150 bits (378), Expect = 9e-35
 Identities = 74/150 (49%), Positives = 101/150 (67%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   L   + LHP YFG  + + L SKL  DVEGTCSG+ G+++AV  I +IGKG++ 
Sbjct: 1   MFFIKELTHTILLHPSYFGPRMLNFLESKLYSDVEGTCSGQFGYIIAVVSILDIGKGMVL 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   F  +Y+ +VF+PFKGE+++ VV  VNKMGFFA+ GP+ +FVS+ LI  DM F 
Sbjct: 61  SGSGQAEFITRYRAIVFKPFKGEVVDGVVNNVNKMGFFADVGPLTVFVSHQLIHPDMRFD 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P    SD  + I+K++ VRLKI+GTR
Sbjct: 121 PNSNPPSFASDEQI-IEKNTRVRLKIVGTR 149

[70][TOP]
>UniRef100_A8N5F1 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
           okayama7#130 RepID=A8N5F1_COPC7
          Length = 170

 Score =  149 bits (375), Expect = 2e-34
 Identities = 72/150 (48%), Positives = 102/150 (68%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   L   + LHP YFG  +   L +KL  DVEGTCSG+ G+++AV  I +IGKG++ 
Sbjct: 1   MFFIKELTHTILLHPSYFGPQMLSYLETKLYNDVEGTCSGQFGYIIAVVSILDIGKGMVL 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   F  +Y+ +VF+PFKGE+++ VV  VNKMGFFA+ GP+ +FVS+ LI  DM+F 
Sbjct: 61  SGSGQAEFITRYRAIVFKPFKGEVVDGVVNNVNKMGFFADVGPLSVFVSHQLIHPDMKFD 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P    S+  + I+K+++VRLKI+GTR
Sbjct: 121 PNSNPPSFASEDQI-IEKNTKVRLKIVGTR 149

[71][TOP]
>UniRef100_A7ER17 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum
           1980 UF-70 RepID=A7ER17_SCLS1
          Length = 167

 Score =  148 bits (374), Expect = 3e-34
 Identities = 73/150 (48%), Positives = 103/150 (68%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LER + LHP YFGRN+ + +  KL+KDVEGTC+G + +++ +    NI +G I 
Sbjct: 1   MFFLYNLERQVTLHPSYFGRNMHELVTGKLLKDVEGTCTGLY-YIITIMDTFNISEGRIL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   F V Y+ VV+RPFKGE ++A+VT VN +GFFA+AGP+ +FVS HLIP D++F 
Sbjct: 60  PGSGLAEFTVGYRAVVWRPFKGETVDAIVTSVNAVGFFADAGPLPLFVSAHLIPRDIKFD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           +   P   T++    I+  + VR+KIIGTR
Sbjct: 120 ANATPPQFTNNEDSVIEPGTHVRVKIIGTR 149

[72][TOP]
>UniRef100_A6SL82 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
           B05.10 RepID=A6SL82_BOTFB
          Length = 172

 Score =  148 bits (374), Expect = 3e-34
 Identities = 73/150 (48%), Positives = 103/150 (68%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LER + LHP YFGRN+ + +  KL+KDVEGTC+G + +++ +    NI +G I 
Sbjct: 1   MFFLYNLERQVTLHPSYFGRNMHELVTGKLLKDVEGTCTGLY-YIITIMDTFNISEGRIL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   F V Y+ VV+RPFKGE ++A+VT VN +GFFA+AGP+ +FVS HLIP D++F 
Sbjct: 60  PGSGLAEFTVGYRAVVWRPFKGETVDAIVTSVNAVGFFADAGPLPLFVSAHLIPRDIKFD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           +   P   T++    I+  + VR+KIIGTR
Sbjct: 120 ANATPPQFTNNEDSVIEPGTHVRVKIIGTR 149

[73][TOP]
>UniRef100_B8P5T6 Predicted protein n=1 Tax=Postia placenta Mad-698-R
           RepID=B8P5T6_POSPM
          Length = 170

 Score =  148 bits (373), Expect = 3e-34
 Identities = 72/150 (48%), Positives = 102/150 (68%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   L   + LHP YFG  +   L SKL  DVEGTCSG+ G+++AV  I +IGKG++ 
Sbjct: 1   MFFIKELSHTILLHPSYFGPRMLQFLESKLYSDVEGTCSGQFGYIIAVVSILDIGKGMVI 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   F  +Y+ +VF+PFKGE+++ VV  VNKMGFFA+ GP+ +FVS+ LI  D++F 
Sbjct: 61  SGSGQAEFITRYRAIVFKPFKGEVVDGVVNNVNKMGFFADVGPLTVFVSHQLIHPDLKFD 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P    S+  + I+K+++VRLKI+GTR
Sbjct: 121 PNSNPPSFASEDQI-IEKNTKVRLKIVGTR 149

[74][TOP]
>UniRef100_Q4P3H9 Putative uncharacterized protein n=1 Tax=Ustilago maydis
           RepID=Q4P3H9_USTMA
          Length = 170

 Score =  146 bits (369), Expect = 1e-33
 Identities = 72/150 (48%), Positives = 101/150 (67%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   L    +LHP YFG ++ + L  KL  DVEGTC+G+HG+++ V G+ ++G+G + 
Sbjct: 1   MFFLKHLTHKTELHPSYFGPSMVEFLNQKLRDDVEGTCTGKHGYIIKVIGLVDVGQGKVI 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   F   YQ VV +PFKGE+++A +T VNKMGFFAE GP+ IFVS+HLIP + +FQ
Sbjct: 61  PGSGLAEFNSTYQAVVLKPFKGEVMDAKITNVNKMGFFAEVGPLNIFVSSHLIPIEYKFQ 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P    S  S ++ K  +VR+KI+GTR
Sbjct: 121 PESNPPEFVS-ASDRLVKGRKVRIKIVGTR 149

[75][TOP]
>UniRef100_Q2HAA7 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
           RepID=Q2HAA7_CHAGB
          Length = 202

 Score =  146 bits (369), Expect = 1e-33
 Identities = 67/150 (44%), Positives = 107/150 (71%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LER + LHP YFGRN+ + + +KL+KDVEGTC+G + +++A+    ++ +G I 
Sbjct: 1   MFFLHNLERRVTLHPSYFGRNMHELVTTKLVKDVEGTCAGDY-YIIAIMDTFDVSEGRIL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   F V Y+ VV+RPFKGE+++A+   VN  GFFA+AGP+++FVS+HL+PD++++ 
Sbjct: 60  PGSGLAEFTVGYRAVVWRPFKGEVIDAITQTVNPHGFFAQAGPLRLFVSSHLMPDEIQYD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           +   P   T++  + I++ + VR+KIIG R
Sbjct: 120 ASATPAQFTNNADIVIEQGTHVRVKIIGLR 149

[76][TOP]
>UniRef100_Q5KHZ6 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans
           RepID=Q5KHZ6_CRYNE
          Length = 172

 Score =  145 bits (365), Expect = 3e-33
 Identities = 73/150 (48%), Positives = 98/150 (65%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   L   + LHP YFG  L D L  KL +DVEGTCSG+HG++++V  I +IG+G I 
Sbjct: 1   MFFLRELTHTILLHPSYFGAQLEDYLRQKLYEDVEGTCSGKHGYIISVITITDIGEGKII 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
             TG   F  +Y  +V +PFKGE+++A V  VNKMGFFA  GP+Q+FVS HL   DM+F 
Sbjct: 61  PSTGQAKFKTRYTAIVMKPFKGEVVDAKVVNVNKMGFFAMVGPLQVFVSCHLTHSDMKFD 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P    S+  + IQKD++VR++I+G R
Sbjct: 121 PSVSPPCYRSNDEI-IQKDTKVRIQIVGCR 149

[77][TOP]
>UniRef100_Q6MV30 Probable DNA-directed RNA polymerase II chain Rpb7 n=1
           Tax=Neurospora crassa RepID=Q6MV30_NEUCR
          Length = 167

 Score =  141 bits (356), Expect = 3e-32
 Identities = 67/150 (44%), Positives = 102/150 (68%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LER + LHP YFGRN+ + + +KL+KDVEGTC+G + +++A+    ++ +G I 
Sbjct: 1   MFFLHNLERRVTLHPSYFGRNMHELVTTKLVKDVEGTCAGDY-YIIAIMDAFDVSEGRIL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G G   F VKY+ VV+RPFKGE+++A+V  +N  GFF +AGP+ IFVS+HL+P+++ F 
Sbjct: 60  PGNGLAEFTVKYRAVVWRPFKGEVVDAIVFSINPHGFFCQAGPLSIFVSSHLMPEEIHFD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P   T++  + I+  + VR+KI G R
Sbjct: 120 PNATPPQFTNNADMVIEPGTHVRVKIGGLR 149

[78][TOP]
>UniRef100_B2ATR6 Predicted CDS Pa_1_16720 n=1 Tax=Podospora anserina
           RepID=B2ATR6_PODAN
          Length = 249

 Score =  140 bits (352), Expect = 9e-32
 Identities = 66/150 (44%), Positives = 102/150 (68%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LER + LHP YFG+N+ + + +KL+KDVEGTC+G + +++A+    ++ +G I 
Sbjct: 1   MFFLHNLERRVLLHPSYFGKNMTELVTTKLVKDVEGTCTGDY-YIIAIMDTFDLSEGRIL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   F V Y+ VV+RPFKGE+++A+ T VN+ GFF+ AGP+ IFVS H IP D+++ 
Sbjct: 60  PGSGMAEFTVGYRAVVWRPFKGEVVDAICTSVNQHGFFSNAGPLSIFVSTHSIPPDIQYD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           +   P   T+   + I+  + VR+KI+G R
Sbjct: 120 ANATPPQFTNHSDIVIEPGTHVRIKIMGLR 149

[79][TOP]
>UniRef100_C9SIH0 DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Verticillium
           albo-atrum VaMs.102 RepID=C9SIH0_9PEZI
          Length = 177

 Score =  139 bits (350), Expect = 2e-31
 Identities = 70/150 (46%), Positives = 101/150 (67%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   +ER + LHP YFGRN+ D + SKL+KDVEGT +G + +V+++    +I +G I 
Sbjct: 1   MFFLKNMERRVTLHPSYFGRNMHDLVTSKLLKDVEGTFAGSY-YVISIMDTFDISEGKIL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   F V Y+ VV+RPFKGE ++AVV  VN  GFFA+AGP+++FVS HLIP ++++ 
Sbjct: 60  PGSGLAEFNVGYRAVVWRPFKGETVDAVVYSVNHQGFFAQAGPLRLFVSAHLIPSEIKWD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P   T +    I+  + VR+K+IGTR
Sbjct: 120 PNATPPQFTDNDDTIIEPGTHVRVKVIGTR 149

[80][TOP]
>UniRef100_B5FVE7 YALI0D11627p n=1 Tax=Yarrowia lipolytica RepID=B5FVE7_YARLI
          Length = 190

 Score =  135 bits (341), Expect = 2e-30
 Identities = 70/146 (47%), Positives = 96/146 (65%), Gaps = 2/146 (1%)
 Frame = +1

Query: 142 LERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIE-NIGKGLIRDGTGF 318
           L  ++ LHP YFG  +   L SKL+ DVEGTC+G  G+++ V     +IGKG +    G 
Sbjct: 27  LTLSLTLHPSYFGPQMGQYLRSKLLADVEGTCTGEFGYILCVLDQPFDIGKGRVVPSNGS 86

Query: 319 VTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-SGDM 495
             F V Y+ +V+RPFK E+++A+VT VNKMGFF + GP+ +FVS+HLIP DM+F  S + 
Sbjct: 87  AEFTVNYRAIVWRPFKNEVVDAIVTNVNKMGFFGDVGPLSVFVSSHLIPPDMKFNPSANP 146

Query: 496 PNYTTSDGSVKIQKDSEVRLKIIGTR 573
           P Y + D    I+K S VRLKI+G R
Sbjct: 147 PAYVSED--QVIEKGSRVRLKIVGVR 170

[81][TOP]
>UniRef100_Q55UE9 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans
           RepID=Q55UE9_CRYNE
          Length = 169

 Score =  134 bits (338), Expect = 4e-30
 Identities = 70/150 (46%), Positives = 95/150 (63%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   L   + LHP YFG  L D L  KL +DVEGTCSG+HG++++V  I +IG+G I 
Sbjct: 1   MFFLRELTHTILLHPSYFGAQLEDYLRQKLYEDVEGTCSGKHGYIISVITITDIGEGKII 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
             TG   F  +Y  +V +PFKGE+++A V     MGFFA  GP+Q+FVS HL   DM+F 
Sbjct: 61  PSTGQAKFKTRYTAIVMKPFKGEVVDAKVV---NMGFFAMVGPLQVFVSCHLTHSDMKFD 117

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P    S+  + IQKD++VR++I+G R
Sbjct: 118 PSVSPPCYRSNDEI-IQKDTKVRIQIVGCR 146

[82][TOP]
>UniRef100_C4R9A1 RNA polymerase II subunit n=1 Tax=Pichia pastoris GS115
           RepID=C4R9A1_PICPG
          Length = 171

 Score =  134 bits (337), Expect = 5e-30
 Identities = 72/153 (47%), Positives = 101/153 (66%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 297
           MFF   L   + LHP YFG  +   L  KL+ DVEGTC+G+ G++V V    NI  GKG 
Sbjct: 1   MFFLKDLSLILTLHPSYFGPQMNQYLREKLLTDVEGTCTGQFGYIVTVLDGMNIDVGKGR 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 477
           I  G+G   F VKY+ VV++PFKGE+++A+V+ V+ +GFFA+ GP+ +FVS  LIPD++ 
Sbjct: 61  IIPGSGSAEFEVKYRAVVWKPFKGEVVDAIVSNVSPIGFFADVGPLNVFVSTRLIPDNLV 120

Query: 478 FQ-SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           +  S   P Y ++D    I K S+VRLK++GTR
Sbjct: 121 YNPSNSPPAYMSND--ELITKGSKVRLKVVGTR 151

[83][TOP]
>UniRef100_UPI000023E344 hypothetical protein FG01220.1 n=1 Tax=Gibberella zeae PH-1
           RepID=UPI000023E344
          Length = 248

 Score =  133 bits (335), Expect = 8e-30
 Identities = 69/156 (44%), Positives = 99/156 (63%), Gaps = 6/156 (3%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LER + LHP + GRN+ + +  KL+KDVEGTC+G + F++++     I +G I 
Sbjct: 1   MFFLYNLERKVTLHPSFMGRNMHELVTGKLLKDVEGTCAGSY-FIISIMDAFEISEGRIL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEI------LEAVVTMVNKMGFFAEAGPVQIFVSNHLIP 465
            G G   F V Y+ VV+RPFKGE       ++AVV  +N  GFFA AGP+++FVS HLIP
Sbjct: 60  PGLGMAEFTVGYRAVVWRPFKGETESDLTQVDAVVHSINPQGFFAHAGPLRLFVSAHLIP 119

Query: 466 DDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           +D+++     P   T++    I+  + VR+KIIGTR
Sbjct: 120 NDVKWDPNATPPQFTNNEDTVIEPQTHVRVKIIGTR 155

[84][TOP]
>UniRef100_Q753Q2 AFR402Cp n=1 Tax=Eremothecium gossypii RepID=Q753Q2_ASHGO
          Length = 171

