BB914344 ( RCE13884 )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BB914344  RCE13884
         (578 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_B9RRX0 RNA polymerase sigma factor rpoD, putative n=1 ...   175   3e-42
UniRef100_B9HE05 Predicted protein n=1 Tax=Populus trichocarpa R...   161   4e-38
UniRef100_Q710C2 Sigma factor (Fragment) n=1 Tax=Spinacia olerac...   157   6e-37
UniRef100_O22058 Plastid RNA polymerase sigma-subunit n=1 Tax=Ar...   157   6e-37
UniRef100_A7P4G3 Chromosome chr4 scaffold_6, whole genome shotgu...   156   1e-36
UniRef100_A5BHR4 Putative uncharacterized protein n=1 Tax=Vitis ...   156   1e-36
UniRef100_Q8L7P7 Sigma factor SigC n=1 Tax=Arabidopsis thaliana ...   155   2e-36
UniRef100_O24621 Sigma factor 3 n=1 Tax=Arabidopsis thaliana Rep...   155   2e-36
UniRef100_Q9MTH2 Sigma factor 3 n=1 Tax=Sinapis alba RepID=Q9MTH...   144   4e-33
UniRef100_A9RXT3 Plastid sigma facor SIG2 n=2 Tax=Physcomitrella...   103   1e-20
UniRef100_A9RTR4 Predicted protein n=1 Tax=Physcomitrella patens...   100   1e-19
UniRef100_Q6L565 Putative RNA polymerase sigma factor n=1 Tax=Or...    98   5e-19
UniRef100_Q6I5E7 Putative uncharacterized protein OSJNBa0022J22....    98   5e-19
UniRef100_B9SDA3 RNA polymerase sigma factor rpoD1, putative n=1...    98   5e-19
UniRef100_B9FLV6 Putative uncharacterized protein n=1 Tax=Oryza ...    98   5e-19
UniRef100_B8AX92 Putative uncharacterized protein n=1 Tax=Oryza ...    98   5e-19
UniRef100_Q710C3 Sigma factor n=1 Tax=Spinacia oleracea RepID=Q7...    95   3e-18
UniRef100_Q8GWC1 Putative plastid RNA polymerase sigma-subunit S...    94   1e-17
UniRef100_Q9MTH3 Sigma factor 2 n=1 Tax=Sinapis alba RepID=Q9MTH...    93   2e-17
UniRef100_B9IPZ1 Predicted protein n=1 Tax=Populus trichocarpa R...    93   2e-17
UniRef100_UPI000198388B PREDICTED: similar to SIGB (SIGMA FACTOR...    92   2e-17
UniRef100_A7PSL8 Chromosome chr6 scaffold_28, whole genome shotg...    92   2e-17
UniRef100_B1C762 RNA polymerase sigma factor n=1 Tax=Anaerofusti...    91   5e-17
UniRef100_O22455 Sigma factor 2 n=1 Tax=Arabidopsis thaliana Rep...    91   8e-17
UniRef100_O22056 F22O13.2 n=1 Tax=Arabidopsis thaliana RepID=O22...    91   8e-17
UniRef100_A9RTR6 Predicted protein n=1 Tax=Physcomitrella patens...    90   1e-16
UniRef100_B2UM02 RNA polymerase sigma factor n=1 Tax=Akkermansia...    89   2e-16
UniRef100_Q9Z7F0 RNA polymerase sigma factor rpoD n=1 Tax=Chlamy...    89   2e-16
UniRef100_B9I6F1 Predicted protein n=1 Tax=Populus trichocarpa R...    89   2e-16
UniRef100_Q821E0 RNA polymerase sigma factor n=1 Tax=Chlamydophi...    89   3e-16
UniRef100_Q5L4N8 RNA polymerase sigma factor n=1 Tax=Chlamydophi...    89   3e-16
UniRef100_Q256K4 RNA polymerase sigma factor n=1 Tax=Chlamydophi...    89   3e-16
UniRef100_Q59302 RNA polymerase sigma factor n=1 Tax=Chlamydophi...    89   3e-16
UniRef100_B8LQB0 Putative uncharacterized protein n=1 Tax=Picea ...    89   3e-16
UniRef100_B8LLW6 Putative uncharacterized protein n=1 Tax=Picea ...    89   3e-16
UniRef100_Q46GS6 RNA polymerase sigma factor n=1 Tax=Prochloroco...    88   5e-16
UniRef100_A2C0V5 RNA polymerase sigma factor n=1 Tax=Prochloroco...    88   5e-16
UniRef100_Q7U5C4 RNA polymerase sigma factor n=1 Tax=Synechococc...    87   9e-16
UniRef100_Q3AWQ6 RNA polymerase sigma factor n=1 Tax=Synechococc...    87   9e-16
UniRef100_Q3ALS7 RNA polymerase sigma factor n=1 Tax=Synechococc...    87   9e-16
UniRef100_Q0I8I7 RNA polymerase sigma factor n=1 Tax=Synechococc...    87   9e-16
UniRef100_A5GJC2 RNA polymerase sigma factor n=1 Tax=Synechococc...    87   9e-16
UniRef100_Q05YJ7 RNA polymerase sigma factor n=1 Tax=Synechococc...    87   9e-16
UniRef100_Q05RP2 RNA polymerase sigma factor n=1 Tax=Synechococc...    87   9e-16
UniRef100_D0CLH5 RNA polymerase sigma factor RpoD n=1 Tax=Synech...    87   9e-16
UniRef100_A4CRY9 RNA polymerase sigma factor n=1 Tax=Synechococc...    87   9e-16
UniRef100_A3Z5L5 RNA polymerase sigma factor n=1 Tax=Synechococc...    87   9e-16
UniRef100_A3YZH3 RNA polymerase sigma factor n=1 Tax=Synechococc...    87   9e-16
UniRef100_B1X5Q2 RNA polymerase sigma factor n=1 Tax=Paulinella ...    87   9e-16
UniRef100_Q7V2I0 RNA polymerase sigma factor n=1 Tax=Prochloroco...    86   2e-15
UniRef100_Q59965 RNA polymerase sigma factor n=1 Tax=Synechococc...    86   2e-15
UniRef100_Q31C37 RNA polymerase sigma factor n=1 Tax=Prochloroco...    86   2e-15
UniRef100_A8G3L2 RNA polymerase sigma factor n=1 Tax=Prochloroco...    86   2e-15
UniRef100_A3PBM1 RNA polymerase sigma factor n=1 Tax=Prochloroco...    86   2e-15
UniRef100_A2BVF8 RNA polymerase sigma factor n=1 Tax=Prochloroco...    86   2e-15
UniRef100_A2BPX8 RNA polymerase sigma factor n=1 Tax=Prochloroco...    86   2e-15
UniRef100_C4FPK7 RNA polymerase sigma factor n=1 Tax=Veillonella...    86   2e-15
UniRef100_C0V400 RNA polymerase sigma factor n=1 Tax=Veillonella...    86   2e-15
UniRef100_B9P0P2 RNA polymerase sigma factor n=1 Tax=Prochloroco...    86   2e-15
UniRef100_Q7V698 RNA polymerase sigma factor n=1 Tax=Prochloroco...    86   2e-15
UniRef100_C5CDI4 RNA polymerase sigma factor n=1 Tax=Kosmotoga o...    86   2e-15
UniRef100_B7KDV7 RNA polymerase sigma factor n=1 Tax=Cyanothece ...    86   2e-15
UniRef100_B0JGK3 RNA polymerase sigma factor n=1 Tax=Microcystis...    86   2e-15
UniRef100_A5GSD3 RNA polymerase sigma factor n=1 Tax=Synechococc...    86   2e-15
UniRef100_A2C7M0 RNA polymerase sigma factor n=1 Tax=Prochloroco...    86   2e-15
UniRef100_C7QR23 RNA polymerase, sigma 70 subunit, RpoD subfamil...    86   2e-15
UniRef100_B4AUJ5 RNA polymerase sigma factor n=1 Tax=Cyanothece ...    86   2e-15
