BB906234 ( RCE04418 )

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BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BB906234  RCE04418
         (578 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Bee...   329   8e-89
UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringsp...   329   8e-89
UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepI...   328   2e-88
UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato blac...   328   2e-88
UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Gra...   291   2e-77
UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine c...   291   2e-77
UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cyc...   194   5e-48
UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necro...   194   5e-48
UniRef100_Q88893 RNA-directed RNA polymerase n=1 Tax=Tobacco rin...   117   8e-25
UniRef100_UPI00003FE53F RNA-dependent RNA polymerase n=1 Tax=Tom...   116   1e-24
UniRef100_Q9QRA7 Polyprotein (Fragment) n=1 Tax=Tomato ringspot ...   116   1e-24
UniRef100_P29150 RNA-directed RNA polymerase n=1 Tax=Tomato ring...   116   1e-24
UniRef100_Q9QRA8 Polyprotein (Fragment) n=1 Tax=Tomato ringspot ...   116   1e-24
UniRef100_Q155U1 RNA-dependent RNA polymerase (Fragment) n=1 Tax...   116   1e-24
UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white rin...   115   2e-24
UniRef100_Q9QRA9 Polyprotein (Fragment) n=1 Tax=Tomato ringspot ...   115   2e-24
UniRef100_Q9QRA6 Polyprotein (Fragment) n=1 Tax=Tomato ringspot ...   115   3e-24
UniRef100_P29149 RNA-directed RNA polymerase n=1 Tax=Grapevine f...   111   4e-23
UniRef100_B4YNP7 Polyprotein 1 n=1 Tax=Arabis mosaic virus RepID...   105   3e-21
UniRef100_UPI00003FE537 RNA-dependent RNA polymerase n=1 Tax=Ara...   103   1e-20
UniRef100_Q6W8W5 RNA-directed RNA polymerase n=1 Tax=Arabis mosa...   103   1e-20
UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Bla...    99   2e-19
UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurran...    99   2e-19
UniRef100_O37086 RNA1 polyprotein n=1 Tax=Peach rosette mosaic v...    72   3e-11
UniRef100_Q02941 RNA-directed RNA polymerase (Fragment) n=1 Tax=...    61   5e-08
UniRef100_Q3L2Z2 Polyprotein 1 n=1 Tax=Bean pod mottle virus Rep...    60   2e-07
UniRef100_Q24M90 Polyprotein 1 n=1 Tax=Raspberry ringspot virus ...    59   3e-07
UniRef100_Q8JUF2 Polyprotein 1 n=1 Tax=Bean pod mottle virus Rep...    59   4e-07
UniRef100_UPI0000163CF4 putative RNA dependent RNA polymerase n=...    58   5e-07
UniRef100_Q9YJU5 RNA-directed RNA polymerase n=1 Tax=Bean-pod mo...    58   5e-07
UniRef100_Q8JUF5 Polyprotein 1 n=1 Tax=Bean pod mottle virus Rep...    58   6e-07
UniRef100_Q3L2Z1 Polyprotein 1 n=1 Tax=Bean pod mottle virus Rep...    58   6e-07
UniRef100_B1A4F8 Polyprotein 1 n=1 Tax=Squash mosaic virus RepID...    57   1e-06
UniRef100_Q6W8W4 RNA-directed RNA polymerase n=1 Tax=Raspberry r...    57   1e-06
UniRef100_UPI0000163D09 RNA-dependent RNA polymerase n=1 Tax=Squ...    54   7e-06
UniRef100_Q91PR6 Polyprotein n=1 Tax=Squash mosaic virus RepID=Q...    54   7e-06
graphical overview:
alignment
UniRef100_UPI0000163E03 UniRef100_UPI0000163E03 UniRef100_P18522 UniRef100_P18522 UniRef100_UPI000034ED08 UniRef100_UPI000034ED08 UniRef100_Q8B8X3 UniRef100_Q8B8X3 UniRef100_UPI00017F0C90 UniRef100_UPI00017F0C90 UniRef100_P13025 UniRef100_P13025 UniRef100_UPI00003FE52F UniRef100_UPI00003FE52F UniRef100_Q8QVV0 UniRef100_Q8QVV0 UniRef100_Q88893 UniRef100_Q88893 UniRef100_UPI00003FE53F UniRef100_UPI00003FE53F UniRef100_Q9QRA7 UniRef100_Q9QRA7 UniRef100_P29150 UniRef100_P29150 UniRef100_Q9QRA8 UniRef100_Q9QRA8 UniRef100_Q155U1 UniRef100_Q155U1 UniRef100_A2ID54 UniRef100_A2ID54 UniRef100_Q9QRA9 UniRef100_Q9QRA9 UniRef100_Q9QRA6 UniRef100_Q9QRA6 UniRef100_P29149 UniRef100_P29149 UniRef100_B4YNP7 UniRef100_B4YNP7 UniRef100_UPI00003FE537 UniRef100_UPI00003FE537 UniRef100_Q6W8W5 UniRef100_Q6W8W5 UniRef100_UPI0000163DCE UniRef100_UPI0000163DCE UniRef100_Q8V5E0 UniRef100_Q8V5E0 UniRef100_O37086 UniRef100_O37086 UniRef100_Q02941 UniRef100_Q02941 UniRef100_Q3L2Z2 UniRef100_Q3L2Z2 UniRef100_Q24M90 UniRef100_Q24M90 UniRef100_Q8JUF2 UniRef100_Q8JUF2 UniRef100_UPI0000163CF4 UniRef100_UPI0000163CF4 UniRef100_Q9YJU5 UniRef100_Q9YJU5 UniRef100_Q8JUF5 UniRef100_Q8JUF5 UniRef100_Q3L2Z1 UniRef100_Q3L2Z1 UniRef100_B1A4F8 UniRef100_B1A4F8 UniRef100_Q6W8W4 UniRef100_Q6W8W4 UniRef100_UPI0000163D09 UniRef100_UPI0000163D09