 Score =  129 bits (324), Expect = 2e-28
 Identities = 67/153 (43%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIG--KGL 297
           MFF   L  N+ LHP YFG  +R+ L +KL+++VEGTC+G+ G+++ V   ENI   +G 
Sbjct: 1   MFFFKDLSLNITLHPSYFGPRMREYLKTKLLQEVEGTCTGKFGYILCVLDSENIEIERGR 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 477
           I    G   F VKY+ VV++PFKGE+++ +V+    +GF  + GP+ +FVS  L+P+D+ 
Sbjct: 61  ILPTDGSAEFTVKYRAVVWKPFKGEVVDGIVSSCTNLGFEVDVGPLSVFVSPFLMPEDLT 120

Query: 478 FQSG-DMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           F SG + P+Y +S+    I K S VRLKI+G R
Sbjct: 121 FNSGSNPPSYQSSEQI--ITKGSRVRLKIVGAR 151

[85][TOP]
>UniRef100_A8Q628 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
           7966 RepID=A8Q628_MALGO
          Length = 186

 Score =  129 bits (324), Expect = 2e-28
 Identities = 67/166 (40%), Positives = 98/166 (59%), Gaps = 16/166 (9%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRH----------------GF 255
           MFF   L+   +LHP +FG ++ + L  KL  DVEGTCSG +                G+
Sbjct: 1   MFFLKTLDHRTELHPSFFGPSMIEFLNRKLRDDVEGTCSGVYVRTYKSMRLMLILESQGY 60

Query: 256 VVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPV 435
           ++ V  + ++G+G +  GTG   F  +YQ +V +PF GE+++A +T VNKMGFFAE GP+
Sbjct: 61  IIKVVSVLDVGQGKVMPGTGLAEFRSRYQAIVLKPFNGEVVDAKITNVNKMGFFAEVGPL 120

Query: 436 QIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            IFVS+HL+P D +F     P   TS  +  + K   VR++I+GTR
Sbjct: 121 SIFVSSHLLPIDYKFHPDSNPPEFTSP-TDSLVKGRRVRVRIVGTR 165

[86][TOP]
>UniRef100_Q6CU89 KLLA0C06787p n=1 Tax=Kluyveromyces lactis RepID=Q6CU89_KLULA
          Length = 171

 Score =  129 bits (323), Expect = 2e-28
 Identities = 67/153 (43%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIG--KGL 297
           MFF   L  N+ LHP +FG  ++  L++KL+++VEGTC+G+ G+++ V   ENI   +G 
Sbjct: 1   MFFFKDLSLNITLHPSFFGPQMKRYLMTKLLQEVEGTCTGKFGYILCVLDCENIEIERGR 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 477
           I    G   F VKY+ VV++PFKGE+L+ +V+    +GF  E GP+ +FVS  L+P+D+ 
Sbjct: 61  ILPTDGSAEFTVKYRAVVWKPFKGEVLDGIVSSCTNLGFEVEVGPLSVFVSPFLMPEDLT 120

Query: 478 FQSG-DMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           F SG + P+Y +S+    I K S VRLKI+G R
Sbjct: 121 FNSGSNPPSYQSSEQI--ITKGSRVRLKIVGAR 151

[87][TOP]
>UniRef100_C5DLR8 KLTH0G02926p n=1 Tax=Lachancea thermotolerans CBS 6340
           RepID=C5DLR8_LACTC
          Length = 171

 Score =  128 bits (322), Expect = 3e-28
 Identities = 66/153 (43%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIEN--IGKGL 297
           MFF   L  N+ LHP +FG  ++  L +KL+++VEGTC+G+ G+++ V   EN  I +G 
Sbjct: 1   MFFFKDLSLNITLHPSFFGPQMKQYLRTKLLQEVEGTCTGKFGYILCVLDCENVEIERGR 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 477
           I  G G   F VKY+ VV++PFKGE+++ VV+    +GF  + GP+ +FVS  L+P+D+ 
Sbjct: 61  ILPGDGSAEFTVKYRAVVWKPFKGEVVDGVVSSCTNLGFEVDVGPLSVFVSPFLMPEDLS 120

Query: 478 FQSG-DMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           + SG + P+Y +S+    I K S VRLKI+G R
Sbjct: 121 YNSGSNPPSYQSSEQI--ITKGSRVRLKIVGAR 151

[88][TOP]
>UniRef100_C5GU02 RNA polymerase II subunit 7 n=1 Tax=Ajellomyces dermatitidis ER-3
           RepID=C5GU02_AJEDR
          Length = 169

 Score =  127 bits (318), Expect = 8e-28
 Identities = 59/150 (39%), Positives = 95/150 (63%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LE  + LHP +FG ++++ L  KL+ DVEG C+G + ++V V    +I +G + 
Sbjct: 1   MFFIHFLEHVLTLHPTFFGSHVKEYLTQKLLDDVEGVCTGDY-YIVCVMDTYDISEGRVL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   + + Y+ +V++PFKGE ++A+VT V   G FAE GP+ +FVS HLIP ++++ 
Sbjct: 60  PGSGLAEYTIMYRAIVWKPFKGETVDAIVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P   T +G   I+K + +R+K+IG R
Sbjct: 120 PDATPPQYTDNGEQVIEKGTNLRIKLIGLR 149

[89][TOP]
>UniRef100_C1H1N2 DNA-directed RNA polymerase II subunit RPB7 n=1
           Tax=Paracoccidioides brasiliensis Pb01
           RepID=C1H1N2_PARBA
          Length = 202

 Score =  127 bits (318), Expect = 8e-28
 Identities = 60/150 (40%), Positives = 95/150 (63%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LE  + LHP +FG ++++ L  KL+ DVEG C+G + ++V V    +I +G + 
Sbjct: 1   MFFIHFLEHVLTLHPTFFGSHVKEYLTQKLLDDVEGVCTGDY-YIVCVMDTYDISEGRVI 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   + + Y+ +V++PFKGE ++AVVT V   G FAE GP+ +FVS HLIP ++++ 
Sbjct: 60  PGSGLAEYTIMYRAIVWKPFKGETVDAVVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P   T +G   I+K + +R+K+IG R
Sbjct: 120 PDATPPQYTDNGEQVIEKGTNLRIKLIGLR 149

[90][TOP]
>UniRef100_C1G5V3 RNA polymerase II subunit 7 n=1 Tax=Paracoccidioides brasiliensis
           Pb18 RepID=C1G5V3_PARBD
          Length = 169

 Score =  127 bits (318), Expect = 8e-28
 Identities = 60/150 (40%), Positives = 95/150 (63%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LE  + LHP +FG ++++ L  KL+ DVEG C+G + ++V V    +I +G + 
Sbjct: 1   MFFIHFLEHVLTLHPTFFGSHVKEYLTQKLLDDVEGVCTGDY-YIVCVMDTYDISEGRVI 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   + + Y+ +V++PFKGE ++AVVT V   G FAE GP+ +FVS HLIP ++++ 
Sbjct: 60  PGSGLAEYTIMYRAIVWKPFKGETVDAVVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P   T +G   I+K + +R+K+IG R
Sbjct: 120 PDATPPQYTDNGEQVIEKGTNLRIKLIGLR 149

[91][TOP]
>UniRef100_C0RXK4 RNA polymerase II subunit 7 n=1 Tax=Paracoccidioides brasiliensis
           Pb03 RepID=C0RXK4_PARBP
          Length = 195

 Score =  127 bits (318), Expect = 8e-28
 Identities = 60/150 (40%), Positives = 95/150 (63%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LE  + LHP +FG ++++ L  KL+ DVEG C+G + ++V V    +I +G + 
Sbjct: 1   MFFIHFLEHVLTLHPTFFGSHVKEYLTQKLLDDVEGVCTGDY-YIVCVMDTYDISEGRVI 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   + + Y+ +V++PFKGE ++AVVT V   G FAE GP+ +FVS HLIP ++++ 
Sbjct: 60  PGSGLAEYTIMYRAIVWKPFKGETVDAVVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P   T +G   I+K + +R+K+IG R
Sbjct: 120 PDATPPQYTDNGEQVIEKGTNLRIKLIGLR 149

[92][TOP]
>UniRef100_C0NG73 RNA polymerase II subunit 7 n=3 Tax=Ajellomyces capsulatus
           RepID=C0NG73_AJECG
          Length = 169

 Score =  127 bits (318), Expect = 8e-28
 Identities = 59/150 (39%), Positives = 95/150 (63%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LE  + LHP +FG ++++ L  KL+ DVEG C+G + ++V V    +I +G + 
Sbjct: 1   MFFIHFLEHVLTLHPTFFGSHVKEYLTQKLLDDVEGVCTGDY-YIVCVMDTYDISEGRVL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   + + Y+ +V++PFKGE ++A+VT V   G FAE GP+ +FVS HLIP ++++ 
Sbjct: 60  PGSGLAEYTIMYRAIVWKPFKGETVDAIVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P   T +G   I+K + +R+K+IG R
Sbjct: 120 PDATPPQYTDNGEQVIEKGTNLRIKLIGLR 149

[93][TOP]
>UniRef100_C5FWU0 DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Microsporum
           canis CBS 113480 RepID=C5FWU0_NANOT
          Length = 169

 Score =  125 bits (313), Expect = 3e-27
 Identities = 59/150 (39%), Positives = 95/150 (63%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LE  + LHP +FG ++++ L  KL+ DVEG C+G + ++V V  + +I +G I 
Sbjct: 1   MFFIHFLEHVLTLHPSFFGSHVKEYLTQKLLDDVEGVCTGDY-YIVCVMDMYDISEGKII 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   + + Y+ +V++PFKGE ++A+VT V   G FAE GP+ +FVS HLIP ++++ 
Sbjct: 60  PGSGLAEYTIVYRAIVWKPFKGETVDAIVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P   T +    I+K + +R+K+IG R
Sbjct: 120 PDATPPQYTDNADQVIEKGTNLRIKLIGLR 149

[94][TOP]
>UniRef100_Q1DZF6 Putative uncharacterized protein n=1 Tax=Coccidioides immitis
           RepID=Q1DZF6_COCIM
          Length = 180

 Score =  124 bits (311), Expect = 5e-27
 Identities = 59/150 (39%), Positives = 94/150 (62%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LE  + LHP +FG ++++ L  KL+ DVEG C+G + ++V V    +I +G I 
Sbjct: 1   MFFIHFLEHVLTLHPSFFGSHVKEYLTQKLLDDVEGICTGDY-YIVCVMDTYDISEGRII 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   + + Y+ +V++PFKGE ++A+VT V   G FAE GP+ +FVS HLIP ++++ 
Sbjct: 60  PGSGMAEYTIMYRAIVWKPFKGETVDAIVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P   T +    I+K + +R+K+IG R
Sbjct: 120 PDATPPQYTDNADQVIEKGTNLRIKLIGLR 149

[95][TOP]
>UniRef100_C5P090 DNA-directed RNA polymerase II, putative n=1 Tax=Coccidioides
           posadasii C735 delta SOWgp RepID=C5P090_COCP7
          Length = 169

 Score =  124 bits (311), Expect = 5e-27
 Identities = 59/150 (39%), Positives = 94/150 (62%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LE  + LHP +FG ++++ L  KL+ DVEG C+G + ++V V    +I +G I 
Sbjct: 1   MFFIHFLEHVLTLHPSFFGSHVKEYLTQKLLDDVEGICTGDY-YIVCVMDTYDISEGRII 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   + + Y+ +V++PFKGE ++A+VT V   G FAE GP+ +FVS HLIP ++++ 
Sbjct: 60  PGSGMAEYTIMYRAIVWKPFKGETVDAIVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P   T +    I+K + +R+K+IG R
Sbjct: 120 PDATPPQYTDNADQVIEKGTNLRIKLIGLR 149

[96][TOP]
>UniRef100_C5JP31 RNA polymerase II subunit 7 n=1 Tax=Ajellomyces dermatitidis
           SLH14081 RepID=C5JP31_AJEDS
          Length = 169

 Score =  124 bits (310), Expect = 7e-27
 Identities = 58/150 (38%), Positives = 94/150 (62%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LE  + LHP +FG ++++ L  KL+ DVEG C+G + ++V V    +I +G + 
Sbjct: 1   MFFIHFLEHVLTLHPTFFGSHVKEYLTQKLLDDVEGVCTGDY-YIVCVMDTYDISEGRVL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   + + Y+ +V++PFKGE ++A+VT V   G FAE G + +FVS HLIP ++++ 
Sbjct: 60  PGSGLAEYTIMYRAIVWKPFKGETVDAIVTSVKNQGIFAEVGQLTVFVSKHLIPPEIKWD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P   T +G   I+K + +R+K+IG R
Sbjct: 120 PDATPPQYTDNGEQVIEKGTNLRIKLIGLR 149

[97][TOP]
>UniRef100_C4Y643 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
           42720 RepID=C4Y643_CLAL4
          Length = 141

 Score =  122 bits (307), Expect = 1e-26
 Identities = 63/120 (52%), Positives = 86/120 (71%), Gaps = 3/120 (2%)
 Frame = +1

Query: 223 VEGTCSGRHGFVVAVTGIENI--GKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTM 396
           ++GTC+G+ G++V V    NI  G+G I  G+G   F VKY+ VV++PFKGE+++AVVT 
Sbjct: 2   LKGTCTGQFGYIVCVLDCMNIDVGRGRIIPGSGMAEFEVKYRAVVWKPFKGEVVDAVVTT 61

Query: 397 VNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           VNKMGFFA+ GP+ +FVS HLI  DM+F  S + P Y + D +  I+K S VRLKI+GTR
Sbjct: 62  VNKMGFFADVGPLSVFVSTHLISSDMKFNPSANPPAYVSPDET--IEKGSRVRLKIVGTR 119

[98][TOP]
>UniRef100_A9BK44 Rpb7 n=1 Tax=Cryptophyta RepID=A9BK44_9CRYP
          Length = 175

 Score =  119 bits (299), Expect = 1e-25
 Identities = 60/151 (39%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI-GKGLI 300
           MFF   L +N+ +  +YF +N++ NLVS L+ +VEG+ +G  G +V +T I N  GKG +
Sbjct: 1   MFFITTLNQNIYISAKYFKKNIKKNLVSTLLGNVEGSYAGPFGNIVIITEICNKWGKGKL 60

Query: 301 RDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 480
             GT    F V ++ + FRPFKGE+ ++++T +  +GFF+EAG +QIFVS + +P+D ++
Sbjct: 61  IIGTPSAMFNVTFRAITFRPFKGEVFDSIITNLTNVGFFSEAGALQIFVSKNQLPNDFQY 120

Query: 481 QSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
              D   + T     K  KDS +R+KII  +
Sbjct: 121 NGKDKVFFNTMSPEEKFCKDSLIRIKIISVK 151

[99][TOP]
>UniRef100_A7AQQ9 DNA-directed RNA polymerase II, putative n=1 Tax=Babesia bovis
           RepID=A7AQQ9_BABBO
          Length = 175

 Score =  119 bits (298), Expect = 2e-25
 Identities = 61/150 (40%), Positives = 92/150 (61%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M+F +   + + + P   G + + N+   L   VEG CS ++G+VV V  I     G ++
Sbjct: 1   MYFVVEQWKIINVKPSQLGPSYQQNIEEMLRNQVEGHCSSKYGYVVCVIRIIQNEVGRVQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           DGTG +   VKYQ +VF+PFK E+L+A+VT VNK+GFFA+AGP++ FVS   I     + 
Sbjct: 61  DGTGMIVVNVKYQAIVFKPFKDEVLDAIVTDVNKLGFFAQAGPLKAFVSRTAIQPSFVYD 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           S D  N   +DG++ I+  +EVR++I G R
Sbjct: 121 S-DAANPCYTDGTISIKPQTEVRMRIQGIR 149