UniRef100_B1PVV9 RNA polymerase sigma factor n=1 Tax=Microcystis...    86   2e-15
UniRef100_A8YBI5 RNA polymerase sigma factor n=1 Tax=Microcystis...    86   2e-15
UniRef100_P74565 RNA polymerase sigma factor rpoD n=1 Tax=Synech...    86   2e-15
UniRef100_P52322 RNA polymerase sigma factor rpoD1 n=1 Tax=Micro...    86   2e-15
UniRef100_B5ILG7 RNA polymerase sigma factor n=1 Tax=Cyanobium s...    86   3e-15
UniRef100_Q6MEU8 RNA polymerase sigma factor n=1 Tax=Candidatus ...    85   4e-15
UniRef100_B1WS32 RNA polymerase sigma factor n=1 Tax=Cyanothece ...    85   4e-15
UniRef100_Q4C7J7 RNA polymerase sigma factor n=1 Tax=Crocosphaer...    85   4e-15
UniRef100_C4PQ01 RNA polymerase sigma factor n=1 Tax=Chlamydia t...    85   4e-15
UniRef100_C4PNC5 RNA polymerase sigma factor n=1 Tax=Chlamydia t...    85   4e-15
UniRef100_A5Z979 RNA polymerase sigma factor n=1 Tax=Eubacterium...    85   4e-15
UniRef100_A3ISY9 RNA polymerase sigma factor n=1 Tax=Cyanothece ...    85   4e-15
UniRef100_P18333 RNA polymerase sigma factor rpoD n=4 Tax=Chlamy...    85   4e-15
UniRef100_B0AAF1 RNA polymerase sigma factor n=1 Tax=Clostridium...    85   5e-15
UniRef100_Q2JJL6 RNA polymerase sigma factor n=1 Tax=Synechococc...    84   6e-15
UniRef100_B4W0Y8 RNA polymerase sigma factor n=1 Tax=Microcoleus...    84   6e-15
UniRef100_Q9L4T2 RNA polymerase sigma factor n=1 Tax=Nostoc punc...    84   8e-15
UniRef100_Q10UV2 RNA polymerase sigma factor n=1 Tax=Trichodesmi...    84   8e-15
UniRef100_Q04T13 RNA polymerase sigma factor n=2 Tax=Leptospira ...    84   8e-15
UniRef100_B0CDC4 RNA polymerase sigma factor n=1 Tax=Acaryochlor...    84   8e-15
UniRef100_A5IMD4 RNA polymerase sigma factor n=2 Tax=Thermotoga ...    84   8e-15
UniRef100_C7IAE0 RNA polymerase, sigma 70 subunit, RpoD subfamil...    84   8e-15
UniRef100_B5VWQ7 RNA polymerase sigma factor n=1 Tax=Arthrospira...    84   8e-15
UniRef100_B4WPM0 RNA polymerase sigma factor n=1 Tax=Synechococc...    84   8e-15
UniRef100_A0ZJC3 RNA polymerase sigma factor n=1 Tax=Nodularia s...    84   8e-15
UniRef100_A0YTZ3 RNA polymerase sigma factor n=1 Tax=Lyngbya sp....    84   8e-15
UniRef100_P77994 RNA polymerase sigma factor rpoD n=1 Tax=Thermo...    84   8e-15
UniRef100_P26683 RNA polymerase sigma factor rpoD n=2 Tax=Nostoc...    84   8e-15
UniRef100_Q7VD88 RNA polymerase sigma factor n=1 Tax=Prochloroco...    84   1e-14
UniRef100_B9K8D5 RNA polymerase sigma factor n=1 Tax=Thermotoga ...    84   1e-14
UniRef100_A9BEB7 RNA polymerase sigma factor n=1 Tax=Prochloroco...    84   1e-14
UniRef100_C7IFS3 RNA polymerase, sigma 70 subunit, RpoD subfamil...    84   1e-14
UniRef100_Q8RWR8 Sigma factor protein n=1 Tax=Zea mays RepID=Q8R...    84   1e-14
UniRef100_C0PCY3 Putative uncharacterized protein n=1 Tax=Zea ma...    84   1e-14
UniRef100_Q2JS52 RNA polymerase sigma factor n=1 Tax=Synechococc...    83   1e-14
UniRef100_B5GE88 RNA polymerase sigma factor n=1 Tax=Streptomyce...    83   1e-14
UniRef100_UPI0001966A7F hypothetical protein SUBVAR_00647 n=1 Ta...    83   2e-14
UniRef100_Q5N3Q1 RNA polymerase sigma factor n=1 Tax=Synechococc...    83   2e-14
UniRef100_Q0AWU4 RNA polymerase sigma factor n=1 Tax=Syntrophomo...    83   2e-14
UniRef100_B8I6N1 RNA polymerase sigma factor n=1 Tax=Clostridium...    83   2e-14
UniRef100_C4EU48 RNA polymerase sigma factor n=1 Tax=Thermanaero...    83   2e-14
UniRef100_P56835 RNA polymerase sigma factor rpoD n=1 Tax=Chlamy...    83   2e-14
UniRef100_P38023 RNA polymerase sigma factor rpoD1 n=1 Tax=Synec...    83   2e-14
UniRef100_Q7NHG5 RNA polymerase sigma factor n=1 Tax=Gloeobacter...    82   2e-14
UniRef100_B3DW95 RNA polymerase sigma factor n=1 Tax=Methylacidi...    82   2e-14
UniRef100_Q84Q84 Os03g0271100 protein n=1 Tax=Oryza sativa Japon...    82   2e-14
UniRef100_Q10NF3 cDNA clone:J013116E16, full insert sequence n=1...    82   2e-14
UniRef100_C6JRK5 Putative uncharacterized protein Sb0010s016080 ...    82   2e-14
UniRef100_A3AGH1 Putative uncharacterized protein n=1 Tax=Oryza ...    82   2e-14
UniRef100_A2XF08 Putative uncharacterized protein n=1 Tax=Oryza ...    82   2e-14
UniRef100_UPI000051017F COG0568: DNA-directed RNA polymerase, si...    82   3e-14
UniRef100_Q8DL79 RNA polymerase sigma factor n=1 Tax=Thermosynec...    82   3e-14
UniRef100_B8HPM3 RNA polymerase sigma factor n=1 Tax=Cyanothece ...    82   3e-14
UniRef100_B0MPW5 RNA polymerase sigma factor n=1 Tax=Eubacterium...    82   3e-14
UniRef100_C5WQ19 Putative uncharacterized protein Sb01g039810 n=...    82   3e-14
UniRef100_P61540 RNA polymerase sigma factor rpoD n=2 Tax=Leptos...    82   3e-14
UniRef100_Q1G9X1 RNA polymerase sigma factor n=1 Tax=Lactobacill...    82   4e-14
UniRef100_A9B4B0 RNA polymerase sigma factor n=1 Tax=Herpetosiph...    82   4e-14
UniRef100_B9XH89 RNA polymerase sigma factor n=1 Tax=bacterium E...    82   4e-14
UniRef100_B0PFC0 RNA polymerase sigma factor n=1 Tax=Anaerotrunc...    82   4e-14
UniRef100_Q9SMV8 Putative sigma-like transcription factor (Fragm...    82   4e-14
UniRef100_Q9LD95 Sigma factor-like protein n=1 Tax=Arabidopsis t...    82   4e-14
UniRef100_C7RD98 RNA polymerase, sigma 70 subunit, RpoD subfamil...    81   5e-14
UniRef100_C2CG99 RNA polymerase sigma factor n=1 Tax=Anaerococcu...    81   5e-14
UniRef100_Q9ZPL2 Sigma factor SIG2A n=1 Tax=Zea mays RepID=Q9ZPL...    81   5e-14
UniRef100_C9M9L0 RNA polymerase major sigma factor n=1 Tax=Jonqu...    81   7e-14
UniRef100_C0EUX7 RNA polymerase sigma factor n=1 Tax=Eubacterium...    81   7e-14
UniRef100_A0QIP2 RNA polymerase sigma factor n=2 Tax=Mycobacteri...    80   9e-14