[100][TOP]
>UniRef100_A1DBD6 RNA polymerase II subunit 7 n=1 Tax=Neosartorya fischeri NRRL 181
           RepID=A1DBD6_NEOFI
          Length = 167

 Score =  118 bits (296), Expect = 3e-25
 Identities = 54/150 (36%), Positives = 95/150 (63%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF     + + LHP YFG N+R+ L+++L ++ EG C+G H FV+ V  + +IG+G + 
Sbjct: 1   MFFLKEETKVISLHPSYFGPNMREYLINRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   + +KY+ ++++PF+GE ++A+VT V   G F  AGP+ +F++   IP D++++
Sbjct: 60  PGSGQAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWE 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
              +P   T      I+K + +RLKI+G +
Sbjct: 120 PNTVPPQYTDHADQVIEKGTSLRLKILGVK 149

[101][TOP]
>UniRef100_A1C471 RNA polymerase II subunit 7 n=1 Tax=Aspergillus clavatus
           RepID=A1C471_ASPCL
          Length = 169

 Score =  118 bits (296), Expect = 3e-25
 Identities = 54/150 (36%), Positives = 95/150 (63%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF     + + LHP YFG N+R+ L+++L ++ EG C+G H FV+ V  + +IG+G + 
Sbjct: 1   MFFLKEETKVISLHPSYFGPNVREYLINRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   + +KY+ ++++PF+GE ++A+VT V   G F  AGP+ +F++   IP D++++
Sbjct: 60  PGSGSAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWE 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
              +P   T      I+K + +RLKI+G +
Sbjct: 120 PNTVPPQYTDHADQVIEKGTSLRLKILGVK 149

[102][TOP]
>UniRef100_P34087 DNA-directed RNA polymerase II subunit RPB7 n=5 Tax=Saccharomyces
           cerevisiae RepID=RPB7_YEAST
          Length = 171

 Score =  118 bits (296), Expect = 3e-25
 Identities = 59/151 (39%), Positives = 98/151 (64%), Gaps = 3/151 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIG--KGL 297
           MFF   L  N+ LHP +FG  ++  L +KL+++VEG+C+G+ G+++ V   +NI   +G 
Sbjct: 1   MFFIKDLSLNITLHPSFFGPRMKQYLKTKLLEEVEGSCTGKFGYILCVLDYDNIDIQRGR 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 477
           I    G   F VKY+ VVF+PFKGE+++  V   ++ GF  + GP+++FV+ HL+P D+ 
Sbjct: 61  ILPTDGSAEFNVKYRAVVFKPFKGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPQDLT 120

Query: 478 FQSG-DMPNYTTSDGSVKIQKDSEVRLKIIG 567
           F +G + P+Y +S+  + I+  S +R+KI G
Sbjct: 121 FNAGSNPPSYQSSEDVITIK--SRIRVKIEG 149

[103][TOP]
>UniRef100_C5DW41 ZYRO0D11726p n=1 Tax=Zygosaccharomyces rouxii CBS 732
           RepID=C5DW41_ZYGRC
          Length = 171

 Score =  118 bits (295), Expect = 4e-25
 Identities = 58/151 (38%), Positives = 98/151 (64%), Gaps = 3/151 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIG--KGL 297
           MFF   L  N+ LHP YFG  ++D L +KL+++VEG+C+G+ G+++ V   + I   +G 
Sbjct: 1   MFFIKDLSLNITLHPSYFGPRMKDFLKTKLLQEVEGSCTGKFGYILCVLDYDRIDIERGR 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 477
           I    G   F V+Y+ +VF+PFKGE+++  V   ++ GF  + GP+++FV+ HL+P D+ 
Sbjct: 61  ILPTDGSAEFTVRYRAIVFKPFKGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPQDLM 120

Query: 478 FQSG-DMPNYTTSDGSVKIQKDSEVRLKIIG 567
           F +G + P+Y +S+  + I+  S +R+KI G
Sbjct: 121 FNAGSNPPSYQSSEDVITIK--SRIRVKIEG 149

[104][TOP]
>UniRef100_A2R8K1 Complex: in S. pombe the DNA-dependent RNA-polymerase II consists
           of 11 subunits n=1 Tax=Aspergillus niger CBS 513.88
           RepID=A2R8K1_ASPNC
          Length = 167

 Score =  117 bits (294), Expect = 5e-25
 Identities = 54/150 (36%), Positives = 95/150 (63%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF     + + LHP YFG N+R+ L+++L ++ EG C+G H FV+ V  + +IG+G + 
Sbjct: 1   MFFLKEEVKVITLHPSYFGPNMREYLINRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   + +KY+ ++++PF+GE ++A+VT V   G F  AGP+ +F++   IP D++++
Sbjct: 60  PGSGQAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWE 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
              +P   T      I+K + +RLKI+G +
Sbjct: 120 PNTVPPQYTDHADQVIEKGTSLRLKILGVK 149

[105][TOP]
>UniRef100_Q6FUK8 Strain CBS138 chromosome F complete sequence n=1 Tax=Candida
           glabrata RepID=Q6FUK8_CANGA
          Length = 171

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/151 (38%), Positives = 98/151 (64%), Gaps = 3/151 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIG--KGL 297
           MFF   L  N+ LHP +FG  ++  + +KL+++VEG+C+G+ G+++ V   +NI   +G 
Sbjct: 1   MFFIKDLSLNVTLHPSFFGPRMKQYIKTKLLQEVEGSCTGKFGYILCVLDYDNIEIERGR 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 477
           I    G   F VKY+ VVF+PFKGE+++  V   ++ GF  + GP+++FV+ HL+P D+ 
Sbjct: 61  ILPTDGSAEFNVKYRAVVFKPFKGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPQDLT 120

Query: 478 FQSG-DMPNYTTSDGSVKIQKDSEVRLKIIG 567
           F +G + P+Y +S+  + I+  S +R+KI G
Sbjct: 121 FNAGSNPPSYQSSEDIITIK--SRIRVKIEG 149

[106][TOP]
>UniRef100_Q8IJC9 DNA-directed RNA polymerase II, putative n=1 Tax=Plasmodium
           falciparum 3D7 RepID=Q8IJC9_PLAF7
          Length = 177

 Score =  117 bits (292), Expect = 8e-25
 Identities = 61/150 (40%), Positives = 91/150 (60%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M+F I   +N+ + P   G   +  +   L   VEG CS ++G+V+ V  I +   G ++
Sbjct: 1   MYFVIEEWKNVIIKPSQLGPRYQQYIEDMLRNSVEGQCSVKYGYVICVIRIIHSEPGRVQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           DGTG +   VKYQ +VF+PFK E+L+A+VT VNK+GFFA+AGP++IF+S   IP   E+ 
Sbjct: 61  DGTGMIVVKVKYQAIVFKPFKDEVLDAIVTDVNKLGFFAQAGPLKIFISRTAIPKYFEY- 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           S D+     S G   I+  + VR+K+ G R
Sbjct: 120 SEDLHYPCFSSGDYNIKPQTTVRIKLQGIR 149

[107][TOP]
>UniRef100_Q4N989 DNA-directed RNA polymerase II subunit Rpb7, putative n=2
           Tax=Theileria RepID=Q4N989_THEPA
          Length = 175

 Score =  117 bits (292), Expect = 8e-25
 Identities = 60/150 (40%), Positives = 92/150 (61%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M+F +   + + L P   G N + N+   L   VEG C+ ++G+VV V  I     G ++
Sbjct: 1   MYFVVEQWKLINLKPCQLGPNYQQNIEEMLRDQVEGHCTNKYGYVVCVIRIVQNDMGRVQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           DGT  +   VKYQ +VF+PFK E+L+A+VT VNK+GFFA+AGP++ FVS + I  +  + 
Sbjct: 61  DGTAMIVVNVKYQAIVFKPFKDEVLDAIVTDVNKLGFFAQAGPLKAFVSRNSIHPNFVYD 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           S D      SDG++ I+  SEVR+++ G +
Sbjct: 121 S-DSAYPCYSDGTISIKPQSEVRMRLQGIK 149

[108][TOP]
>UniRef100_B8MQK6 RNA polymerase II subunit 7 n=1 Tax=Talaromyces stipitatus ATCC
           10500 RepID=B8MQK6_TALSN
          Length = 169

 Score =  117 bits (292), Expect = 8e-25
 Identities = 53/150 (35%), Positives = 96/150 (64%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF     + + LHP +FG N+++ LV++L ++ EG C+G H FV+ V  + +IG+G + 
Sbjct: 1   MFFLKEETKVVTLHPSFFGPNVKEYLVNRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVI 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   + +KY+ ++++PF+GE ++A+VT V   G F  AGP+ +F++   IP D++++
Sbjct: 60  PGSGHAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWE 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            G +P   T      I++ + +RLKI+G +
Sbjct: 120 PGTVPPQYTDHADQVIERGTSLRLKILGVK 149

[109][TOP]
>UniRef100_B9PI55 DNA-directed RNA polymerase II 19 kDa polypeptide, putative n=2
           Tax=Toxoplasma gondii RepID=B9PI55_TOXGO
          Length = 207

 Score =  116 bits (290), Expect = 1e-24
 Identities = 56/150 (37%), Positives = 89/150 (59%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF +    N+ L P   GR     + + L + VEG C    G+++ V  I ++  G ++
Sbjct: 1   MFFVVEQWHNVALRPAQLGRRYTQYVETLLRQQVEGKCLHNLGYIICVIRIVHMEAGRVQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           DGTG V    +YQ + F+PFK E+L+AV+T VNK+G FA+ GP+++FVS   +P    +Q
Sbjct: 61  DGTGMVIVAARYQAIAFKPFKDEVLDAVITDVNKLGLFAQCGPLKVFVSRASLPPSFVYQ 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
                   T DG V+++ DS++RL+++G R
Sbjct: 121 DDSAVGCMT-DGEVELRVDSDIRLRLLGVR 149

[110][TOP]
>UniRef100_B6KD73 DNA-directed RNA polymerase II subunit RPB7, putative n=1
           Tax=Toxoplasma gondii ME49 RepID=B6KD73_TOXGO
          Length = 207

 Score =  116 bits (290), Expect = 1e-24
 Identities = 56/150 (37%), Positives = 89/150 (59%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF +    N+ L P   GR     + + L + VEG C    G+++ V  I ++  G ++
Sbjct: 1   MFFVVEQWHNVALRPAQLGRRYTQYVETLLRQQVEGKCLHNLGYIICVIRIVHMEAGRVQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           DGTG V    +YQ + F+PFK E+L+AV+T VNK+G FA+ GP+++FVS   +P    +Q
Sbjct: 61  DGTGMVIVAARYQAIAFKPFKDEVLDAVITDVNKLGLFAQCGPLKVFVSRASLPPSFVYQ 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
                   T DG V+++ DS++RL+++G R
Sbjct: 121 DDSAVGCMT-DGEVELRVDSDIRLRLLGVR 149

[111][TOP]
>UniRef100_Q0CNG9 DNA-directed RNA polymerase II 19 kDa polypeptide n=1
           Tax=Aspergillus terreus NIH2624 RepID=Q0CNG9_ASPTN
          Length = 174

 Score =  116 bits (290), Expect = 1e-24
 Identities = 53/150 (35%), Positives = 94/150 (62%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF     + + LHP YFG N+R+ L+++L ++ EG C+G H FV+ V  + +IG+G + 
Sbjct: 1   MFFLKEETKVISLHPSYFGPNVREYLINRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
             +G   + +KY+ ++++PF+GE ++A+VT V   G F  AGP+ +F++   IP D++++
Sbjct: 60  PSSGHAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLAVFIARKNIPSDIKWE 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
              +P   T      I+K + +RLKI+G +
Sbjct: 120 PNTVPPQYTDHADQVIEKGTSLRLKILGVK 149

[112][TOP]
>UniRef100_C8VMQ5 RNA polymerase II subunit 7 (AFU_orthologue; AFUA_8G05300) n=2
           Tax=Emericella nidulans RepID=C8VMQ5_EMENI
          Length = 169

 Score =  116 bits (290), Expect = 1e-24
 Identities = 54/150 (36%), Positives = 93/150 (62%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF     + + LHP YFG N+R+ L+++L ++ EG C+G H FV+ V  + +IG+G + 
Sbjct: 1   MFFLKEETKVITLHPSYFGPNVREYLINRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G G   + +KY+ ++++PF+GE ++A+VT V   G F  AGP+ +F++   IP D+ ++
Sbjct: 60  PGNGQAEYTIKYRAIIWKPFRGETVDALVTSVKPTGIFTLAGPLSVFIARKNIPSDIRWE 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
              +P   T      I+K + +RLKI+G +
Sbjct: 120 PNTVPPQYTDHADQVIEKGTSLRLKILGVK 149

[113][TOP]
>UniRef100_B6QUL0 RNA polymerase II subunit 7 n=1 Tax=Penicillium marneffei ATCC
           18224 RepID=B6QUL0_PENMQ
          Length = 169

 Score =  115 bits (289), Expect = 2e-24
 Identities = 52/150 (34%), Positives = 95/150 (63%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF     + + LHP +FG N+++ L+++L ++ EG C+G H FV+ V  + +IG G + 
Sbjct: 1   MFFLKEETKVVTLHPSFFGPNVKEYLINRLNEEEEGRCTGDH-FVICVMDMVDIGDGRVI 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   + +KY+ ++++PF+GE ++A+VT V   G F  AGP+ +F++   IP D++++
Sbjct: 60  PGSGHAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWE 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            G +P   T      I++ + +RLKI+G +
Sbjct: 120 PGTVPPQYTDHADQVIERGTSLRLKILGVK 149

[114][TOP]
>UniRef100_B6H0W8 Pc12g03390 protein n=1 Tax=Penicillium chrysogenum Wisconsin
           54-1255 RepID=B6H0W8_PENCW
          Length = 167

 Score =  115 bits (289), Expect = 2e-24
 Identities = 52/150 (34%), Positives = 93/150 (62%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF     + + +HP YFG N+R+ L+ +L ++ EG C+G H FV+ V  + +IG+G + 
Sbjct: 1   MFFLKEETKVISMHPSYFGPNMREYLIGRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVM 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G G   + ++Y+ ++++PF+GE ++A+VT V   G F  AGP+ +F++   IP D++++
Sbjct: 60  PGIGQAEYTIRYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWE 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
              +P   T      I+K + +RLKI+G +
Sbjct: 120 PNTVPPQYTDHADQVIEKGTSLRLKILGVK 149

[115][TOP]
>UniRef100_Q2US04 DNA-directed RNA polymerase subunit E' n=1 Tax=Aspergillus oryzae
           RepID=Q2US04_ASPOR
          Length = 169

 Score =  115 bits (288), Expect = 2e-24
 Identities = 53/150 (35%), Positives = 94/150 (62%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF     + + LHP YFG N+R+ L+++L ++ EG C+G H FV+ V  + +IG+G + 
Sbjct: 1   MFFLKEETKVITLHPSYFGPNVREYLINRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
             +G   + +KY+ ++++PF+GE ++A+VT V   G F  AGP+ +F++   IP D++++
Sbjct: 60  PSSGQAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWE 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
              +P   T      I+K + +RLKI+G +
Sbjct: 120 PNTVPPQYTDHADQVIEKGTSLRLKILGVK 149