UniRef100_C5EQF6 RNA polymerase sigma factor n=1 Tax=Clostridial...    80   9e-14
UniRef100_C0CZ55 RNA polymerase sigma factor n=1 Tax=Clostridium...    80   9e-14
UniRef100_C0A975 RNA polymerase sigma factor n=1 Tax=Opitutaceae...    80   9e-14
UniRef100_A8S2E6 RNA polymerase sigma factor n=1 Tax=Clostridium...    80   9e-14
UniRef100_B9MTE1 Predicted protein n=1 Tax=Populus trichocarpa R...    80   9e-14
UniRef100_UPI0001B45B52 RNA polymerase sigma factor SigB n=1 Tax...    80   1e-13
UniRef100_B7ICM7 RNA polymerase sigma factor n=1 Tax=Thermosipho...    80   1e-13
UniRef100_B1ZQW8 RNA polymerase sigma factor n=1 Tax=Opitutus te...    80   1e-13
UniRef100_A6LLT9 RNA polymerase sigma factor n=1 Tax=Thermosipho...    80   1e-13
UniRef100_A1UF13 RNA polymerase sigma factor n=3 Tax=Mycobacteri...    80   1e-13
UniRef100_A8SMX7 RNA polymerase sigma factor n=1 Tax=Parvimonas ...    80   1e-13
UniRef100_B5JG90 RNA polymerase sigma factor n=1 Tax=Verrucomicr...    80   1e-13
UniRef100_A8UQQ5 RNA polymerase sigma factor n=1 Tax=Hydrogenivi...    80   1e-13
UniRef100_UPI00017F5605 RNA polymerase sigma factor (sigma-43) n...    79   2e-13
UniRef100_Q18BX5 RNA polymerase sigma factor n=1 Tax=Clostridium...    79   2e-13
UniRef100_B2V7P9 RNA polymerase sigma factor n=1 Tax=Sulfurihydr...    79   2e-13
UniRef100_A5UPS4 RNA polymerase sigma factor n=1 Tax=Roseiflexus...    79   2e-13
UniRef100_A4TCQ2 RNA polymerase sigma factor n=1 Tax=Mycobacteri...    79   2e-13
UniRef100_A1T7W4 RNA polymerase sigma factor n=1 Tax=Mycobacteri...    79   2e-13
UniRef100_A0QVZ5 RNA polymerase sigma factor n=1 Tax=Mycobacteri...    79   2e-13
UniRef100_C9XSQ7 RNA polymerase sigma factor (Sigma-43) n=2 Tax=...    79   2e-13
UniRef100_C4DZ35 RNA polymerase sigma factor n=1 Tax=Streptobaci...    79   2e-13
UniRef100_C1TLL9 RNA polymerase sigma factor n=1 Tax=Dethiosulfo...    79   2e-13
UniRef100_C0FDC5 RNA polymerase sigma factor n=1 Tax=Clostridium...    79   2e-13
UniRef100_C0D895 RNA polymerase sigma factor n=1 Tax=Clostridium...    79   2e-13
UniRef100_B4WFP5 RNA polymerase sigma factor n=1 Tax=Synechococc...    79   2e-13
UniRef100_B0VJJ6 RNA polymerase sigma factor n=1 Tax=Candidatus ...    79   2e-13
UniRef100_A6CE36 RNA polymerase sigma factor n=1 Tax=Planctomyce...    79   2e-13
UniRef100_Q39515 Chloroplast RNA polymerase sigma subunit n=1 Ta...    79   2e-13
UniRef100_UPI0001742EF6 RNA polymerase sigma factor RpoD n=1 Tax...    79   3e-13
UniRef100_Q04A25 RNA polymerase sigma factor n=1 Tax=Lactobacill...    79   3e-13
UniRef100_B0S1K1 RNA polymerase sigma factor n=1 Tax=Finegoldia ...    79   3e-13
UniRef100_A7GXY2 RNA polymerase sigma factor n=1 Tax=Campylobact...    79   3e-13
UniRef100_C7HUH1 RNA polymerase sigma factor RpoD n=1 Tax=Anaero...    79   3e-13
UniRef100_C2KW80 RNA polymerase sigma factor n=1 Tax=Oribacteriu...    79   3e-13
UniRef100_C2HGK9 RNA polymerase sigma factor n=1 Tax=Finegoldia ...    79   3e-13
UniRef100_C0CZA7 RNA polymerase sigma factor n=1 Tax=Clostridium...    79   3e-13
UniRef100_B6WAP8 RNA polymerase sigma factor n=1 Tax=Anaerococcu...    79   3e-13
UniRef100_C5YWX9 Putative uncharacterized protein Sb09g030350 n=...    79   3e-13
UniRef100_UPI0001B55E40 RNA polymerase principal sigma factor n=...    79   3e-13
UniRef100_Q8RE13 RNA polymerase sigma factor n=1 Tax=Fusobacteri...    79   3e-13
UniRef100_Q6A8Y2 RNA polymerase sigma factor n=1 Tax=Propionibac...    79   3e-13
UniRef100_Q47MZ7 RNA polymerase sigma factor n=1 Tax=Thermobifid...    79   3e-13
UniRef100_O67464 RNA polymerase sigma factor n=1 Tax=Aquifex aeo...    79   3e-13
UniRef100_A7NS26 RNA polymerase sigma factor n=1 Tax=Roseiflexus...    79   3e-13
UniRef100_Q069K1 RNA polymerase sigma factor (Fragment) n=1 Tax=...    79   3e-13
UniRef100_D0BQ42 RNA polymerase sigma factor RpoS n=1 Tax=Fusoba...    79   3e-13
UniRef100_C8PRS2 RNA polymerase sigma factor RpoD n=1 Tax=Trepon...    79   3e-13
UniRef100_C7XNV3 RNA polymerase sigma factor RpoS n=1 Tax=Fusoba...    79   3e-13
UniRef100_C7NIP6 RNA polymerase sigma factor RpoD, C-terminal do...    79   3e-13
UniRef100_C7H329 RNA polymerase sigma factor RpoD n=1 Tax=Faecal...    79   3e-13
UniRef100_C4EHY7 RNA polymerase sigma factor n=1 Tax=Streptospor...    79   3e-13
UniRef100_C3WX07 RNA polymerase sigma factor n=1 Tax=Fusobacteri...    79   3e-13
UniRef100_C3WPP3 RNA polymerase sigma factor n=2 Tax=Fusobacteri...    79   3e-13
UniRef100_C2APA0 RNA polymerase sigma factor n=1 Tax=Tsukamurell...    79   3e-13
UniRef100_A6C4Z7 RNA polymerase sigma factor n=1 Tax=Planctomyce...    79   3e-13
UniRef100_UPI0001B58A0C RNA polymerase sigma factor n=1 Tax=Stre...    78   4e-13
UniRef100_UPI0001B5683C RNA polymerase sigma factor n=1 Tax=Stre...    78   4e-13
UniRef100_UPI0001B51DD8 RNA polymerase sigma factor n=1 Tax=Stre...    78   4e-13
UniRef100_UPI0001B51157 RNA polymerase sigma factor n=1 Tax=Stre...    78   4e-13
UniRef100_UPI0001B506AC RNA polymerase sigma factor n=1 Tax=Stre...    78   4e-13
UniRef100_UPI0001AF41E8 RNA polymerase sigma factor SigB n=1 Tax...    78   4e-13
UniRef100_UPI0001AF2BE0 RNA polymerase sigma factor n=1 Tax=Stre...    78   4e-13
UniRef100_UPI0001AEF84E RNA polymerase sigma factor n=1 Tax=Stre...    78   4e-13
UniRef100_UPI00017F508B RNA polymerase sigma factor rpoD n=1 Tax...    78   4e-13
UniRef100_Q82KF9 RNA polymerase sigma factor n=1 Tax=Streptomyce...    78   4e-13
UniRef100_C5CCM1 RNA polymerase sigma factor n=1 Tax=Micrococcus...    78   4e-13
UniRef100_B8ZQV3 RNA polymerase sigma factor n=2 Tax=Mycobacteri...    78   4e-13
UniRef100_A9B077 RNA polymerase sigma factor n=1 Tax=Herpetosiph...    78   4e-13