[116][TOP]
>UniRef100_B8MXT0 RNA polymerase II subunit 7 n=1 Tax=Aspergillus flavus NRRL3357
           RepID=B8MXT0_ASPFN
          Length = 191

 Score =  115 bits (288), Expect = 2e-24
 Identities = 53/150 (35%), Positives = 94/150 (62%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF     + + LHP YFG N+R+ L+++L ++ EG C+G H FV+ V  + +IG+G + 
Sbjct: 1   MFFLKEETKVITLHPSYFGPNVREYLINRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
             +G   + +KY+ ++++PF+GE ++A+VT V   G F  AGP+ +F++   IP D++++
Sbjct: 60  PSSGQAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWE 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
              +P   T      I+K + +RLKI+G +
Sbjct: 120 PNTVPPQYTDHADQVIEKGTSLRLKILGVK 149

[117][TOP]
>UniRef100_Q4XDG5 DNA-directed RNA polymerase II, putative n=2 Tax=Plasmodium
           (Vinckeia) RepID=Q4XDG5_PLACH
          Length = 177

 Score =  115 bits (287), Expect = 3e-24
 Identities = 59/150 (39%), Positives = 91/150 (60%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M+F I   +N+ + P   G   +  +   L   +EG C+ ++G+++ V  I +   G ++
Sbjct: 1   MYFVIEEWKNVIIKPSQLGPKYQQYIEDMLRNSIEGQCTEKYGYIICVIRIMHSEPGRVQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           DGTG +   VKYQ +VF+PFK E+L+A+VT VNK+GFFA+AGP++IF+S   IP   E+ 
Sbjct: 61  DGTGMIVVKVKYQAIVFKPFKDEVLDAIVTDVNKLGFFAQAGPLKIFISRTAIPKYFEY- 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           + D      S GS  I+  + VRLK+ G R
Sbjct: 120 TEDAHYPCFSSGSHNIKPQTTVRLKLQGIR 149

[118][TOP]
>UniRef100_A7TTM8 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
           DSM 70294 RepID=A7TTM8_VANPO
          Length = 171

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/151 (37%), Positives = 97/151 (64%), Gaps = 3/151 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIG--KGL 297
           MFF   L  N+ LHP +FG  ++  L +KL+++VEG+C+G+ G+++ V   + I   +G 
Sbjct: 1   MFFIKDLSLNITLHPSFFGPRMKQYLKTKLLQEVEGSCTGKFGYILCVLDYDKIEIERGR 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 477
           I    G   F VKY+ +VF+PFKGE+++  V   ++ GF  + GP+++FV+ HL+P D+ 
Sbjct: 61  ILPTDGSAEFTVKYRAIVFKPFKGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPQDLI 120

Query: 478 FQSG-DMPNYTTSDGSVKIQKDSEVRLKIIG 567
           F +G + P+Y +S+  + I+  S +R+KI G
Sbjct: 121 FNAGSNPPSYQSSEDVITIK--SRIRVKIEG 149

[119][TOP]
>UniRef100_Q7SH68 DNA-directed RNA polymerase II 19 kDa polypeptide n=1
           Tax=Neurospora crassa RepID=Q7SH68_NEUCR
          Length = 150

 Score =  114 bits (286), Expect = 4e-24
 Identities = 53/129 (41%), Positives = 87/129 (67%)
 Frame = +1

Query: 187 LRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFK 366
           + + + +KL+KDVEGTC+G + +++A+    ++ +G I  G G   F VKY+ VV+RPFK
Sbjct: 1   MHELVTTKLVKDVEGTCAGDY-YIIAIMDAFDVSEGRILPGNGLAEFTVKYRAVVWRPFK 59

Query: 367 GEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKIQKDSE 546
           GE+++A+V  +N  GFF +AGP+ IFVS+HL+P+++ F     P   T++  + I+  + 
Sbjct: 60  GEVVDAIVFSINPHGFFCQAGPLSIFVSSHLMPEEIHFDPNATPPQFTNNADMVIEPGTH 119

Query: 547 VRLKIIGTR 573
           VR+KI G R
Sbjct: 120 VRVKIGGLR 128

[120][TOP]
>UniRef100_B2WC37 DNA-directed RNA polymerase II 19 kDa polypeptide n=1
           Tax=Pyrenophora tritici-repentis Pt-1C-BFP
           RepID=B2WC37_PYRTR
          Length = 171

 Score =  114 bits (285), Expect = 5e-24
 Identities = 56/150 (37%), Positives = 91/150 (60%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LE+ +QLHP YFG  +R ++  +L++  EG+ +G++  V  +   + I  G + 
Sbjct: 1   MFFLKELEKTIQLHPSYFGPLIRQHIHRELLQKEEGSSTGKYTIVCILDSFD-ISDGKVM 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            GTG   + V Y+ VV+RP+KGE+++ +VT V + GFF + G +Q FV   +IP +++F 
Sbjct: 60  PGTGSAEYVVHYKAVVWRPYKGEVMDGIVTSVLRTGFFVDCGSLQAFVGRSMIPAEIKFD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           +   P   T DG   I+K + +R+KI G R
Sbjct: 120 ANATPPQWTDDGEQVIEKGTNIRIKIKGLR 149

[121][TOP]
>UniRef100_B3L236 Dna-directed rna polymerase ii, putative n=1 Tax=Plasmodium
           knowlesi strain H RepID=B3L236_PLAKH
          Length = 177

 Score =  112 bits (281), Expect = 2e-23
 Identities = 59/150 (39%), Positives = 89/150 (59%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M+F I   +N+ + P   G   +  +   L   VEG C+ ++G+++ V  I +   G ++
Sbjct: 1   MYFVIEEWKNVIIKPSQLGPRYQQFIEDMLRNSVEGQCNAKYGYIICVIRIIHCEPGRVQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           DGT  +   VKYQ +VF+PFK E+L+AVVT VNK+GFFA+AGP++IF+S   IP   E+ 
Sbjct: 61  DGTSMIVVKVKYQAIVFKPFKDEVLDAVVTDVNKLGFFAQAGPLKIFISRTAIPKYFEY- 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           S D      S G   I+  + VR+K+ G R
Sbjct: 120 SEDSHYPCFSSGVYNIKPQTTVRIKLQGIR 149

[122][TOP]
>UniRef100_A5KE18 DNA-directed RNA polymerase II, putative n=1 Tax=Plasmodium vivax
           RepID=A5KE18_PLAVI
          Length = 177

 Score =  111 bits (278), Expect = 3e-23
 Identities = 59/150 (39%), Positives = 89/150 (59%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M+F I   +N+ + P   G   +  +   L   VEG C+ ++G+++ V  I +   G ++
Sbjct: 1   MYFVIEEWKNVIIKPSQLGPRYQQFIEDMLRNSVEGQCNAKYGYIICVIRIIHSEPGRVQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           DGT  +   VKYQ +VF+PFK E+L+AVVT VNK+GFFA+AGP++IF+S   IP   E+ 
Sbjct: 61  DGTSMIVVKVKYQAIVFKPFKDEVLDAVVTDVNKLGFFAQAGPLKIFISRTAIPKFFEY- 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           S D      S G   I+  + VR+K+ G R
Sbjct: 120 SEDSHYPCFSSGVHNIKPQTTVRIKLQGIR 149

[123][TOP]
>UniRef100_B8C460 19kDa subunit of RNA polymerase n=1 Tax=Thalassiosira pseudonana
           CCMP1335 RepID=B8C460_THAPS
          Length = 183

 Score =  109 bits (273), Expect = 1e-22
 Identities = 62/151 (41%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGI--ENIGKGL 297
           MF+   LE  ++L P +FG+ LR  +V  L ++VEG     +GFVV V  +  E I  G+
Sbjct: 1   MFYVKTLEHEIELEPIHFGQKLRATIVRLLKEEVEGLALANYGFVVNVIEVPEEQIRSGI 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDM- 474
           I   TG V F VKY  ++ RPF  E+++A V   N++GFFA  GP++IFVS H +P+DM 
Sbjct: 61  IEYDTGNVVFYVKYTALLLRPFINEVVDATVAQCNELGFFAYVGPLRIFVSKHSMPEDMF 120

Query: 475 EFQSGDMPNYTTSDGSVKIQKDSEVRLKIIG 567
               G+  ++ + D  V I     VRLKI G
Sbjct: 121 NGFDGERDSWVSDDKEVVIASGCGVRLKIKG 151

[124][TOP]
>UniRef100_A4RF02 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
           RepID=A4RF02_MAGGR
          Length = 172

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/150 (35%), Positives = 86/150 (57%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LER + LHP +FG+N+ + +V +L+ D EGTC G   ++++V    +I  G I 
Sbjct: 1   MFFLHNLERVVSLHPSFFGKNMHEIVVQRLLADTEGTCQGDF-YIISVMDAVDISPGKIV 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G     F V Y+ VV+RPFKG+ ++ +V  VN+ GFF   GP+++F++  + P D+ + 
Sbjct: 60  PGNAMAEFTVNYRAVVWRPFKGQTVDGIVDSVNQHGFFIAVGPLRVFITKQMCPPDVIYD 119

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           +   P   T   +  +   +  R +IIG R
Sbjct: 120 ANASPPVFTDKDTWLVDVGTLCRARIIGLR 149

[125][TOP]
>UniRef100_A9RP65 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RP65_PHYPA
          Length = 190

 Score =  105 bits (261), Expect = 3e-21
 Identities = 67/156 (42%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNL--RDNLVSKLMKDVEGT-CSGRHGFVVAVTGIENIGKG 294
           MFF + L R + + P+  G  L  R  ++ +L+KD +   CS  HGF V VT +E++  G
Sbjct: 1   MFFEVELRRLVVVEPQELGDELHTRRAMIRRLLKDFDAERCSEEHGFHVTVTTLEDVSPG 60

Query: 295 LIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDM 474
            IR GTG V F V ++C+VFRP + EILEA VT V + GF A  G  +IFV    + D  
Sbjct: 61  KIRSGTGSVIFWVTFKCIVFRPIRNEILEAEVTDVLERGFLAACGASRIFVPRKEM-DGF 119

Query: 475 EFQSGDMPNYT---TSDGSVKIQKDSEVRLKIIGTR 573
           EF+ G    Y     S GSV I+  S  RLK++GTR
Sbjct: 120 EFRPGASLEYNEWHDSSGSV-IKPKSMARLKVVGTR 154

[126][TOP]
>UniRef100_Q7RCA7 RNA polymerase II subunit 7 n=1 Tax=Plasmodium yoelii yoelii
           RepID=Q7RCA7_PLAYO
          Length = 193

 Score =  105 bits (261), Expect = 3e-21
 Identities = 59/166 (35%), Positives = 90/166 (54%), Gaps = 16/166 (9%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M+F I   +N+ + P   G   +  +   L   +EG C+ ++G+++ V  I +   G ++
Sbjct: 1   MYFVIEEWKNVIIKPSQLGPKYQQYIEDMLRNSIEGQCTEKYGYIICVIRIMHSEPGRVQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGE----------------ILEAVVTMVNKMGFFAEAGPV 435
           DGTG +   VKYQ +VF+PFK E                +L+A+VT VNK+GFFA+AGP+
Sbjct: 61  DGTGMIVVKVKYQAIVFKPFKDEVLFKINKLINKLIKSFVLDAIVTDVNKLGFFAQAGPL 120

Query: 436 QIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           +IF+S   IP   E+   D      S GS  I+  + VRLK+ G R
Sbjct: 121 KIFISRTAIPKYFEYNE-DAHYPCFSSGSHNIKPQTTVRLKLQGIR 165

[127][TOP]
>UniRef100_B7FYY8 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
           RepID=B7FYY8_PHATR
          Length = 181

 Score =  103 bits (258), Expect = 7e-21
 Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGI--ENIGKGL 297
           MF+   L+  + L P +FG  L+  +V  L + VEG     +G+VV V  +  + I  G+
Sbjct: 1   MFYVKTLDHEIVLEPVHFGPKLKATIVRLLKEHVEGLALANYGYVVNVIEVPEDQIRSGI 60

Query: 298 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDM- 474
           I   TG V F VKY  ++ RPF  E+L+AVVT  N +GFFA  GP++IFVS H +P+DM 
Sbjct: 61  IEYDTGNVVFTVKYTALLLRPFLNEVLDAVVTQCNALGFFAFCGPLRIFVSKHSMPEDMF 120

Query: 475 EFQSGDMPNYTTSDGSVKIQKDSEVRLKIIG 567
              + +   + + D  V I   S VRLKI G
Sbjct: 121 HGFNHEQDAWVSDDKEVVIAAGSGVRLKIKG 151

[128][TOP]
>UniRef100_Q0UVK5 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
           RepID=Q0UVK5_PHANO
          Length = 188

 Score =  102 bits (254), Expect = 2e-20
 Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 17/167 (10%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LE+ +QLHP YFG  +R ++  +L++  EG+ +G++  +V +    +I  G + 
Sbjct: 1   MFFLKELEKTIQLHPSYFGPLIRSHIHRELLQKEEGSSTGKYT-IVCILDAFDISDGKVL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFV------------ 447
            G+G   + V Y+ +V+RP+KGE+++ VVT V + GFF + G +Q FV            
Sbjct: 60  PGSGHAEYIVHYKAIVWRPYKGEVMDGVVTSVLRTGFFVDCGSLQAFVGRNVRMPCASCR 119

Query: 448 -----SNHLIPDDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
                +  +IP D+ F +   P   T +G   I+K + +R+KI G R
Sbjct: 120 YPSTNTTQMIPSDITFDANATPPQWTDNGEQVIEKGTNIRIKIKGLR 166

[129][TOP]
>UniRef100_C4VAF6 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01
           RepID=C4VAF6_NOSCE
          Length = 155

 Score =  101 bits (251), Expect = 5e-20
 Identities = 59/150 (39%), Positives = 86/150 (57%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF       + L+P Y G  ++  +   L K +EG+C+   G+V++V  I+++ +G + 
Sbjct: 1   MFFVKDFTHIIHLNPCYLGPKIQSLIKDYLYKTIEGSCNDS-GYVISVLEIDDVSEGTV- 58

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
              G  +F +KY+ +V +PFKGE +EA V  +NKMG FA  GP+ +FVSNH IP   E Q
Sbjct: 59  SLNGATSFKIKYKALVLKPFKGETMEASVVEINKMGVFASVGPLTVFVSNHQIPS--EIQ 116

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            G             + KDS VRLKIIGT+
Sbjct: 117 EGG------------LLKDSIVRLKIIGTK 134

[130][TOP]
>UniRef100_A3FQ92 DNA-directed RNA polymerase II, putative n=1 Tax=Cryptosporidium
           parvum Iowa II RepID=A3FQ92_CRYPV
          Length = 178

 Score =  100 bits (250), Expect = 6e-20
 Identities = 53/153 (34%), Positives = 90/153 (58%), Gaps = 5/153 (3%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF + L RN+ + P   G    +++   L   VEG  +  +G+VV V  I     G ++
Sbjct: 1   MFFFVELWRNISVKPSQLGPRYNEHIDDILRSQVEGQRAPPYGYVVCVIKIILKQPGRVQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPV-QIFVSNHLIPDDMEF 480
           D TG +  PVKYQ +V+RP KGE+++ VV  VN++G   + GP+ ++FVS   +P++M +
Sbjct: 61  DSTGLIIVPVKYQAIVYRPIKGEVVDGVVESVNELGVIVDCGPLKRVFVSQSALPENMVY 120