UniRef100_Q9R5W0 RNA polymerase sigma factor n=1 Tax=Streptomyce...    78   4e-13
UniRef100_Q59913 RNA polymerase sigma factor n=2 Tax=Streptomyce...    78   4e-13
UniRef100_Q59813 RNA polymerase sigma factor n=1 Tax=Streptomyce...    78   4e-13
UniRef100_C9Z0K3 Major vegetative sigma factor HrdB n=1 Tax=Stre...    78   4e-13
UniRef100_C9NBA0 RNA polymerase, sigma 70 subunit, RpoD subfamil...    78   4e-13
UniRef100_C8PE38 RNA polymerase sigma factor RpoD n=1 Tax=Campyl...    78   4e-13
UniRef100_C8PAI1 RNA polymerase sigma factor rpoD n=1 Tax=Lactob...    78   4e-13
UniRef100_C7GZY7 RNA polymerase sigma factor RpoD n=1 Tax=Eubact...    78   4e-13
UniRef100_C6JI10 RNA polymerase sigma factor n=1 Tax=Fusobacteri...    78   4e-13
UniRef100_C4CIZ0 RNA polymerase sigma factor n=1 Tax=Sphaerobact...    78   4e-13
UniRef100_C2BII3 RNA polymerase sigma factor n=1 Tax=Anaerococcu...    78   4e-13
UniRef100_B5GW69 RNA polymerase sigma factor n=1 Tax=Streptomyce...    78   4e-13
UniRef100_B5G756 RNA polymerase sigma factor n=1 Tax=Streptomyce...    78   4e-13
UniRef100_B4VFQ3 RNA polymerase sigma factor n=1 Tax=Streptomyce...    78   4e-13
UniRef100_P77951 RNA polymerase principal sigma factor hrdB n=2 ...    78   4e-13
UniRef100_P18183 RNA polymerase principal sigma factor hrdB n=2 ...    78   4e-13
UniRef100_Q892T0 RNA polymerase sigma factor n=1 Tax=Clostridium...    78   6e-13
UniRef100_C0QRZ3 RNA polymerase sigma factor n=1 Tax=Persephonel...    78   6e-13
UniRef100_A7NG03 RNA polymerase sigma factor n=1 Tax=Roseiflexus...    78   6e-13
UniRef100_A6W880 RNA polymerase sigma factor n=1 Tax=Kineococcus...    78   6e-13
UniRef100_A5UQ16 RNA polymerase sigma factor n=1 Tax=Roseiflexus...    78   6e-13
UniRef100_A0Q1P4 RNA polymerase sigma factor n=1 Tax=Clostridium...    78   6e-13
UniRef100_P77906 RNA polymerase sigma factor n=1 Tax=Mycobacteri...    78   6e-13
UniRef100_C9KB66 RNA polymerase, sigma 70 subunit, RpoD n=1 Tax=...    78   6e-13
UniRef100_C7R4M2 RNA polymerase, sigma 70 subunit, RpoD subfamil...    78   6e-13
UniRef100_C7QCX2 RNA polymerase, sigma 70 subunit, RpoD subfamil...    78   6e-13
UniRef100_C7MCF9 RNA polymerase, sigma 70 subunit, RpoD n=1 Tax=...    78   6e-13
UniRef100_C5VRR6 RNA polymerase sigma factor n=1 Tax=Clostridium...    78   6e-13
UniRef100_C4FZZ1 RNA polymerase sigma factor n=1 Tax=Abiotrophia...    78   6e-13
UniRef100_C2ADB9 RNA polymerase sigma factor n=1 Tax=Thermomonos...    78   6e-13
UniRef100_C1ZAZ0 RNA polymerase sigma factor n=1 Tax=Planctomyce...    78   6e-13
UniRef100_C1WS55 RNA polymerase sigma factor n=1 Tax=Kribbella f...    78   6e-13
UniRef100_C0V8H1 RNA polymerase sigma factor n=1 Tax=Xylanimonas...    78   6e-13
UniRef100_C0GBZ7 RNA polymerase sigma factor n=1 Tax=Dethiobacte...    78   6e-13
UniRef100_B1BDC8 RNA polymerase sigma factor n=1 Tax=Clostridium...    78   6e-13
UniRef100_A7BDF7 RNA polymerase sigma factor n=1 Tax=Actinomyces...    78   6e-13
UniRef100_A5WQW2 RNA polymerase sigma factor n=9 Tax=Mycobacteri...    78   6e-13
UniRef100_A0ZIW0 RNA polymerase sigma factor n=1 Tax=Nodularia s...    78   6e-13
UniRef100_Q9ZPL1 Sigma factor SIG2B n=1 Tax=Zea mays RepID=Q9ZPL...    78   6e-13
UniRef100_Q3AEW8 RNA polymerase sigma factor n=1 Tax=Carboxydoth...    77   7e-13
UniRef100_A7ZE90 RNA polymerase sigma factor n=1 Tax=Campylobact...    77   7e-13
UniRef100_A7HK63 RNA polymerase sigma factor n=1 Tax=Fervidobact...    77   7e-13
UniRef100_Q59553 RNA polymerase sigma factor n=1 Tax=Mycobacteri...    77   7e-13
UniRef100_B1XNJ6 RNA polymerase sigma factor n=2 Tax=Synechococc...    77   7e-13
UniRef100_C9KGU4 RNA polymerase sigma factor RpoD, C-terminal do...    77   7e-13
UniRef100_C6PTX7 RNA polymerase sigma factor n=1 Tax=Clostridium...    77   7e-13
UniRef100_C6P8V1 RNA polymerase sigma factor n=1 Tax=Thermoanaer...    77   7e-13
UniRef100_C3WID8 RNA polymerase sigma factor n=1 Tax=Fusobacteri...    77   7e-13
UniRef100_C3WG18 RNA polymerase sigma factor n=1 Tax=Fusobacteri...    77   7e-13
UniRef100_C1YV99 RNA polymerase sigma factor n=1 Tax=Nocardiopsi...    77   7e-13
UniRef100_B6FWI1 RNA polymerase sigma factor n=1 Tax=Clostridium...    77   7e-13
UniRef100_A5I618 RNA polymerase sigma factor n=9 Tax=Clostridium...    77   7e-13
UniRef100_Q9ZPL0 Sigma factor SIG6 n=1 Tax=Zea mays RepID=Q9ZPL0...    77   7e-13
UniRef100_B4FJ30 Putative uncharacterized protein n=1 Tax=Zea ma...    77   7e-13
UniRef100_A4RYI5 Predicted protein n=1 Tax=Ostreococcus lucimari...    77   7e-13
UniRef100_C5C5I2 RNA polymerase sigma factor n=1 Tax=Beutenbergi...    77   1e-12
UniRef100_A3DDV0 RNA polymerase sigma factor n=1 Tax=Clostridium...    77   1e-12
UniRef100_A1SKY0 RNA polymerase sigma factor n=1 Tax=Nocardioide...    77   1e-12
UniRef100_C9LLN1 RNA polymerase sigma factor RpoD n=1 Tax=Dialis...    77   1e-12
UniRef100_C7HEX3 RNA polymerase, sigma 70 subunit, RpoD subfamil...    77   1e-12
UniRef100_C5RE54 RNA polymerase sigma factor n=1 Tax=Clostridium...    77   1e-12
UniRef100_C5EJF9 RNA polymerase sigma factor n=1 Tax=Clostridial...    77   1e-12
UniRef100_C4CH81 RNA polymerase sigma factor n=1 Tax=Sphaerobact...    77   1e-12
UniRef100_C0W1T8 RNA polymerase sigma factor n=1 Tax=Actinomyces...    77   1e-12
UniRef100_A8S616 RNA polymerase sigma factor n=1 Tax=Faecalibact...    77   1e-12
UniRef100_A5TTP9 RNA polymerase sigma factor n=1 Tax=Fusobacteri...    77   1e-12
UniRef100_Q8S9D0 RNA polymerase sigma factor n=1 Tax=Guillardia ...    77   1e-12
UniRef100_Q7XXT0 Plastid sigma factor 2A n=1 Tax=Oryza sativa Ja...    77   1e-12