Query: 481 QSG----DMPNYTTSDGSVKIQKDSEVRLKIIG 567
           +SG        Y  +   ++I+++S+VRL++ G
Sbjct: 121 KSGIDGQSSRIYIDTKTQIQIKQNSQVRLRLRG 153

[131][TOP]
>UniRef100_A9USP9 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9USP9_MONBE
          Length = 174

 Score =  100 bits (249), Expect = 8e-20
 Identities = 54/150 (36%), Positives = 80/150 (53%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   L  ++ LHPR+  +NL   L ++L  +VE      HG+V+AV  I+ I +G I 
Sbjct: 1   MFFTETLTHDVLLHPRFLDQNLEAILKTQLYSEVECKVHRSHGYVLAVIKIDRISEGRIL 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
              G + F V Y  V+ RP   ++++ +VT VN  G F   GP+  FVSN  IPD     
Sbjct: 61  FNRGEILFNVTYTAVILRPVPKQVIDTMVTSVNNRGIFVSIGPLTAFVSNSWIPDMTFDS 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
             + P Y ++   + I+ +  VR+KII  R
Sbjct: 121 DANPPRYISAKDGITIEPNDGVRVKIIAVR 150

[132][TOP]
>UniRef100_B6AK20 DNA-directed RNA polymerase II subunit RPB7, putative n=1
           Tax=Cryptosporidium muris RN66 RepID=B6AK20_9CRYT
          Length = 176

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF + L +N+ L P   G    +++   L   VEG      G+VV V  I     G I+
Sbjct: 1   MFFFVELWKNISLSPNQLGPRYDEHIDDILRSQVEGQWITSFGYVVCVVRILLRQPGRIQ 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPV-QIFVSNHLIPDDMEF 480
           DGTG +  P+KYQ +V+RP KGE+++  V  VN++G     GP+ ++FVS   +P+++ +
Sbjct: 61  DGTGLIIVPIKYQAIVYRPMKGEVIDGTVESVNELGIIVNCGPLKRVFVSQSALPENISY 120

Query: 481 QSG----DMPNYTTSDGSVKIQKDSEVRLKIIG 567
            SG        Y  S   ++I++++EVR+++ G
Sbjct: 121 SSGVDGSTARAYLDSKSQLQIKQNTEVRVRLRG 153

[133][TOP]
>UniRef100_Q1WA80 DNA directed RNA polymerase II polypeptide G (Fragment) n=1
           Tax=Ictalurus punctatus RepID=Q1WA80_ICTPU
          Length = 86

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 45/82 (54%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
 Frame = +1

Query: 325 FPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-SGDMPN 501
           +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+  F+S H IP +MEF  + + P 
Sbjct: 5   YPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSNPPC 64

Query: 502 YTTSDGSVKIQKDSEVRLKIIG 567
           Y T D  V IQ++ E+RLKI+G
Sbjct: 65  YKTVDEDVVIQQEDEIRLKIVG 86

[134][TOP]
>UniRef100_C7YKB3 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
           RepID=C7YKB3_NECH7
          Length = 147

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 56/150 (37%), Positives = 79/150 (52%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF   LER + LHP +FGRN+ D +  KL+ DVEGTC+G + F++++    +I +G I 
Sbjct: 1   MFFLYNLERRVTLHPSFFGRNMHDLVTHKLLTDVEGTCAGSY-FIISIMDTFDISEGRIL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G G   F V Y+ VV+RPFKGE                            LIP D+++ 
Sbjct: 60  PGNGLAEFTVGYRAVVWRPFKGET---------------------------LIPSDIKWD 92

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               P   T++    I+ D+ VR+KIIGTR
Sbjct: 93  PNATPPQFTNNEDTVIEPDTHVRVKIIGTR 122

[135][TOP]
>UniRef100_B0Y9T8 RNA polymerase II subunit 7 n=2 Tax=Aspergillus fumigatus
           RepID=B0Y9T8_ASPFC
          Length = 139

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 48/140 (34%), Positives = 83/140 (59%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF     + + LHP YFG N+R+ L+++L ++ EG C+G H FV+ V  + +IG+G + 
Sbjct: 1   MFFLKEETKVISLHPSYFGPNMREYLINRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVL 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G+G   + +KY+ ++++PF+GE ++A+VT V   G F  AGP+ +F++   +       
Sbjct: 60  PGSGQAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKYL-----LS 114

Query: 484 SGDMPNYTTSDGSVKIQKDS 543
           +  MP  ++  G V   K S
Sbjct: 115 TRIMPTRSSKRGPVYGSKSS 134

[136][TOP]
>UniRef100_Q8SRG5 DNA-DIRECTED RNA POLYMERASE II 19kDa SUBUNIT n=1
           Tax=Encephalitozoon cuniculi RepID=Q8SRG5_ENCCU
          Length = 155

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 58/150 (38%), Positives = 83/150 (55%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF     +N+ L P Y G N++  +   L+  VEG+CS   G+VV V  I+ I +  I 
Sbjct: 1   MFFVRDFVQNIHLSPNYLGPNIQALIEEYLLSKVEGSCSSS-GYVVMVLSIDEISESRII 59

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
             TG   F VKY+ +  +P KGE+++A V   NKMG FA  GP+ +F+SNH I       
Sbjct: 60  L-TGETIFTVKYKALTLKPLKGEVIDANVVETNKMGVFASVGPLTVFISNHQI------- 111

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
               PN+   +   +I K+  +RLKIIGT+
Sbjct: 112 ----PNFLLEN---EITKNVMIRLKIIGTK 134

[137][TOP]
>UniRef100_C5KMQ5 DNA-directed RNA polymerase II, putative n=2 Tax=Perkinsus marinus
           ATCC 50983 RepID=C5KMQ5_9ALVE
          Length = 149

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 52/143 (36%), Positives = 84/143 (58%), Gaps = 2/143 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRH-GFVVAVTGIENIGKGLI 300
           M+F +   + + + P   G      L ++L  ++EG  S  H G +V +  I +  K  I
Sbjct: 1   MYFVLTDNKTVAMKPSDLGPMFDIRLDTQLRVELEGNLSKNHDGTIVHIINIVDKSKPKI 60

Query: 301 RDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 480
           +DGTG     V +Q ++FRPFK E+++  V+ V+K+GFFA  GP+++FVS   +PDD+ F
Sbjct: 61  QDGTGMALVNVVFQGIIFRPFKNEVMDCWVSEVSKLGFFAYFGPMKVFVSRSSMPDDVIF 120

Query: 481 QSGDMP-NYTTSDGSVKIQKDSE 546
           +    P  Y+ +D +V IQ+DSE
Sbjct: 121 RETATPVCYSDADQTVVIQQDSE 143

[138][TOP]
>UniRef100_C6T5N3 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6T5N3_SOYBN
          Length = 180

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 55/141 (39%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
 Frame = +1

Query: 154 MQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPV 333
           + LH     R L D  V K  KD+        G+ +AVT +E IG+G +R  TG V FPV
Sbjct: 23  LMLHRAIIVRLLSDFAVKKATKDL--------GYFLAVTTLEKIGEGKVRQHTGDVLFPV 74

Query: 334 KYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDMEFQSGDMPNYTT 510
            +  + F+ FKGEILE VV  V K G F   GP++ +++SN  +P D  +  G+   +  
Sbjct: 75  VFNVITFKFFKGEILEGVVHKVLKHGVFMRCGPIENVYLSNLKMP-DYRYVPGENACF-M 132

Query: 511 SDGSVKIQKDSEVRLKIIGTR 573
           +D   KI KD  VR  +IGT+
Sbjct: 133 NDKMSKIGKDVTVRFSVIGTK 153

[139][TOP]
>UniRef100_B9S9D8 DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative n=1
           Tax=Ricinus communis RepID=B9S9D8_RICCO
          Length = 176

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 50/134 (37%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
 Frame = +1

Query: 178 GRNLRDNLVSKLMKDVEGTCSGRH-GFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVF 354
           G  L+ +++ +L++D     + +  G+ +AVT +E+IG+G +R+ TG V FPV +  + F
Sbjct: 22  GLMLQRSIIIRLLEDFASKKATKDLGYYLAVTTLESIGEGKVREHTGDVLFPVVFNGITF 81

Query: 355 RPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDMEFQSGDMPNYTTSDGSVKI 531
           + F+GEILE VV  V K G F   GP++ I++S   +P D  +  G+ P +  +D + KI
Sbjct: 82  KIFRGEILEGVVHKVLKHGVFIRCGPIENIYLSCMKMP-DYHYVPGENPVF-LNDKTSKI 139

Query: 532 QKDSEVRLKIIGTR 573
           +KD  VR  +IGT+
Sbjct: 140 EKDVVVRFIVIGTK 153

[140][TOP]
>UniRef100_C5Z0L3 Putative uncharacterized protein Sb09g004460 n=1 Tax=Sorghum
           bicolor RepID=C5Z0L3_SORBI
          Length = 175

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRN---LRDNLVSKLMKDVEGT-CSGRHGFVVAVTGIENIGK 291
           +F    +  N+ + P    R    LR  ++ +L++DV     S  HG+ VAV+ ++ I +
Sbjct: 2   VFLEAEMSWNVLISPSQLDRKGLLLRKAIIVRLLEDVTNRRASKEHGYYVAVSQLKAISE 61

Query: 292 GLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 471
           G +R+ TG V FPV + C+  +P KGE++   V  + K G F ++GPV+          D
Sbjct: 62  GKVRELTGDVLFPVSFTCITLKPMKGEVMVGHVDRILKHGVFLKSGPVESIFLAEKSMSD 121

Query: 472 MEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            ++  G+  N    +   K++KD+ VR K++G R
Sbjct: 122 YKYIGGE--NAMFMNDHSKLEKDTAVRFKVLGFR 153

[141][TOP]
>UniRef100_Q75M02 Os05g0157100 protein n=2 Tax=Oryza sativa RepID=Q75M02_ORYSJ
          Length = 175

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 46/146 (31%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
 Frame = +1

Query: 139 VLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGR-HGFVVAVTGIENIGKGLIRDGTG 315
           VL    QL P+  G  LR  ++ +L++D+    + + HG+ +AV+ ++ I +G +R+ TG
Sbjct: 12  VLISPSQLSPQ--GLLLRKAVIVRLLEDIANRKASKDHGYYIAVSELKAISEGKVRELTG 69

Query: 316 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDM 495
            V FPV + C+  +P KGE+L   V  + K G F ++GP++    +     D ++  G+ 
Sbjct: 70  DVLFPVTFTCITQKPMKGEVLVGSVDKILKHGIFLKSGPIESIFLSEKTMSDFKYIGGE- 128

Query: 496 PNYTTSDGSVKIQKDSEVRLKIIGTR 573
            N    +   K++KD+ VR K++G R
Sbjct: 129 -NAVFMNEHSKLEKDTVVRFKVMGFR 153

[142][TOP]
>UniRef100_Q98S95 RNA polymerase II RPB7 subunit-like protein n=1 Tax=Guillardia
           theta RepID=Q98S95_GUITH
          Length = 196

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 2/156 (1%)
 Frame = +1

Query: 112 RNKKMFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGK 291
           R+  M+  + L +N+ +  +     L+  L+++L+   EG   G  G ++ +  I+N   
Sbjct: 23  RHFPMYAIMTLNQNLFIPAKLLNNQLKSTLIAQLITLTEGLPFGNVGSIIMIINIDNQKL 82

Query: 292 -GLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPD 468
            G I  G   V F V +Q VV + FKGEI++A+V  +   G FA AG + IF+SN  I  
Sbjct: 83  YGKILPGFSSVLFKVNFQAVVLKIFKGEIIDAIVKNITSFGIFASAGILNIFISNKFISQ 142

Query: 469 DM-EFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           D+   QS  + N+  S  ++ I+K+  +R KI+  +
Sbjct: 143 DLISQQSQTLFNFKNS--TINIKKNDIIRCKILNLK 176

[143][TOP]
>UniRef100_Q75KS7 Putative receptor kinase n=1 Tax=Oryza sativa Japonica Group
           RepID=Q75KS7_ORYSJ
          Length = 715

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 48/147 (32%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
 Frame = +1

Query: 139 VLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGR-HGFVVAVTGIENIGKGLIRDGTG 315
           VL    +L P+  G  LR  ++  L++++    + + HG+ +AV+ ++ I +G +R+ TG
Sbjct: 47  VLISPSELSPK--GLLLRKAVIVSLLEEIANRKASKDHGYYIAVSELKAISEGKVRELTG 104

Query: 316 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDMEFQSGD 492
            V FPV + C+  +P KGEIL   V  + K G F ++GP++ IF+S   +  D ++  G+
Sbjct: 105 DVLFPVTFTCITQKPTKGEILVGSVDKILKHGVFLKSGPIESIFLSEKTL-SDYKYIGGE 163

Query: 493 MPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            P +       K++KD+ VR K++G R
Sbjct: 164 NPMFMNDHS--KLEKDTAVRFKVMGFR 188

[144][TOP]
>UniRef100_B9FN64 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
           Group RepID=B9FN64_ORYSJ
          Length = 796

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 48/147 (32%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
 Frame = +1

Query: 139 VLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGR-HGFVVAVTGIENIGKGLIRDGTG 315
           VL    +L P+  G  LR  ++  L++++    + + HG+ +AV+ ++ I +G +R+ TG
Sbjct: 12  VLISPSELSPK--GLLLRKAVIVSLLEEIANRKASKDHGYYIAVSELKAISEGKVRELTG 69

Query: 316 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDMEFQSGD 492
            V FPV + C+  +P KGEIL   V  + K G F ++GP++ IF+S   +  D ++  G+
Sbjct: 70  DVLFPVTFTCITQKPTKGEILVGSVDKILKHGVFLKSGPIESIFLSEKTL-SDYKYIGGE 128

Query: 493 MPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            P +       K++KD+ VR K++G R
Sbjct: 129 NPMFMNDHS--KLEKDTAVRFKVMGFR 153

[145][TOP]
>UniRef100_B8AZD0 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
           RepID=B8AZD0_ORYSI
          Length = 175

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 48/147 (32%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
 Frame = +1

Query: 139 VLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGR-HGFVVAVTGIENIGKGLIRDGTG 315
           VL    +L P+  G  LR  ++  L++++    + + HG+ +AV+ ++ I +G +R+ TG
Sbjct: 12  VLISPSELSPK--GLLLRKAVIVSLLEEIANRKASKDHGYYIAVSELKAISEGKVRELTG 69

Query: 316 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDMEFQSGD 492
            V FPV + C+  +P KGEIL   V  + K G F ++GP++ IF+S   +  D ++  G+
Sbjct: 70  DVLFPVTFTCITQKPTKGEILVGSVDKILKHGVFLKSGPIESIFLSEKTL-SDYKYIGGE 128

Query: 493 MPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            P +       K++KD+ VR K++G R
Sbjct: 129 NPMFMNDHS--KLEKDTAVRFKVMGFR 153

[146][TOP]
>UniRef100_A7NX05 Chromosome chr5 scaffold_2, whole genome shotgun sequence n=2
           Tax=Vitis vinifera RepID=A7NX05_VITVI
          Length = 191

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 46/109 (42%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
 Frame = +1

Query: 250 GFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAG 429
           G+ +AVT +ENIG+G +R  +G V FPV + CV F+ F+GEIL+ VV  V K G     G
Sbjct: 61  GYFLAVTTLENIGEGKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCG 120