UniRef100_Q53KH8 Os11g0448400 protein n=1 Tax=Oryza sativa Japon...    77   1e-12
UniRef100_Q53JE7 Putative uncharacterized protein n=1 Tax=Oryza ...    77   1e-12
UniRef100_B8AUZ3 Putative uncharacterized protein n=1 Tax=Oryza ...    77   1e-12
UniRef100_A9BK56 RpoD n=1 Tax=Cryptophyta RepID=A9BK56_9CRYP           77   1e-12
UniRef100_P33656 RNA polymerase sigma factor rpoD n=1 Tax=Clostr...    77   1e-12
UniRef100_Q8R970 RNA polymerase sigma factor n=1 Tax=Thermoanaer...    77   1e-12
UniRef100_B1XMU3 RNA polymerase sigma factor n=1 Tax=Synechococc...    77   1e-12
UniRef100_Q71HU9 RNA polymerase sigma factor (Fragment) n=1 Tax=...    77   1e-12
UniRef100_Q4HQG2 RNA polymerase sigma factor n=1 Tax=Campylobact...    77   1e-12
UniRef100_C9MZ09 RNA polymerase sigma factor RpoD n=1 Tax=Leptot...    77   1e-12
UniRef100_C6Q7U2 RNA polymerase sigma factor n=1 Tax=Thermoanaer...    77   1e-12
UniRef100_B0K6Y0 RNA polymerase sigma factor n=6 Tax=Thermoanaer...    77   1e-12
UniRef100_C5EQH6 RNA polymerase sigma factor n=1 Tax=Clostridial...    77   1e-12
UniRef100_C4C6T9 RNA polymerase sigma factor n=1 Tax=Sebaldella ...    77   1e-12
UniRef100_C0EE25 RNA polymerase sigma factor n=1 Tax=Clostridium...    77   1e-12
UniRef100_B5CM66 RNA polymerase sigma factor n=1 Tax=Ruminococcu...    77   1e-12
UniRef100_B1QWY9 RNA polymerase sigma factor n=2 Tax=Clostridium...    77   1e-12
UniRef100_B0ABJ4 RNA polymerase sigma factor n=1 Tax=Clostridium...    77   1e-12
UniRef100_UPI0001AEE245 RNA polymerase sigma factor n=1 Tax=Stre...    76   2e-12
UniRef100_Q5YT68 RNA polymerase sigma factor n=1 Tax=Nocardia fa...    76   2e-12
UniRef100_Q18C16 RNA polymerase sigma factor n=2 Tax=Clostridium...    76   2e-12
UniRef100_B8G6G0 RNA polymerase sigma factor n=1 Tax=Chloroflexu...    76   2e-12
UniRef100_B2TMC7 RNA polymerase sigma factor n=1 Tax=Clostridium...    76   2e-12
UniRef100_B2GJ78 RNA polymerase sigma factor n=1 Tax=Kocuria rhi...    76   2e-12
UniRef100_B0SHG5 RNA polymerase sigma factor n=2 Tax=Leptospira ...    76   2e-12
UniRef100_A9WGV1 RNA polymerase sigma factor n=2 Tax=Chloroflexu...    76   2e-12
UniRef100_A8F8P3 RNA polymerase sigma factor n=1 Tax=Thermotoga ...    76   2e-12
UniRef100_A6LRQ7 RNA polymerase sigma factor n=1 Tax=Clostridium...    76   2e-12
UniRef100_A5N6R2 RNA polymerase sigma factor n=2 Tax=Clostridium...    76   2e-12
UniRef100_P96035 RNA polymerase sigma factor n=1 Tax=Synechococc...    76   2e-12
UniRef100_C9XJA1 RNA polymerase sigma factor rpoD n=2 Tax=Clostr...    76   2e-12
UniRef100_C9R939 RNA polymerase, sigma 70 subunit, RpoD subfamil...    76   2e-12
UniRef100_C7NC70 RNA polymerase, sigma 70 subunit, RpoD subfamil...    76   2e-12
UniRef100_C6R470 RNA polymerase sigma factor n=1 Tax=Rothia muci...    76   2e-12
UniRef100_C6PMA8 RNA polymerase sigma factor n=1 Tax=Thermoanaer...    76   2e-12
UniRef100_B2V2K8 RNA polymerase sigma factor n=2 Tax=Clostridium...    76   2e-12
UniRef100_C4E7G5 RNA polymerase sigma factor n=1 Tax=Streptospor...    76   2e-12
UniRef100_B9YR14 RNA polymerase sigma factor n=1 Tax='Nostoc azo...    76   2e-12
UniRef100_B9CNX8 RNA polymerase sigma factor n=1 Tax=Atopobium r...    76   2e-12
UniRef100_A7VZA6 RNA polymerase sigma factor n=1 Tax=Clostridium...    76   2e-12
UniRef100_Q98RZ3 RNA-polymerase sigma factor n=1 Tax=Guillardia ...    76   2e-12
UniRef100_UPI0001983B83 PREDICTED: hypothetical protein n=1 Tax=...    76   2e-12
UniRef100_C4L3Z9 RNA polymerase sigma factor n=1 Tax=Exiguobacte...    76   2e-12
UniRef100_C1DV68 RNA polymerase sigma factor n=1 Tax=Sulfurihydr...    76   2e-12
UniRef100_B2HLY9 RNA polymerase sigma factor n=1 Tax=Mycobacteri...    76   2e-12
UniRef100_A0PT65 RNA polymerase sigma factor n=1 Tax=Mycobacteri...    76   2e-12
UniRef100_A0LUU2 RNA polymerase sigma factor n=1 Tax=Acidothermu...    76   2e-12
UniRef100_C4FHX0 RNA polymerase sigma factor n=1 Tax=Sulfurihydr...    76   2e-12
UniRef100_C1IAB3 RNA polymerase sigma factor n=1 Tax=Clostridium...    76   2e-12
UniRef100_B5H8U7 RNA polymerase sigma factor n=1 Tax=Streptomyce...    76   2e-12
UniRef100_B4CWV6 RNA polymerase sigma factor n=1 Tax=Chthoniobac...    76   2e-12
UniRef100_A8S2D4 RNA polymerase sigma factor n=1 Tax=Clostridium...    76   2e-12
UniRef100_A7PT61 Chromosome chr8 scaffold_29, whole genome shotg...    76   2e-12
UniRef100_UPI0001693157 RNA polymerase sigma factor RpoD n=1 Tax...    75   3e-12
UniRef100_Q5WHD0 RNA polymerase sigma factor n=1 Tax=Bacillus cl...    75   3e-12
UniRef100_B8HH10 RNA polymerase sigma factor n=1 Tax=Arthrobacte...    75   3e-12
UniRef100_B8CXH1 RNA polymerase sigma factor n=1 Tax=Halothermot...    75   3e-12
UniRef100_B2IV51 RNA polymerase sigma factor n=1 Tax=Nostoc punc...    75   3e-12
UniRef100_A1R5K9 RNA polymerase sigma factor n=1 Tax=Arthrobacte...    75   3e-12
UniRef100_A0JVE1 RNA polymerase sigma factor n=1 Tax=Arthrobacte...    75   3e-12
UniRef100_A9WS22 RNA polymerase sigma factor n=2 Tax=Renibacteri...    75   3e-12
UniRef100_C8WGN9 RNA polymerase, sigma 70 subunit, RpoD subfamil...    75   3e-12
UniRef100_C7N4Z8 RNA polymerase sigma factor RpoD, C-terminal do...    75   3e-12
UniRef100_C4EN68 RNA polymerase sigma factor n=1 Tax=Streptospor...    75   3e-12
UniRef100_C1QEG0 RNA polymerase sigma factor n=1 Tax=Brachyspira...    75   3e-12
UniRef100_C0CQD9 RNA polymerase sigma factor n=1 Tax=Blautia hyd...    75   3e-12
UniRef100_B9YB48 RNA polymerase sigma factor n=1 Tax=Holdemania ...    75   3e-12
UniRef100_A7AZ88 RNA polymerase sigma factor n=1 Tax=Ruminococcu...    75   3e-12
UniRef100_A5KQA4 RNA polymerase sigma factor n=1 Tax=Ruminococcu...    75   3e-12