Query: 430 PVQ-IFVSNHLIPDDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           PV+ I++S   +P D  +  G+ P +     S KI+KD  VR  ++GT+
Sbjct: 121 PVENIYLSCQKMP-DYRYVPGENPVFLNEKLS-KIEKDVVVRFIVMGTK 167

[147][TOP]
>UniRef100_B9HUM9 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9HUM9_POPTR
          Length = 193

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 4/158 (2%)
 Frame = +1

Query: 112 RNKKMFFHIVLERNMQLHPRYF---GRNLRDNLVSKLMKDVEGTCSGRH-GFVVAVTGIE 279
           + KKMF  + L  N+ +        G  L+ ++V  L+ D     + +  G+ +AV+ +E
Sbjct: 14  KGKKMFLKVQLPWNVIIPAENLDAKGLMLQRSIVVCLLADFAKKRATKDLGYYLAVSTLE 73

Query: 280 NIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHL 459
           +IG+G +R  TG V FPV +  + F+ FKGEILE VV  V K G     GP++    + +
Sbjct: 74  SIGEGKVRQHTGDVLFPVVFSGITFKIFKGEILEGVVHKVLKHGVLLRCGPIENIYLSSM 133

Query: 460 IPDDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
              D  +  G+ P +  +D + KI+KD  VR  ++GT+
Sbjct: 134 KMLDYRYVPGENPVF-LNDKTSKIEKDVVVRFVVLGTK 170

[148][TOP]
>UniRef100_A2F013 RNA polymerase Rpb7, N-terminal domain containing protein n=1
           Tax=Trichomonas vaginalis G3 RepID=A2F013_TRIVA
          Length = 182

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 40/147 (27%), Positives = 76/147 (51%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MFF + LE  ++L P +  +     +  +L    EG      G ++ +T I  IGKG + 
Sbjct: 11  MFFEVELEHQLKLLPIFLSQGTSQTIEKQLKHQKEGQFMLGKGLILKITKIIEIGKGRVS 70

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
             TG  ++ VK++ +V RP++  +++A + ++N+    A AGP+ + V   L+  D +F+
Sbjct: 71  SRTGCASYSVKFKALVLRPYEDLVIDAKIMILNEFAIMANAGPLTVAVPKTLLEKDYDFE 130

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKII 564
              +  Y   +G   +   + +R+KII
Sbjct: 131 PETL-TYKQKNGGKTLGSKTVIRVKII 156

[149][TOP]
>UniRef100_B4FXC7 DNA-directed RNA polymerase II 19 kDa polypeptide n=1 Tax=Zea mays
           RepID=B4FXC7_MAIZE
          Length = 175

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRN---LRDNLVSKLMKDVEGT-CSGRHGFVVAVTGIENIGK 291
           +F    +  N+ + P    R    LR  ++ +L++DV     S  HG+ +AV  ++ I +
Sbjct: 2   VFLEAEMSWNVLISPSQLDRKGLLLRKAIIVRLLEDVTNRRASKEHGYYIAVNQLKAISE 61

Query: 292 GLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 471
           G +R+ TG V FPV + C+  +P KGE++   V  + K G F ++GPV+          +
Sbjct: 62  GKVRELTGDVLFPVSFTCITQKPMKGEVMVGHVDRILKHGVFLKSGPVESIFLAEKSMSN 121

Query: 472 MEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
            ++  G+  N    +   K++KD+ VR K++G R
Sbjct: 122 YKYIGGE--NAMFMNDHSKLEKDTAVRFKVLGFR 153

[150][TOP]
>UniRef100_C4JIV5 DNA-directed RNA polymerase II 19 kDa polypeptide n=1
           Tax=Uncinocarpus reesii 1704 RepID=C4JIV5_UNCRE
          Length = 199

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 33/79 (41%), Positives = 52/79 (65%)
 Frame = +1

Query: 337 YQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSD 516
           Y+ +V++PFKGE ++A+VT V   G FAE GP+ +FVS HLIP ++++     P   T +
Sbjct: 2   YRAIVWKPFKGETVDAIVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWDPDATPPQYTDN 61

Query: 517 GSVKIQKDSEVRLKIIGTR 573
               I+K + +R+K+IG R
Sbjct: 62  ADQVIEKGTNLRIKLIGLR 80

[151][TOP]
>UniRef100_B7FLW9 Putative uncharacterized protein n=1 Tax=Medicago truncatula
           RepID=B7FLW9_MEDTR
          Length = 180

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
 Frame = +1

Query: 181 RNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRP 360
           R L D    K  KD+        G+ +AVT ++ IG+G +R  TG V FPV +  V F+ 
Sbjct: 32  RLLSDFAAKKATKDM--------GYFLAVTTLDKIGEGKVRQHTGDVLFPVVFNAVTFKI 83

Query: 361 FKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDMEFQSGDMPNYTTSDGSVKIQK 537
           FKGE+LE VV  V K G F   GP++  ++S+  +P  + +  G+ P Y  +    KI K
Sbjct: 84  FKGEVLEGVVHKVLKHGVFMRIGPIENAYLSSSKMPGYV-YVLGENP-YFMNQKMPKIAK 141

Query: 538 DSEVRLKIIGTR 573
           D + R+ +IGT+
Sbjct: 142 DVKARVVVIGTK 153

[152][TOP]
>UniRef100_B9HKE3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HKE3_POPTR
          Length = 176

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 46/134 (34%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
 Frame = +1

Query: 178 GRNLRDNLVSKLMKDVEGTCSGRH-GFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVF 354
           G  L+ ++V +L+ D     + +  G+ +AV+ +E+IG+G +R  TG V FPV +  + F
Sbjct: 22  GLMLQRSIVVRLLDDFAKKGATKDLGYYLAVSTLESIGEGKVRQHTGDVLFPVVFSGITF 81

Query: 355 RPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDMEFQSGDMPNYTTSDGSVKI 531
           + F+GEIL+ +V  V K G     GP++ I++S   +P D  +  G+ P +  +D + KI
Sbjct: 82  KIFRGEILDGIVHKVLKHGVLLRCGPIENIYLSCMKMP-DYRYVPGENPVF-LNDKTSKI 139

Query: 532 QKDSEVRLKIIGTR 573
           +KD  VR  ++GT+
Sbjct: 140 EKDVVVRFVVLGTK 153

[153][TOP]
>UniRef100_Q0DJV3 Os05g0224700 protein n=1 Tax=Oryza sativa Japonica Group
           RepID=Q0DJV3_ORYSJ
          Length = 782

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 46/142 (32%), Positives = 81/142 (57%), Gaps = 2/142 (1%)
 Frame = +1

Query: 139 VLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGR-HGFVVAVTGIENIGKGLIRDGTG 315
           VL    +L P+  G  LR  ++  L++++    + + HG+ +AV+ ++ I +G +R+ TG
Sbjct: 12  VLISPSELSPK--GLLLRKAVIVSLLEEIANRKASKDHGYYIAVSELKAISEGKVRELTG 69

Query: 316 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDMEFQSGD 492
            V FPV + C+  +P KGEIL   V  + K G F ++GP++ IF+S   +  D ++  G+
Sbjct: 70  DVLFPVTFTCITQKPTKGEILVGSVDKILKHGVFLKSGPIESIFLSEKTL-SDYKYIGGE 128

Query: 493 MPNYTTSDGSVKIQKDSEVRLK 558
            P +       K++KD+ VR K
Sbjct: 129 NPMFMNDHS--KLEKDTAVRFK 148

[154][TOP]
>UniRef100_Q9LIK8 RNA polymerase II fifth largest subunit-like protein n=1
           Tax=Arabidopsis thaliana RepID=Q9LIK8_ARATH
          Length = 157

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 39/107 (36%), Positives = 63/107 (58%)
 Frame = +1

Query: 250 GFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAG 429
           G+++  T +ENIG+G I++ TG + FPV +  + F+ FKGEI+  VV  V+K G F ++G
Sbjct: 29  GYLITPTILENIGEGKIKEQTGEIQFPVVFNGICFKMFKGEIVHGVVHKVHKTGVFLKSG 88

Query: 430 PVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGT 570
           P +I   +H+     EF  G+ P +     S +IQ  + VR  ++ T
Sbjct: 89  PYEIIYLSHMKMPGYEFIPGENPFFMNQYMS-RIQIGARVRFVVLDT 134

[155][TOP]
>UniRef100_Q8LE42 RNA polymerase II fifth largest subunit-like protein n=1
           Tax=Arabidopsis thaliana RepID=Q8LE42_ARATH
          Length = 174

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 39/107 (36%), Positives = 63/107 (58%)
 Frame = +1

Query: 250 GFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAG 429
           G+++  T +ENIG+G I++ TG + FPV +  + F+ FKGEI+  VV  V+K G F ++G
Sbjct: 46  GYLITPTILENIGEGKIKEQTGEIQFPVVFNGICFKMFKGEIVHGVVHKVHKTGVFLKSG 105

Query: 430 PVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGT 570
           P +I   +H+     EF  G+ P +     S +IQ  + VR  ++ T
Sbjct: 106 PYEIIYLSHMKMPGYEFIPGENPFFMNQYMS-RIQIGARVRFVVLDT 151

[156][TOP]
>UniRef100_O23322 RNA polymerase II fifth largest subunit like protein n=1
           Tax=Arabidopsis thaliana RepID=O23322_ARATH
          Length = 161

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 40/108 (37%), Positives = 63/108 (58%)
 Frame = +1

Query: 250 GFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAG 429
           G+ VAVT ++ IG+G IR+ TG V FPV +  + F+ FKGEI+  VV  V K G F   G
Sbjct: 30  GYYVAVTTLDKIGEGKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCG 89

Query: 430 PVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           P++    ++    D ++  G+ P +     S +IQ ++ VR+ +IG +
Sbjct: 90  PIENVYLSYTKMPDYKYIPGENPIFMNEKTS-RIQVETTVRVVVIGIK 136

[157][TOP]
>UniRef100_A6QRA1 At4g14660 n=1 Tax=Arabidopsis thaliana RepID=A6QRA1_ARATH
          Length = 178

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 40/108 (37%), Positives = 63/108 (58%)
 Frame = +1

Query: 250 GFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAG 429
           G+ VAVT ++ IG+G IR+ TG V FPV +  + F+ FKGEI+  VV  V K G F   G
Sbjct: 47  GYYVAVTTLDKIGEGKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCG 106

Query: 430 PVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR 573
           P++    ++    D ++  G+ P +     S +IQ ++ VR+ +IG +
Sbjct: 107 PIENVYLSYTKMPDYKYIPGENPIFMNEKTS-RIQVETTVRVVVIGIK 153

[158][TOP]
>UniRef100_B9HUM8 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HUM8_POPTR
          Length = 189

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 42/128 (32%), Positives = 76/128 (59%), Gaps = 2/128 (1%)
 Frame = +1

Query: 196 NLVSKLMKDVEGTCSGR-HGFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGE 372
           ++V+ L+KD+    + + HG+ +AVT +++IGKG + + +G V F V+++C  F P KGE
Sbjct: 28  SIVTHLLKDLLSMKASKDHGYFLAVTNLKSIGKGEVVNKSGDVLFHVEFKCRTFMPMKGE 87

Query: 373 ILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDMEFQSGDMPNYTTSDGSVKIQKDSEV 549
           IL+ VV    + G     GPV+ IF+S   +P + ++ S + P +  +D   +I+ +  V
Sbjct: 88  ILQGVVHRTFRHGVLLRCGPVKYIFLSARKMP-NYQYTSEENPVF-LNDELARIENNVLV 145

Query: 550 RLKIIGTR 573
           R  ++  R
Sbjct: 146 RFSVLDVR 153

[159][TOP]
>UniRef100_O29148 DNA-directed RNA polymerase, subunit E' (RpoE1) n=1
           Tax=Archaeoglobus fulgidus RepID=O29148_ARCFU
          Length = 189

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 37/147 (25%), Positives = 65/147 (44%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M+  I L   +++ P   G ++   + S L +  EG     +G ++ +  IE IG+G I 
Sbjct: 1   MYARIKLRDTVRVPPSKLGEDIEKVINSLLWEQFEGRLDREYGMIIGIESIEEIGEGRII 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           +G G V F V +  + FRP   E++E  V  + + G F   GP    +    + DD    
Sbjct: 61  EGDGGVYFDVVFNAICFRPLHQEVVEGEVIEIVEFGAFVSIGPFDALLHMSQVTDDYMVF 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKII 564
                     +    +Q+  +VR +I+
Sbjct: 121 DEKNKRLVGRETKKVLQEGDKVRARIV 147

[160][TOP]
>UniRef100_A7I4V6 DNA-directed RNA polymerase n=1 Tax=Candidatus Methanoregula boonei
           6A8 RepID=A7I4V6_METB6
          Length = 213

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 33/116 (28%), Positives = 59/116 (50%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M++ + LE  +++ P   G  L   ++  L + +EG+     G  +AVT +E++G+G I 
Sbjct: 1   MYYKMTLEDKVRVPPNRLGEKLDKVILEVLQEQLEGSIDKELGVFIAVTKVEHVGEGEIV 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 471
            G G V + VK++ +V R    E++E +V      G F   GP+   +    I D+
Sbjct: 61  PGDGGVYYDVKFEGLVLRLALQEVIEGIVVETTSFGAFISLGPIDAMLHVSQISDE 116

[161][TOP]
>UniRef100_A3CXR5 DNA-directed RNA polymerase, subunit E' n=1 Tax=Methanoculleus
           marisnigri JR1 RepID=A3CXR5_METMJ
          Length = 188

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 32/116 (27%), Positives = 59/116 (50%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M++ + LE  +++ P   G +L   +++ L + +EG+ +   G  +AVT I N+G+G + 
Sbjct: 1   MYYKMTLEDKVRVPPHRLGEDLEKVILNVLQEQLEGSIAKEIGIFIAVTNILNVGEGELI 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 471
            G G V + V+++  V R    E++E  V      G F   GP+   +    I D+
Sbjct: 61  PGDGAVYYDVRFEAAVLRLALQEVIEGQVVETTSFGAFVSLGPIDAMLHVSQISDE 116

[162][TOP]
>UniRef100_C8S8R3 DNA-directed RNA polymerase n=1 Tax=Ferroglobus placidus DSM 10642
           RepID=C8S8R3_FERPL
          Length = 188

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 34/147 (23%), Positives = 66/147 (44%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M+  + +   +++ P   G ++ + +   L +  EG     +G +V +  IE IG+G I 
Sbjct: 1   MYARVKIRDTVRVPPNRLGEDMEEVINELLWEQFEGKLDREYGMIVGIESIEEIGEGRII 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
           +G G V F V +  + F+P   E++E  V  + + G F   GP+   +    I DD    
Sbjct: 61  EGDGGVYFDVIFNAITFKPLLQEVVEGEVVEIVEFGAFVSIGPMDGLLHMSQIMDDYIVY 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKII 564
                     +    +++   VR++I+
Sbjct: 121 DEKNKRLVGKETKRSLEEGDAVRVRIV 147

[163][TOP]
>UniRef100_Q8I150 CG31155-PA (Fragment) n=1 Tax=Drosophila pseudoobscura
           pseudoobscura RepID=Q8I150_DROPS
          Length = 73

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 28/51 (54%), Positives = 37/51 (72%)
 Frame = +1

Query: 136 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIG 288
           I LE  + LHPRYFG  L + +  KL  +VEGTC+G++GFV+AVT I+ IG
Sbjct: 23  ISLEHEILLHPRYFGPQLLETVKQKLYSEVEGTCTGKYGFVIAVTTIDQIG 73

[164][TOP]
>UniRef100_Q12TT6 DNA-directed RNA polymerase subunit E' n=1 Tax=Methanococcoides
           burtonii DSM 6242 RepID=Q12TT6_METBU
          Length = 192

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 37/147 (25%), Positives = 71/147 (48%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M+  + L+  +++ PR  G ++  ++   L + +EG      G +VA+T IE +G+G I 
Sbjct: 1   MYKRMKLKDTIRVAPRLLGEDVGVSVKDALKEKLEGRVDKALGSIVAITDIEEVGEGHIL 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G G V + V ++ ++F P   E++E +V    + G F   G +   +    I DD    
Sbjct: 61  VGDGAVYYDVIFEAIIFIPQLQEVIEGLVVETVEFGAFVSIGAMDGLLHVSQITDDFMSY 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKII 564
            G      +  G+  + +  +VR +I+
Sbjct: 121 DGKNGRLISKVGNRTLSEGDKVRARIV 147

[165][TOP]
>UniRef100_D0AA03 RNA polymerase subunit, putative n=2 Tax=Trypanosoma brucei
           RepID=D0AA03_TRYBG
          Length = 190

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 21/168 (12%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTC-----------------SGRHG 252
           MF+ + LERN+++ P    R L  +L   L K VEGT                       
Sbjct: 1   MFYKMKLERNIKVEPHLLERTLHRHLEEYLRKAVEGTPLHLSLGNALRSGLARTNQNSSA 60

Query: 253 FVVAVTGIENIG--KGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 426
            ++AV  I N    +G + D  G V+F VKY+ +VF+  +GE+++ +V+ V + G++ + 
Sbjct: 61  VIIAVLDILNTSSLEGRVLDD-GSVSFFVKYEGLVFKLHRGEVIDVIVSSVEREGWWGDV 119

Query: 427 -GPVQIFVSNHLIPDDMEFQSGDMPN-YTTSDGSVKIQKDSEVRLKII 564
            G  ++++S   + ++  ++S  M   + T DG+  +++   VR++++
Sbjct: 120 MGVGRMYISRGQMGNEWVYESDGMRGIWITKDGARSVKEGEIVRVRVV 167

[166][TOP]
>UniRef100_A0B8S5 DNA-directed RNA polymerase, subunit E' n=1 Tax=Methanosaeta
           thermophila PT RepID=A0B8S5_METTP
          Length = 206

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 40/147 (27%), Positives = 65/147 (44%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M+  + LE  +++ P   G  L D +   L    E       G +VA+ G+++IG+G I 
Sbjct: 1   MYKRMKLEGVVRIPPEDMGNPLNDAVEMALRNKYEARVDRTLGAIVAILGVDSIGEGRII 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G G V + V +  VVF+P   E++E  V  + K G F   GP    +    I D+    
Sbjct: 61  AGDGAVYYDVIFDAVVFKPEMQEVVEGEVVEIVKFGAFVSIGPFDGLLHVSQITDEYMAY 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKII 564
                   + D +  + +   VR +II
Sbjct: 121 DEKNARLVSKDTNKFLAEGDRVRARII 147

[167][TOP]
>UniRef100_UPI000150A069 RNA polymerase Rpb7, N-terminal domain containing protein n=1
           Tax=Tetrahymena thermophila RepID=UPI000150A069
          Length = 173

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
 Frame = +1

Query: 124 MFFHIV-LERNMQLHPRYFGR---------NLRDNLVSKLMKDVEGTCSGRHGFVVAVTG 273
           MF+H   L   +Q+HP + G          N  D L  +L++ VEG  S  HG+++ V  
Sbjct: 1   MFYHTSGLRTILQIHPTHMGMLIGNDKVNLNNNDLLKKELIEKVEGKKSNEHGYIILVVN 60

Query: 274 IENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIF-VS 450
           +  + K LI D  GF+   +++  + F+P   E ++  +T + +       GP+ IF V 
Sbjct: 61  LRYMSKPLI-DYDGFIKVEIQFDALTFKPQLKEYIDIQITEIKQNHIAGSVGPMNIFYVP 119

Query: 451 NHLIPDDMEFQSGD 492
           N  +P  ++ +  D
Sbjct: 120 NRKLPQQLQNELKD 133

[168][TOP]
>UniRef100_B8GFC6 DNA-directed RNA polymerase n=1 Tax=Methanosphaerula palustris
           E1-9c RepID=B8GFC6_METPE
          Length = 199

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 32/116 (27%), Positives = 58/116 (50%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M++ ++LE  +++ P   G +L   ++  L + +EG+     G  +AVT +  +G+G + 
Sbjct: 1   MYYKLLLEDKVRVPPHRLGEDLIKVILDVLQEQLEGSIDKEIGIFIAVTKVIEVGEGEMV 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 471
            G G V + VK++ +  R    E+LE VV      G F   GP+   +    I D+
Sbjct: 61  PGDGAVYYDVKFEALGLRLSLQEVLEGVVVETTTFGAFVSLGPIDAMLHVSQISDE 116

[169][TOP]
>UniRef100_A6UTP7 DNA-directed RNA polymerase n=1 Tax=Methanococcus aeolicus Nankai-3
           RepID=A6UTP7_META3
          Length = 195

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 37/147 (25%), Positives = 65/147 (44%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M+  I +   +++ P+ FG  L+D++   LM+  EG      GF++++  I  IG G + 
Sbjct: 1   MYKLITISDTIRVPPKMFGAPLKDSIHKILMEKYEGLMDKDFGFIMSIGDIGEIGGGKVV 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G G    P  +  + + P   EI+E  +  V + G F   GP+   +    I DD    
Sbjct: 61  YGDGAAYHPAIFDLLCYEPELYEIIEGEIVDVVEFGLFVRLGPLDGLIHISQIMDDFVSY 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKII 564
                     +    I+K  +VR +I+
Sbjct: 121 DPQRGAIIGKESGKVIEKGDKVRARIV 147

[170][TOP]
>UniRef100_A8TGB5 DNA-directed RNA polymerase n=1 Tax=Methanococcus voltae A3
           RepID=A8TGB5_METVO
          Length = 211

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/153 (23%), Positives = 68/153 (44%)
 Frame = +1

Query: 106 KGRNKKMFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI 285
           K R   M+  + +E  +++ P+ FG  L+DN+   LM+  EG      GF++A+  I+ I
Sbjct: 17  KERGVYMYKILTIEDTIRIPPKMFGNPLKDNVQKVLMEKYEGILDKDLGFILAIEDIDQI 76

Query: 286 GKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIP 465
            +G I  G G       +  + + P   E++E  +  + + G F   GP+   +    + 
Sbjct: 77  SEGDIIYGDGAAYHDTTFNILTYEPEVHEMIEGEIVDIVEFGAFIRLGPLDGLIHISQVM 136

Query: 466 DDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKII 564
           DD              +    ++K  +VR +I+
Sbjct: 137 DDYVAFDPQREAIIGKETGKVLEKGDKVRARIV 169

[171][TOP]
>UniRef100_A2SR75 DNA-directed RNA polymerase, subunit E' n=1 Tax=Methanocorpusculum
           labreanum Z RepID=A2SR75_METLZ
          Length = 190

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 32/116 (27%), Positives = 53/116 (45%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M++ + L   +++ P   G +L   ++  L +  EG+     G  +AVTG+  +G G I 
Sbjct: 1   MYYKLKLNDKVRVPPERMGEDLNTVILDVLQEQFEGSVDKEMGIFIAVTGVNRVGDGEII 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 471
              G   + V ++ VV R    EI+E VV      G F   GP+   +    I D+
Sbjct: 61  YSDGGAYYDVDFEAVVLRLSLQEIIEGVVVETTSFGAFVSLGPIDAMLHMSQISDE 116

[172][TOP]
>UniRef100_C9RIC2 DNA-directed RNA polymerase n=1 Tax=Methanocaldococcus vulcanius M7
           RepID=C9RIC2_9EURY
          Length = 189

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 33/106 (31%), Positives = 56/106 (52%)
 Frame = +1

Query: 154 MQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPV 333
           +++ P  FG++L++ +   LM+  EG      GFV+++  I++IG G +  G G    PV
Sbjct: 11  VKVPPEEFGKDLKETIKKILMEKYEGRLDKDIGFVLSIVDIKDIGDGKVVHGDGSAYHPV 70

Query: 334 KYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 471
            ++ +V+ P   E++E  V  V + G F   GP+   V    I DD
Sbjct: 71  IFETLVYLPEMYELVEGEVVDVVEFGSFVRLGPLDGLVHVSQIMDD 116

[173][TOP]
>UniRef100_Q57840 DNA-directed RNA polymerase subunit E' n=1 Tax=Methanocaldococcus
           jannaschii RepID=RPOE1_METJA
          Length = 187

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 31/106 (29%), Positives = 57/106 (53%)
 Frame = +1

Query: 154 MQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPV 333
           +++ P  FG++L++ +   LM+  EG      GFV+++  +++IG+G +  G G    PV
Sbjct: 11  VKVPPEEFGKDLKETVKKILMEKYEGRLDKDVGFVLSIVDVKDIGEGKVVHGDGSAYHPV 70

Query: 334 KYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 471
            ++ +V+ P   E++E  V  V + G F   GP+   +    I DD
Sbjct: 71  VFETLVYIPEMYELIEGEVVDVVEFGSFVRLGPLDGLIHVSQIMDD 116

[174][TOP]
>UniRef100_Q8TJT5 DNA-directed RNA polymerase, subunit E n=1 Tax=Methanosarcina
           acetivorans RepID=Q8TJT5_METAC
          Length = 194

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 36/137 (26%), Positives = 61/137 (44%)
 Frame = +1

Query: 154 MQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPV 333
           +++ P   G  +   + + L + +EG    + G +VAV  I+ +G+G I  G G V + V
Sbjct: 11  VRIPPTLLGEEIMPTIKNALREKLEGQVDKKLGSLVAVYNIDEVGEGHILVGDGAVYYDV 70

Query: 334 KYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTS 513
            ++ ++F P   EI+E  V      G F   GP+   +    I DD            T 
Sbjct: 71  TFEAIMFIPELQEIIEGEVVEAVGFGVFVGMGPMDGLLHVSQITDDFISYDAKNARLVTK 130

Query: 514 DGSVKIQKDSEVRLKII 564
           +G   I +   VR +I+
Sbjct: 131 NGGKSIAEGDHVRARIV 147

[175][TOP]
>UniRef100_Q8PZ98 DNA-directed RNA polymerase subunit E' n=1 Tax=Methanosarcina mazei
           RepID=Q8PZ98_METMA
          Length = 194

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 38/147 (25%), Positives = 64/147 (43%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M+  + L   +++ P   G  +   + + L + +EG    + G +VAV  I+ +G+G I 
Sbjct: 1   MYKLMKLVDTVRIPPTLLGEEIMPTIKNALREKLEGQVDKKLGSLVAVYNIDEVGEGHIL 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G G V + V ++ ++F P   EI+E  V      G F   GP+   +    I DD    
Sbjct: 61  VGDGAVYYDVTFEAIMFYPDLQEIIEGEVVEAVGFGVFIGMGPMDGLLHVSQITDDFISY 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKII 564
                   T  G   I +   VR +I+
Sbjct: 121 DAKNARLVTKSGGKSIAEGDHVRARIV 147

[176][TOP]
>UniRef100_Q4Q5F4 RNA polymerase-like protein, putative n=1 Tax=Leishmania major
           RepID=Q4Q5F4_LEIMA
          Length = 199

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 48/173 (27%), Positives = 87/173 (50%), Gaps = 26/173 (15%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEG-----------------TCSGRHG 252
           MF+ IVL+R + + P      L  +L++ L + VEG                 T S    
Sbjct: 1   MFYKIVLQRTVNVKPADLCNTLNRSLLTFLREAVEGKPLPSPDSIASIALDYVTASKSSA 60

Query: 253 FVVAVTGIENIG--KGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 426
            V+AV  I N    +G + D  G V+F + Y+ +V +  +GE+L+ +V+ V++ GF+A  
Sbjct: 61  VVIAVLDILNAETLQGKVLDD-GSVSFRLTYEAMVLKLHRGEVLDLLVSDVDETGFWASV 119

Query: 427 -GPVQIFVSNHLIPDDMEFQ------SGDMPNYTTSDGSVKIQKDSEVRLKII 564
            G  ++FV+ + + +DM+          +   + ++D    I+KD+ VRL++I
Sbjct: 120 YGVNKLFVNRNQMGEDMKTGKSEWSFEAETAAWVSNDDRRSIKKDTMVRLRVI 172

[177][TOP]
>UniRef100_Q8ZSV9 DNA-directed RNA polymerase subunit E' (RpoE1) n=1 Tax=Pyrobaculum
           aerophilum RepID=Q8ZSV9_PYRAE
          Length = 191

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
 Frame = +1

Query: 145 ERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVT 324
           E  +++ P  FG+ L D  +S+L    EG      G++VAV  ++   +G I  G G   
Sbjct: 9   EDYVRVPPTEFGKPLEDIALSQLKSRYEGKVLREVGYIVAVLNVKVGREGKIVFGDGGTY 68

Query: 325 FPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSN-HLIPDDMEFQSGDMPN 501
               +  + F P  GE++E VV    +MG     GP+  F++  H++ D   F      +
Sbjct: 69  HRAVFTMLAFMPLDGEVVEGVVENAREMGMLVRIGPILGFINKIHIMDDPNIFFDASTKS 128

Query: 502 YTTSDGSVKIQKDSEVRLKIIG 567
           Y       ++     VR +I G
Sbjct: 129 YIGERTKRRVSVGDVVRARITG 150

[178][TOP]
>UniRef100_Q0W373 DNA-directed RNA polymerase, subunit E n=1 Tax=uncultured
           methanogenic archaeon RC-I RepID=Q0W373_UNCMA
          Length = 194

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 2/149 (1%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M+  + L   +++ P+    +L   +   L + +EG      G +VAVT +  IG+G I 
Sbjct: 1   MYRKVRLVDIIRIPPQRLEEDLEKVISETLREKLEGRIDKTLGSIVAVTDVVEIGEGHIL 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G G V + V +  + ++P + EI+E  V  +   G F   GPV   V    I D  EF 
Sbjct: 61  VGDGAVYYEVTFDAIAYKPEQQEIIEGSVVEIVAFGAFIAVGPVDCLVHVSQIAD--EFM 118

Query: 484 SGDMPN--YTTSDGSVKIQKDSEVRLKII 564
           + D  N   T+ + +  + +   VR +I+
Sbjct: 119 TYDEKNARLTSRETNRSLNEGDHVRARIV 147

[179][TOP]
>UniRef100_A4HKB6 RNA polymerase-like protein, putative n=1 Tax=Leishmania
           braziliensis RepID=A4HKB6_LEIBR
          Length = 199

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 47/173 (27%), Positives = 88/173 (50%), Gaps = 26/173 (15%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEG-----------------TCSGRHG 252
           MF+ IVL+R + + P      L  +L++ L + VEG                 T S    
Sbjct: 1   MFYKIVLQRTVNVKPADLCNTLNRSLLTFLREAVEGKPLPSPDSVASIALDFVTASKSSA 60

Query: 253 FVVAVTGIENIG--KGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 426
            V+AV  I N    +G + D  G VTF + Y+ +V +  +GE+L+ +V+ V++ GF+A  
Sbjct: 61  VVIAVLDILNAETLQGKVLDD-GSVTFRLTYEALVLKLHRGEVLDLLVSDVDETGFWASV 119