UniRef100_Q017N3 SigA (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01...    75   3e-12
UniRef100_B9S0J0 RNA polymerase sigma factor rpoD, putative n=1 ...    75   3e-12
UniRef100_O83506 RNA polymerase sigma factor rpoD n=2 Tax=Trepon...    75   3e-12
UniRef100_Q7UQG1 Transcription initiation factor sigma 70 n=1 Ta...    75   4e-12
UniRef100_Q2JT33 RNA polymerase sigma factor n=1 Tax=Synechococc...    75   4e-12
UniRef100_B4U677 RNA polymerase sigma factor n=1 Tax=Hydrogenoba...    75   4e-12
UniRef100_B1I1U1 RNA polymerase sigma factor n=1 Tax=Candidatus ...    75   4e-12
UniRef100_Q8VM94 RNA polymerase sigma factor n=1 Tax=Rhodococcus...    75   4e-12
UniRef100_C9N712 RNA polymerase, sigma 70 subunit, RpoD subfamil...    75   4e-12
UniRef100_C1TPF1 RNA polymerase sigma factor n=1 Tax=Dethiosulfo...    75   4e-12
UniRef100_A3TJR3 RNA polymerase sigma factor n=1 Tax=Janibacter ...    75   4e-12
UniRef100_UPI00017446E0 RNA polymerase sigma factor RpoD n=1 Tax...    75   5e-12
UniRef100_Q24T06 RNA polymerase sigma factor n=1 Tax=Desulfitoba...    75   5e-12
UniRef100_B9MQ36 RNA polymerase sigma factor n=1 Tax=Anaerocellu...    75   5e-12
UniRef100_B8FTY1 RNA polymerase sigma factor n=1 Tax=Desulfitoba...    75   5e-12
UniRef100_A4XHW4 RNA polymerase sigma factor n=1 Tax=Caldicellul...    75   5e-12
UniRef100_A0RNC8 RNA polymerase sigma factor n=1 Tax=Campylobact...    75   5e-12
UniRef100_Q2B288 RNA polymerase sigma factor n=1 Tax=Bacillus sp...    75   5e-12
UniRef100_P77870 RNA polymerase sigma factor n=1 Tax=Heliobacill...    75   5e-12
UniRef100_C2D7B9 RNA polymerase sigma factor n=1 Tax=Atopobium v...    75   5e-12
UniRef100_C1PEH1 RNA polymerase sigma factor n=1 Tax=Bacillus co...    75   5e-12
UniRef100_C0W357 RNA polymerase sigma factor n=1 Tax=Actinomyces...    75   5e-12
UniRef100_C0UV59 RNA polymerase sigma factor n=1 Tax=Thermobacul...    75   5e-12
UniRef100_C0FBN4 RNA polymerase sigma factor n=1 Tax=Clostridium...    75   5e-12
UniRef100_B0NBC7 RNA polymerase sigma factor n=1 Tax=Clostridium...    75   5e-12
UniRef100_A8RMR2 RNA polymerase sigma factor n=1 Tax=Clostridium...    75   5e-12
UniRef100_Q84LK8 Os08g0242800 protein n=1 Tax=Oryza sativa Japon...    75   5e-12
UniRef100_B8BC85 Putative uncharacterized protein n=1 Tax=Oryza ...    75   5e-12
UniRef100_A3BR19 Putative uncharacterized protein n=1 Tax=Oryza ...    75   5e-12
UniRef100_UPI0001977D18 RNA polymerase sigma factor RpoD n=1 Tax...    74   6e-12
UniRef100_C9KNX0 RNA polymerase sigma factor RpoD n=1 Tax=Mitsuo...    74   6e-12
UniRef100_C8W3K2 RNA polymerase, sigma 70 subunit, RpoD subfamil...    74   6e-12
UniRef100_C6JGK6 RNA polymerase sigma factor n=1 Tax=Ruminococcu...    74   6e-12
UniRef100_C4CLA1 RNA polymerase sigma factor n=1 Tax=Sphaerobact...    74   6e-12
UniRef100_C0ET20 RNA polymerase sigma factor n=1 Tax=Eubacterium...    74   6e-12
UniRef100_B7AQM8 RNA polymerase sigma factor n=1 Tax=Bacteroides...    74   6e-12
UniRef100_UPI0001B562EA RNA polymerase sigma factor n=1 Tax=Stre...    74   8e-12
UniRef100_UPI0001AF1489 RNA polymerase sigma factor n=1 Tax=Stre...    74   8e-12
UniRef100_UPI00016C0A4F RNA polymerase, sigma 70 subunit, RpoD f...    74   8e-12
UniRef100_Q73P62 RNA polymerase sigma factor n=1 Tax=Treponema d...    74   8e-12
UniRef100_Q67RX0 RNA polymerase sigma factor n=1 Tax=Symbiobacte...    74   8e-12
UniRef100_Q47RL2 RNA polymerase sigma factor n=1 Tax=Thermobifid...    74   8e-12
UniRef100_Q2JIA4 RNA polymerase sigma factor n=1 Tax=Synechococc...    74   8e-12
UniRef100_C4Z4Y6 RNA polymerase sigma factor n=1 Tax=Eubacterium...    74   8e-12
UniRef100_B9KZ85 RNA polymerase sigma factor n=1 Tax=Thermomicro...    74   8e-12
UniRef100_B9KCQ5 RNA polymerase sigma factor n=1 Tax=Campylobact...    74   8e-12
UniRef100_B1YL80 RNA polymerase sigma factor n=1 Tax=Exiguobacte...    74   8e-12
UniRef100_B1MCY5 RNA polymerase sigma factor n=1 Tax=Mycobacteri...    74   8e-12
UniRef100_A6QAZ8 RNA polymerase sigma factor n=1 Tax=Sulfurovum ...    74   8e-12
UniRef100_A5D3U6 RNA polymerase sigma factor n=1 Tax=Pelotomacul...    74   8e-12
UniRef100_Q59814 RNA polymerase sigma factor n=1 Tax=Streptomyce...    74   8e-12
UniRef100_C8W713 RNA polymerase, sigma 70 subunit, RpoD subfamil...    74   8e-12
UniRef100_C5ZWP6 RNA polymerase sigma factor n=1 Tax=Helicobacte...    74   8e-12
UniRef100_C4VL08 RNA polymerase sigma factor n=3 Tax=Lactobacill...    74   8e-12
UniRef100_C4V564 RNA polymerase sigma factor n=1 Tax=Selenomonas...    74   8e-12
UniRef100_C4G971 RNA polymerase sigma factor n=1 Tax=Shuttlewort...    74   8e-12
UniRef100_C2E1K8 RNA polymerase sigma factor n=3 Tax=Lactobacill...    74   8e-12
UniRef100_C0C397 RNA polymerase sigma factor n=1 Tax=Clostridium...    74   8e-12
UniRef100_B4V2D8 RNA polymerase sigma factor (Fragment) n=1 Tax=...    74   8e-12
UniRef100_A6BEL2 RNA polymerase sigma factor n=1 Tax=Dorea longi...    74   8e-12
UniRef100_A1HPB3 RNA polymerase sigma factor n=1 Tax=Thermosinus...    74   8e-12
UniRef100_B8C8Z6 Predicted protein (Fragment) n=1 Tax=Thalassios...    74   8e-12
UniRef100_Q2RKT5 RNA polymerase sigma factor n=1 Tax=Moorella th...    74   1e-11
UniRef100_C5D4R8 RNA polymerase sigma factor n=1 Tax=Geobacillus...    74   1e-11
UniRef100_B9DNN2 RNA polymerase sigma factor n=1 Tax=Staphylococ...    74   1e-11
UniRef100_B7GH73 RNA polymerase sigma factor n=1 Tax=Anoxybacill...    74   1e-11
UniRef100_B0TG57 RNA polymerase sigma factor n=1 Tax=Heliobacter...    74   1e-11
UniRef100_Q4HEV2 RNA polymerase sigma factor n=1 Tax=Campylobact...    74   1e-11
UniRef100_Q1PW65 RNA polymerase sigma factor n=1 Tax=Candidatus ...    74   1e-11
UniRef100_O52921 RNA polymerase sigma factor n=1 Tax=Campylobact...    74   1e-11
UniRef100_C7MNW8 RNA polymerase sigma factor RpoD, C-terminal do...    74   1e-11
UniRef100_C6QPZ7 RNA polymerase sigma factor n=1 Tax=Geobacillus...    74   1e-11
UniRef100_C5NX65 RNA polymerase sigma factor n=1 Tax=Gemella hae...    74   1e-11
UniRef100_C3XP94 RNA polymerase sigma factor (Fragment) n=1 Tax=...    74   1e-11
UniRef100_C9RYK5 RNA polymerase, sigma 70 subunit, RpoD subfamil...    74   1e-11
UniRef100_C0BBA6 RNA polymerase sigma factor n=1 Tax=Coprococcus...    74   1e-11
UniRef100_A4IR10 RNA polymerase sigma factor n=2 Tax=Geobacillus...    74   1e-11
UniRef100_A8SUG1 RNA polymerase sigma factor n=1 Tax=Coprococcus...    74   1e-11
UniRef100_A1VZY9 RNA polymerase sigma factor n=6 Tax=Campylobact...    74   1e-11
UniRef100_A3YN28 RNA polymerase sigma factor n=4 Tax=Campylobact...    74   1e-11
UniRef100_UPI0001AEF979 putative RNA polymerase principal sigma ...    73   1e-11
UniRef100_UPI0001694293 RNA polymerase sigma factor RpoD n=1 Tax...    73   1e-11
UniRef100_Q0SRH3 RNA polymerase sigma factor n=8 Tax=Clostridium...    73   1e-11
UniRef100_Q74IZ4 RNA polymerase sigma factor n=1 Tax=Lactobacill...    73   1e-11
UniRef100_Q4JVA6 RNA polymerase sigma factor n=1 Tax=Corynebacte...    73   1e-11
UniRef100_Q0S1K1 RNA polymerase sigma factor n=1 Tax=Rhodococcus...    73   1e-11
UniRef100_C6CTW1 RNA polymerase sigma factor n=1 Tax=Paenibacill...    73   1e-11
UniRef100_C0R030 RNA polymerase sigma factor n=1 Tax=Brachyspira...    73   1e-11
UniRef100_B1VDG3 RNA polymerase sigma factor n=1 Tax=Corynebacte...    73   1e-11
UniRef100_Q0TNV3 RNA polymerase sigma factor n=2 Tax=Clostridium...    73   1e-11
UniRef100_Q6J2R2 RNA polymerase sigma factor (Fragment) n=2 Tax=...    73   1e-11
UniRef100_C9LTA9 RNA polymerase sigma factor RpoD n=1 Tax=Seleno...    73   1e-11
UniRef100_C8RTJ4 RNA polymerase principal sigma factor SigA n=1 ...    73   1e-11
UniRef100_C7ZXE7 Transcription initiation factor sigma plaC n=1 ...    73   1e-11
UniRef100_C6RFN1 RNA polymerase sigma factor n=1 Tax=Campylobact...    73   1e-11
UniRef100_C5EYF0 RNA polymerase sigma factor n=1 Tax=Helicobacte...    73   1e-11
UniRef100_C2E6R7 RNA polymerase sigma factor n=1 Tax=Lactobacill...    73   1e-11
UniRef100_C2AAT6 RNA polymerase sigma factor n=1 Tax=Thermomonos...    73   1e-11
UniRef100_Q042Y7 RNA polymerase sigma factor n=3 Tax=Lactobacill...    73   1e-11
UniRef100_C8WY27 RNA polymerase, sigma 70 subunit, RpoD subfamil...    73   1e-11
UniRef100_B4W1N4 RNA polymerase sigma factor n=1 Tax=Microcoleus...    73   1e-11
UniRef100_B3YVL5 RNA polymerase sigma factor n=1 Tax=Bacillus ce...    73   1e-11
UniRef100_B0AB34 RNA polymerase sigma factor n=1 Tax=Clostridium...    73   1e-11
UniRef100_A8RBC2 RNA polymerase sigma factor n=1 Tax=Eubacterium...    73   1e-11
UniRef100_A0NJA0 RNA polymerase sigma factor n=2 Tax=Oenococcus ...    73   1e-11
UniRef100_Q99TT5 RNA polymerase sigma factor rpoD n=1 Tax=Staphy...    73   1e-11
UniRef100_C0UQ44 RNA polymerase sigma factor n=2 Tax=Gordonia br...    73   2e-11
UniRef100_UPI0001B58588 RNA polymerase sigma factor n=1 Tax=Stre...    73   2e-11
UniRef100_UPI0001789970 RNA polymerase, sigma 70 subunit, RpoD s...    73   2e-11
UniRef100_UPI00016C45A8 transcription initiation factor sigma 70...    73   2e-11
UniRef100_Q8EPY6 RNA polymerase sigma factor n=1 Tax=Oceanobacil...    73   2e-11
UniRef100_Q7NP54 RNA polymerase sigma factor n=1 Tax=Gloeobacter...    73   2e-11
UniRef100_Q7NKZ2 RNA polymerase sigma factor n=1 Tax=Gloeobacter...    73   2e-11
UniRef100_Q1ATP3 RNA polymerase sigma factor n=1 Tax=Rubrobacter...    73   2e-11
UniRef100_B9E6V2 RNA polymerase sigma factor n=1 Tax=Macrococcus...    73   2e-11
UniRef100_A9F3S6 RNA polymerase sigma factor n=1 Tax=Sorangium c...    73   2e-11
UniRef100_A7H340 RNA polymerase sigma factor n=1 Tax=Campylobact...    73   2e-11
UniRef100_A6TSG9 RNA polymerase sigma factor n=1 Tax=Alkaliphilu...    73   2e-11
UniRef100_Q8GLL3 RNA polymerase sigma factor n=1 Tax=Bifidobacte...    73   2e-11
UniRef100_Q693W1 RNA polymerase sigma factor n=1 Tax=Streptomyce...    73   2e-11
UniRef100_P77842 RNA polymerase sigma factor n=1 Tax=Chloroflexu...    73   2e-11
UniRef100_O08332 RNA polymerase sigma factor n=1 Tax=Staphylococ...    73   2e-11
UniRef100_C9L8C6 RNA polymerase sigma factor RpoD n=1 Tax=Blauti...    73   2e-11
UniRef100_C8M7C3 RNA polymerase sigma factor rpoD n=1 Tax=Staphy...    73   2e-11
UniRef100_C8LTM9 Transcription initiation factor sigma plaC n=1 ...    73   2e-11
UniRef100_C8ACF1 RNA polymerase sigma factor rpoD n=1 Tax=Staphy...    73   2e-11
UniRef100_C7MYK8 RNA polymerase, sigma 70 subunit, RpoD n=1 Tax=...    73   2e-11
UniRef100_C1B3C8 RNA polymerase sigma factor n=2 Tax=Rhodococcus...    73   2e-11
UniRef100_C6J365 RNA polymerase sigma factor n=1 Tax=Paenibacill...    73   2e-11
UniRef100_C4F852 RNA polymerase sigma factor n=1 Tax=Collinsella...    73   2e-11
UniRef100_C4DE52 RNA polymerase sigma factor n=1 Tax=Stackebrand...    73   2e-11
UniRef100_C0ZYS7 RNA polymerase sigma factor n=2 Tax=Rhodococcus...    73   2e-11
UniRef100_B6FR93 RNA polymerase sigma factor n=1 Tax=Clostridium...    73   2e-11
UniRef100_B6BJK9 RNA polymerase sigma factor n=1 Tax=Campylobact...    73   2e-11
UniRef100_B8DTA7 RNA polymerase sigma factor n=4 Tax=Bifidobacte...    73   2e-11
UniRef100_P0A0J0 RNA polymerase sigma factor rpoD n=31 Tax=Staph...    73   2e-11
UniRef100_UPI0001984805 PREDICTED: hypothetical protein n=1 Tax=...    72   2e-11