Query: 427 -GPVQIFVSNHLIPDDMEFQS------GDMPNYTTSDGSVKIQKDSEVRLKII 564
            G  ++FV+ + + +D++  +       +   + ++D    I+KD+ VR+++I
Sbjct: 120 YGVNKLFVNRNQMGEDVKTGALEWSFEAETAAWVSNDDRHSIKKDTMVRVRVI 172

[180][TOP]
>UniRef100_C5U6S4 DNA-directed RNA polymerase n=1 Tax=Methanocaldococcus infernus ME
           RepID=C5U6S4_9EURY
          Length = 184

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 30/106 (28%), Positives = 55/106 (51%)
 Frame = +1

Query: 154 MQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPV 333
           +++ P  FG +L++ +   L++  EG      GFV+++  ++ IG+G +  G G    PV
Sbjct: 11  VRIPPSKFGSDLKETVKEILIEKYEGMLEKNLGFVLSIIDVKEIGEGRVIHGDGSAYHPV 70

Query: 334 KYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 471
            ++ ++++P   E++E  V  V   G F   GP+   V    I DD
Sbjct: 71  VFEALIYKPEIYELVEGEVVDVVDFGLFVRLGPLDGLVHVSQIMDD 116

[181][TOP]
>UniRef100_A4I7U5 RNA polymerase-like protein, putative n=1 Tax=Leishmania infantum
           RepID=A4I7U5_LEIIN
          Length = 199

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 26/173 (15%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEG-----------------TCSGRHG 252
           MF+ +VL+R + + P      L  +L++ L + VEG                 T S    
Sbjct: 1   MFYKVVLQRTVNVKPADLCNTLNRSLLTFLRQAVEGKPLPSPDSVASIALDYVTASKSSA 60

Query: 253 FVVAVTGIENIG--KGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 426
            V+AV  I N    +G + D  G V+F + Y+ +V +  +GE+L+ +V+ V++ GF+A  
Sbjct: 61  VVIAVLDILNAETLQGKVLDD-GSVSFRLTYEAMVLKLHRGEVLDLLVSDVDETGFWASV 119

Query: 427 -GPVQIFVSNHLIPDDMEFQ------SGDMPNYTTSDGSVKIQKDSEVRLKII 564
            G  ++FV+ + + +D++          +   + ++D    I+KD+ VRL++I
Sbjct: 120 YGVNKLFVNRNQMGEDLKTGRSEWSFEAETAAWVSNDDRRSIKKDTMVRLRVI 172

[182][TOP]
>UniRef100_Q46FS3 DNA-directed RNA polymerase, subunit E' n=1 Tax=Methanosarcina
           barkeri str. Fusaro RepID=Q46FS3_METBF
          Length = 194

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 37/147 (25%), Positives = 64/147 (43%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M+  + L   +++ P   G  +   + + L + +EG    + G +VA+  I  IG+G I 
Sbjct: 1   MYKMMKLVDTVRIPPTLLGEEVTQTVKNALREKLEGQVDKKLGSLVAICKIVEIGEGHIL 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G G V + V ++ ++F P   EI+E  V      G F   GP+   +    I DD    
Sbjct: 61  VGDGAVYYDVTFEAIMFVPELQEIIEGEVVETVGFGVFVGMGPMDGLLHVSQITDDFISY 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKII 564
                   T +G   I +   VR +++
Sbjct: 121 DAKNARLVTKNGGKSIAEGDHVRARVV 147

[183][TOP]
>UniRef100_A8QFZ7 RNA polymerase Rpb7, N-terminal domain containing protein n=1
           Tax=Brugia malayi RepID=A8QFZ7_BRUMA
          Length = 220

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF   VLE  +++ P  FG +    L+ +L + +        G  + +  + ++G   I 
Sbjct: 1   MFVLAVLEDTVRIKPHQFGESFEPMLMKRLNEQLANKIVPGLGLCIIIYDLLDVGVSYIL 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMG------FFAEAGPVQIFVSNHLIP 465
            G G     VK++ VVFRPF  EI+EA V   N  G      FF +     IF+  H +P
Sbjct: 61  PGDGSTHTKVKFRYVVFRPFIDEIIEAKVLSSNAEGLMLSVIFFED-----IFIPAHRLP 115

Query: 466 DDMEFQSGDMP---NYTTSDG-SVKIQKD--SEVRLKII 564
               F+  +     +Y   DG S K+  D    VR ++I
Sbjct: 116 QPSIFEEEEQIWYWDYQPEDGQSAKLYMDPGKTVRFRVI 154

[184][TOP]
>UniRef100_A4WN10 DNA-directed RNA polymerase, subunit E' n=1 Tax=Pyrobaculum
           arsenaticum DSM 13514 RepID=A4WN10_PYRAR
          Length = 191

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
 Frame = +1

Query: 145 ERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVT 324
           E  +++ P  FG+ L +  + +L    EG      G+VVAV   +   +G I  G G   
Sbjct: 9   EDYVRIPPSEFGKPLEETALLQLKNRYEGRVLREVGYVVAVLNTKVSREGKIVFGDGGTY 68

Query: 325 FPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSN-HLIPDDMEFQSGDMPN 501
               +  + F P  GEI+E VV  V +MG     GPV  F++  H++ +   F      +
Sbjct: 69  HKAVFTMLAFMPLDGEIVEGVVENVREMGMLVRIGPVLGFINKIHVMDEPNIFFDASTKS 128

Query: 502 YTTSDGSVKIQKDSEVRLKIIG 567
           Y       K+     VR +I G
Sbjct: 129 YIGERTKRKVTVGDIVRARITG 150

[185][TOP]
>UniRef100_A1RT16 DNA-directed RNA polymerase, subunit E' n=1 Tax=Pyrobaculum
           islandicum DSM 4184 RepID=A1RT16_PYRIL
          Length = 195

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
 Frame = +1

Query: 145 ERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVT 324
           E  +++ P  FG+ L D  + +L    EG      G+VVAV   +   +G I  G G   
Sbjct: 13  EDYVRIPPTEFGKPLEDIALQQLRSKYEGRVLREVGYVVAVLTAKVGREGRIVFGDGGTY 72

Query: 325 FPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSN-HLIPDDMEFQSGDMPN 501
               +  + + P  GEI+E VV  V +MG     GP+  F++  H++ +   F      +
Sbjct: 73  HRAVFTMLAYMPLDGEIIEGVVENVREMGMLVRIGPILGFINKIHVMDEPNIFFDASTKS 132

Query: 502 YTTSDGSVKIQKDSEVRLKIIG 567
           Y       KI     VR +I G
Sbjct: 133 YIGERSKRKISVGDIVRARITG 154

[186][TOP]
>UniRef100_B6K0P2 RNA polymerase III subunit Rpc25 n=1 Tax=Schizosaccharomyces
           japonicus yFS275 RepID=B6K0P2_SCHJY
          Length = 205

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF   V+   +++HP  F +  ++ L  ++ K        + G  +A+     IG+G+I+
Sbjct: 1   MFVLSVISDVVKIHPSDFWKPTKEALSDEINKKYANKVIQQVGLAIAIFDFLTIGEGIIK 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPV-QIFVSNHLIPD 468
            G G     VK++ +VFRPF+GE++   +    ++G     G    IFV   ++PD
Sbjct: 61  FGDGCSYMNVKFRLLVFRPFRGEVMLGRIKSCTELGIRVTLGFFDDIFVPKEMLPD 116

[187][TOP]
>UniRef100_C1E0N5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E0N5_9CHLO
          Length = 201

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
 Frame = +1

Query: 202 VSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILE 381
           + K++KD+        G V+ +  I +I  G +  G G   F V+++ VVFRPF GEI+E
Sbjct: 36  IDKVIKDL--------GLVITLYEIVSIEGGTVYPGEGSAHFKVEFRVVVFRPFVGEIIE 87

Query: 382 AVVTMVNKMGFFAEAGPV-QIFVSNHLIPDDMEFQSGD-MPNYTTSDGSVKIQKDSEVRL 555
             +   +K G + + G    IFV  HL+ +   F   + +  +   D  + +  +  VR+
Sbjct: 88  GTLKKADKTGLYVDIGFFSDIFVPEHLMQEPSVFDEDEQLWVWMYEDAKMFMDLEEPVRI 147

Query: 556 KIIGTR 573
           +I G +
Sbjct: 148 RIQGIK 153

[188][TOP]
>UniRef100_A8PDR7 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
           okayama7#130 RepID=A8PDR7_COPC7
          Length = 227

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           MF   V++  + +HP++FG    + + ++L K          G  + V  +  +G G +R
Sbjct: 1   MFSLAVIKDTVPIHPQHFGIPPEEAITAELNKKYANRVLHDVGLCICVFDLTEVGDGRVR 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNK------MGFFAEAGPVQIFV------ 447
            G GF+ + V ++  VFRPF  E++ A V   ++      MGFF +     I++      
Sbjct: 61  YGDGFLWYKVTFRMTVFRPFVSEVVVAKVKSSDERGIRLTMGFFDDIYIPAIYLPQPSVF 120

Query: 448 -----SNHLIPDDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKI 561
                +   +PD     S D+ N  TS+  + I ++  VR+++
Sbjct: 121 DRHERAYFWLPDSPLTDSNDLLNTPTSE-RMYIDQNEVVRVRV 162

[189][TOP]
>UniRef100_A8A8L6 DNA-directed RNA polymerase, subunit E' n=1 Tax=Ignicoccus
           hospitalis KIN4/I RepID=A8A8L6_IGNH4
          Length = 177

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
 Frame = +1

Query: 154 MQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPV 333
           +++ P  FG +L+   +  L ++ EG      G ++ VT ++   +G I  G G      
Sbjct: 11  VRIPPERFGEDLKKVALELLREEYEGVIDEELGIILTVTDVDISPEGYIVPGDGGTYHEA 70

Query: 334 KYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD-MEFQSGDMPNYTT 510
            +  + F+P + E++E +V  V K G +   GP+   V    + D+  E+ +       T
Sbjct: 71  TFTLLAFKPLRNEVVEGIVVNVTKNGIYVNIGPIDGMVHKAQLGDERFEYDAATGSMVGT 130

Query: 511 SDGSVKIQKDSEVRLKII 564
           S  +V I++   VR +I+
Sbjct: 131 STKTV-IKRGDLVRARIV 147

[190][TOP]
>UniRef100_C7P808 DNA-directed RNA polymerase n=1 Tax=Methanocaldococcus fervens AG86
           RepID=C7P808_METFA
          Length = 187

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 28/106 (26%), Positives = 55/106 (51%)
 Frame = +1

Query: 154 MQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPV 333
           +++ P  FG++L++ +   L++  EG      GF++++  ++ +G G +  G G    PV
Sbjct: 11  VRVPPEEFGKDLKETIKKILIEKYEGRLDKDVGFILSIVDVKEVGDGKVVHGDGSAYHPV 70

Query: 334 KYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 471
            ++ +V+ P   E++E  V  V + G F   GP+   +    I DD
Sbjct: 71  VFETLVYVPEMYELVEGEVVDVVEFGSFVRLGPLDGLIHVSQIMDD 116

[191][TOP]
>UniRef100_Q8TVE1 DNA-directed RNA polymerase subunit E' n=1 Tax=Methanopyrus
           kandleri RepID=Q8TVE1_METKA
          Length = 183

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 6/154 (3%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRH------GFVVAVTGIENI 285
           M+  + LE  +++ P  F  ++ D ++  L  DVEG            GFVV V  I ++
Sbjct: 1   MYELVELETTVRIPPTQFTSDVEDAVLKALENDVEGKLFREDDTGEPIGFVVFVDEILDV 60

Query: 286 GKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIP 465
               I  G G     V+++ +VFRP + E++   VT V + G F   GP+   +    I 
Sbjct: 61  ENEGIFPGDGASYHRVRFRALVFRPVEREVVVGEVTRVKEYGAFVRLGPLDGLLHVSQIL 120

Query: 466 DDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIG 567
           D+  +  G        +   ++++   +++ IIG
Sbjct: 121 DEYMYYDGAREALVGEETGRELKRGDVIKVMIIG 154

[192][TOP]
>UniRef100_Q2FTM9 DNA-directed RNA polymerase, subunit E' n=1 Tax=Methanospirillum
           hungatei JF-1 RepID=Q2FTM9_METHJ
          Length = 190

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 30/116 (25%), Positives = 55/116 (47%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M++ + L   +++ P   G +L   ++  L + +EG+     G  +AVT +  IG+G + 
Sbjct: 1   MYYRLELIDKVRVPPHRLGEDLTTVILDVLQEQLEGSIDKEIGIFIAVTKVLRIGEGEMV 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 471
            G G V + V ++ +  R    EI+E +V      G F   GP+   +    I D+
Sbjct: 61  PGDGAVYYDVDFEGLALRLSLQEIIEGIVVETTSFGAFVSLGPIDAMLHVSQISDE 116

[193][TOP]
>UniRef100_Q4SXE9 Chromosome undetermined SCAF12429, whole genome shotgun sequence.
           (Fragment) n=1 Tax=Tetraodon nigroviridis
           RepID=Q4SXE9_TETNG
          Length = 41

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGR 246
           MF+HI LE  + LHPRYFG NL + +  KL  +VEGTC+G+
Sbjct: 1   MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGK 41

[194][TOP]
>UniRef100_A6VJ74 DNA-directed RNA polymerase n=1 Tax=Methanococcus maripaludis C7
           RepID=A6VJ74_METM7
          Length = 187

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 31/147 (21%), Positives = 66/147 (44%)
 Frame = +1

Query: 124 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 303
           M+  + +   +++ P+ FG  L +N+   LM+  EG      GF++++  ++N+ +G I 
Sbjct: 1   MYKILKISDTVRIPPKMFGNPLSENVKRVLMEKYEGILDKDVGFILSIVDVDNVSEGSII 60

Query: 304 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 483
            G G      ++  + + P   E+++  +  V + G F   GP+   +    I DD    
Sbjct: 61  YGDGAAYHETEFNVLTYVPELQEVVDGEIVDVVEFGAFVRLGPLDGLIHISQIMDDFVSF 120

Query: 484 SGDMPNYTTSDGSVKIQKDSEVRLKII 564
                     +    ++K  +VR +I+
Sbjct: 121 DPKREAIIGKETGKVLEKGDKVRARIV 147

[195][TOP]
>UniRef100_A3MXN8 DNA-directed RNA polymerase, subunit E' n=1 Tax=Pyrobaculum
           calidifontis JCM 11548 RepID=A3MXN8_PYRCJ
          Length = 194

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 1/142 (0%)
 Frame = +1

Query: 145 ERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVT 324
           E  +++ P  FG+ L D  +++L    E       G+VVAV  ++   +G I  G G   
Sbjct: 9   EDYVRIPPSEFGKPLEDIALAQLKARYENRVVREVGYVVAVLSVKVKREGKIIFGDGGTY 68

Query: 325 FPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSN-HLIPDDMEFQSGDMPN 501
              ++  + F P  GE++E VV  V ++G     GP+  F++  H++ +   F      +
Sbjct: 69  HKARFTLLAFVPLDGEVVEGVVENVREVGMLVRIGPIVGFINKIHVMDEPNIFFDASTKS 128

Query: 502 YTTSDGSVKIQKDSEVRLKIIG 567
           Y       ++     VR +I G
Sbjct: 129 YIGERTRRRVSVGDIVRARITG 150