UniRef100_UPI0001851148 RNA polymerase sigma factor RpoD n=1 Tax...    72   2e-11
UniRef100_Q6AK94 RNA polymerase sigma factor n=1 Tax=Desulfotale...    72   2e-11
UniRef100_Q65H81 RNA polymerase sigma factor n=1 Tax=Bacillus li...    72   2e-11
UniRef100_Q3Z904 RNA polymerase sigma factor n=1 Tax=Dehalococco...    72   2e-11
UniRef100_C4ZEX0 RNA polymerase sigma factor n=1 Tax=Eubacterium...    72   2e-11
UniRef100_C4LJ07 RNA polymerase sigma factor n=1 Tax=Corynebacte...    72   2e-11
UniRef100_B7KBG8 RNA polymerase sigma factor n=1 Tax=Cyanothece ...    72   2e-11
UniRef100_B2S154 RNA polymerase sigma factor n=1 Tax=Borrelia he...    72   2e-11
UniRef100_B1HTI2 RNA polymerase sigma factor n=1 Tax=Lysinibacil...    72   2e-11
UniRef100_A9KI23 RNA polymerase sigma factor n=1 Tax=Clostridium...    72   2e-11
UniRef100_A8MG96 RNA polymerase sigma factor n=1 Tax=Alkaliphilu...    72   2e-11
UniRef100_A8FFA5 RNA polymerase sigma factor n=1 Tax=Bacillus pu...    72   2e-11
UniRef100_A7Z6T5 RNA polymerase sigma factor n=1 Tax=Bacillus am...    72   2e-11
UniRef100_A5FRQ7 RNA polymerase sigma factor n=2 Tax=Dehalococco...    72   2e-11
UniRef100_A5CXQ9 RNA polymerase sigma factor n=1 Tax=Candidatus ...    72   2e-11
UniRef100_A4J7B9 RNA polymerase sigma factor n=1 Tax=Desulfotoma...    72   2e-11
UniRef100_Q84IZ6 RNA polymerase sigma factor (Fragment) n=1 Tax=...    72   2e-11
UniRef100_C5VCG4 RNA polymerase sigma factor n=1 Tax=Corynebacte...    72   2e-11
UniRef100_C0U2T9 RNA polymerase sigma factor n=1 Tax=Geodermatop...    72   2e-11
UniRef100_C0E2S2 RNA polymerase sigma factor n=1 Tax=Corynebacte...    72   2e-11
UniRef100_B5GQH3 RNA polymerase sigma factor n=1 Tax=Streptomyce...    72   2e-11
UniRef100_B0N3Z8 RNA polymerase sigma factor n=2 Tax=Bacteria Re...    72   2e-11
graphical overview:
alignment
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UniRef100_A1UF13 UniRef100_A8SMX7 UniRef100_A8SMX7 UniRef100_B5JG90 UniRef100_B5JG90 UniRef100_A8UQQ5 UniRef100_A8UQQ5 UniRef100_UPI00017F5605 UniRef100_UPI00017F5605 UniRef100_Q18BX5 UniRef100_Q18BX5 UniRef100_B2V7P9 UniRef100_B2V7P9 UniRef100_A5UPS4 UniRef100_A5UPS4 UniRef100_A4TCQ2 UniRef100_A4TCQ2 UniRef100_A1T7W4 UniRef100_A1T7W4 UniRef100_A0QVZ5 UniRef100_A0QVZ5 UniRef100_C9XSQ7 UniRef100_C9XSQ7 UniRef100_C4DZ35 UniRef100_C4DZ35 UniRef100_C1TLL9 UniRef100_C1TLL9 UniRef100_C0FDC5 UniRef100_C0FDC5 UniRef100_C0D895 UniRef100_C0D895 UniRef100_B4WFP5 UniRef100_B4WFP5 UniRef100_B0VJJ6 UniRef100_B0VJJ6 UniRef100_A6CE36 UniRef100_A6CE36 UniRef100_Q39515 UniRef100_Q39515 UniRef100_UPI0001742EF6 UniRef100_UPI0001742EF6 UniRef100_Q04A25 UniRef100_Q04A25 UniRef100_B0S1K1 UniRef100_B0S1K1 UniRef100_A7GXY2 UniRef100_A7GXY2 UniRef100_C7HUH1 UniRef100_C7HUH1 UniRef100_C2KW80 UniRef100_C2KW80 UniRef100_C2HGK9 UniRef100_C2HGK9 UniRef100_C0CZA7 UniRef100_C0CZA7 UniRef100_B6WAP8 UniRef100_B6WAP8 UniRef100_C5YWX9 UniRef100_C5YWX9 UniRef100_UPI0001B55E40 UniRef100_UPI0001B55E40 UniRef100_Q8RE13 UniRef100_Q8RE13 UniRef100_Q6A8Y2 UniRef100_Q6A8Y2 UniRef100_Q47MZ7 UniRef100_Q47MZ7 UniRef100_O67464 UniRef100_O67464 UniRef100_A7NS26 UniRef100_A7NS26 UniRef100_Q069K1 UniRef100_Q069K1 UniRef100_D0BQ42 UniRef100_D0BQ42 UniRef100_C8PRS2 UniRef100_C8PRS2 UniRef100_C7XNV3 UniRef100_C7XNV3 UniRef100_C7NIP6 UniRef100_C7NIP6 UniRef100_C7H329 UniRef100_C7H329 UniRef100_C4EHY7 UniRef100_C4EHY7 UniRef100_C3WX07 UniRef100_C3WX07 UniRef100_C3WPP3 UniRef100_C3WPP3 UniRef100_C2APA0 UniRef100_C2APA0 UniRef100_A6C4Z7 UniRef100_A6C4Z7 UniRef100_UPI0001B58A0C UniRef100_UPI0001B58A0C UniRef100_UPI0001B5683C UniRef100_UPI0001B5683C UniRef100_UPI0001B51DD8 UniRef100_UPI0001B51DD8 UniRef100_UPI0001B51157 UniRef100_UPI0001B51157 UniRef100_UPI0001B506AC UniRef100_UPI0001B506AC UniRef100_UPI0001AF41E8 UniRef100_UPI0001AF41E8 UniRef100_UPI0001AF2BE0 UniRef100_UPI0001AF2BE0 UniRef100_UPI0001AEF84E UniRef100_UPI0001AEF84E UniRef100_UPI00017F508B UniRef100_UPI00017F508B UniRef100_Q82KF9 UniRef100_Q82KF9 UniRef100_C5CCM1 UniRef100_C5CCM1 UniRef100_B8ZQV3 UniRef100_B8ZQV3 UniRef100_A9B077 UniRef100_A9B077 UniRef100_Q9R5W0 UniRef100_Q9R5W0 UniRef100_Q59913 UniRef100_Q59913 UniRef100_Q59813 UniRef100_Q59813 UniRef100_C9Z0K3 UniRef100_C9Z0K3 UniRef100_C9NBA0 UniRef100_C9NBA0 UniRef100_C8PE38 UniRef100_C8PE38 UniRef100_C8PAI1 UniRef100_C8PAI1 UniRef100_C7GZY7 UniRef100_C7GZY7 UniRef100_C6JI10 UniRef100_C6JI10 UniRef100_C4CIZ0 UniRef100_C4CIZ0 UniRef100_C2BII3 UniRef100_C2BII3 UniRef100_B5GW69 UniRef100_B5GW69 UniRef100_B5G756 UniRef100_B5G756 UniRef100_B4VFQ3 UniRef100_B4VFQ3 UniRef100_P77951 UniRef100_P77951 UniRef100_P18183 UniRef100_P18183 UniRef100_Q892T0 UniRef100_Q892T0 UniRef100_C0QRZ3 UniRef100_C0QRZ3 UniRef100_A7NG03 UniRef100_A7NG03 UniRef100_A6W880 UniRef100_A6W880 UniRef100_A5UQ16 UniRef100_A5UQ16 UniRef100_A0Q1P4 UniRef100_A0Q1P4 UniRef100_P77906 UniRef100_P77906 UniRef100_C9KB66 UniRef100_C9KB66 UniRef100_C7R4M2 UniRef100_C7R4M2 UniRef100_C7QCX2 UniRef100_C7QCX2 UniRef100_C7MCF9 UniRef100_C7MCF9 UniRef100_C5VRR6 UniRef100_C5VRR6 UniRef100_C4FZZ1 UniRef100_C4FZZ1 UniRef100_C2ADB9 UniRef100_C2ADB9 UniRef100_C1ZAZ0 UniRef100_C1ZAZ0 UniRef100_C1WS55 UniRef100_C1WS55 UniRef100_C0V8H1 UniRef100_C0V8H1 UniRef100_C0GBZ7 UniRef100_C0GBZ7 UniRef100_B1BDC8 UniRef100_B1BDC8 UniRef100_A7BDF7 UniRef100_A7BDF7 UniRef100_A5WQW2 UniRef100_A5WQW2 UniRef100_A0ZIW0 UniRef100_A0ZIW0 UniRef100_Q9ZPL1 UniRef100_Q9ZPL1 UniRef100_Q3AEW8 UniRef100_Q3AEW8 UniRef100_A7ZE90 UniRef100_A7ZE90 UniRef100_A7HK63 UniRef100_A7HK63 UniRef100_Q59553 UniRef100_Q59553 UniRef100_B1XNJ6 UniRef100_B1XNJ6 UniRef100_C9KGU4 UniRef100_C9KGU4