[UP]
BLASTX 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BB904582 RCE02538
(562 letters)
Database: uniref100
9,526,577 sequences; 3,332,566,763 total letters
Searching..................................................done
significant alignments:[graphical|details]
UniRef100_Q2MGQ5 RNA polymerase, dimerisation n=1 Tax=Medicago t... 278 2e-73
UniRef100_B9RYB6 DNA-directed RNA polymerase II subunit, putativ... 263 7e-69
UniRef100_A7P9N6 Chromosome chr3 scaffold_8, whole genome shotgu... 255 2e-66
UniRef100_A5B429 Putative uncharacterized protein n=1 Tax=Vitis ... 255 2e-66
UniRef100_B9HS44 Predicted protein n=1 Tax=Populus trichocarpa R... 253 5e-66
UniRef100_A9SHD1 Predicted protein n=1 Tax=Physcomitrella patens... 251 2e-65
UniRef100_Q8LAJ1 DNA-directed RNA polymerase II, third largest s... 242 1e-62
UniRef100_Q39211 DNA-directed RNA polymerase II subunit RPB3-A n... 242 1e-62
UniRef100_Q39212 DNA-directed RNA polymerase II subunit RPB3-B n... 231 2e-59
UniRef100_Q6YX88 Os09g0110400 protein n=2 Tax=Oryza sativa RepID... 214 4e-54
UniRef100_C5X7D7 Putative uncharacterized protein Sb02g014460 n=... 193 7e-48
UniRef100_B6TCC3 DNA-directed RNA polymerase II 36 kDa polypepti... 190 7e-47
UniRef100_C1MVZ5 Predicted protein n=1 Tax=Micromonas pusilla CC... 140 9e-32
UniRef100_C1EBY2 Dna-directed RNA polymerase II polypeptide a n=... 139 2e-31
UniRef100_B9GHC8 Predicted protein (Fragment) n=1 Tax=Populus tr... 126 1e-27
UniRef100_A9SM40 Predicted protein n=1 Tax=Physcomitrella patens... 125 2e-27
UniRef100_Q54DH7 DNA-directed RNA polymerase II subunit rpb3 n=1... 115 2e-24
UniRef100_Q01F02 Rpb3 DNA-directed RNA polymerase II subunit 3 (... 113 1e-23
UniRef100_A4RSP9 DNA-directed RNA polymerase II subunit 3 n=1 Ta... 106 1e-21
UniRef100_B7G229 Predicted protein n=1 Tax=Phaeodactylum tricorn... 96 2e-18
UniRef100_A8ICX5 DNA-directed RNA polymerase II, 36 kDa polypept... 94 9e-18
UniRef100_P16925 Conjugation stage-specific protein n=2 Tax=Tetr... 93 2e-17
UniRef100_A0DID7 Chromosome undetermined scaffold_51, whole geno... 92 2e-17
UniRef100_A0CLS1 Chromosome undetermined scaffold_204, whole gen... 92 2e-17
UniRef100_Q4DWU1 DNA-directed RNA polymerase II subunit 3, putat... 90 1e-16
UniRef100_A8MR04 Uncharacterized protein At2g15400.2 n=1 Tax=Ara... 86 3e-15
UniRef100_B8BWN8 RP3A,-like protein to dna-directed RNA polymera... 84 7e-15
UniRef100_B6AI35 DNA-directed RNA polymerase II subunit RPB3, pu... 84 7e-15
UniRef100_C5LCN7 Conjugation stage-specific protein, putative n=... 82 3e-14
UniRef100_B0EHR6 DNA-directed RNA polymerase subunit D, putative... 77 1e-12
UniRef100_Q8IHT3 DNA-directed RNA polymerase I, putative n=1 Tax... 76 2e-12
UniRef100_C4M554 DNA-directed RNA polymerase II subunit, putativ... 75 3e-12
UniRef100_B9PNQ8 DNA-directed RNA polymerase II, putative n=1 Ta... 75 3e-12
UniRef100_B6AC64 DNA-directed RNA polymerases I and III subunit ... 75 3e-12
UniRef100_B6KGB1 DNA-directed RNA polymerase II, putative n=2 Ta... 74 1e-11
UniRef100_C9ZKR1 DNA-directed RNA polymerase II subunit 3, putat... 72 4e-11
UniRef100_A7AWB4 DNA-directed RNA polymerase II, putative n=1 Ta... 71 5e-11
UniRef100_A9T5P0 Predicted protein n=1 Tax=Physcomitrella patens... 70 1e-10
UniRef100_Q5CNH1 Conjugation stage-specific protein n=1 Tax=Cryp... 69 2e-10
UniRef100_Q4N9T5 DNA-directed RNA polymerase II, putative n=1 Ta... 69 2e-10
UniRef100_Q5CSH3 RNA polymerase II B3 subunit n=1 Tax=Cryptospor... 68 4e-10
UniRef100_B9GFY9 Predicted protein n=1 Tax=Populus trichocarpa R... 67 7e-10
UniRef100_B6KLD3 DNA-directed RNA polymerases I and III subunit ... 67 7e-10
UniRef100_Q4FY45 DNA-directed RNA polymerase I-like protein n=1 ... 67 9e-10
UniRef100_A4I451 DNA-directed RNA polymerase I-like protein n=1 ... 67 9e-10
UniRef100_C5XXF5 Putative uncharacterized protein Sb04g006420 n=... 67 1e-09
UniRef100_B9S9W7 DNA-directed RNA polymerase I/III subunits, put... 67 1e-09
UniRef100_C5M6J2 DNA-directed RNA polymerases I and III 40 kDa p... 66 2e-09
UniRef100_Q54SN4 DNA-directed RNA polymerases I and III subunit ... 65 5e-09
UniRef100_Q10MU2 Os03g0295400 protein n=1 Tax=Oryza sativa Japon... 64 6e-09
UniRef100_Q6FXP6 Strain CBS138 chromosome B complete sequence n=... 64 6e-09
UniRef100_C4XY85 Putative uncharacterized protein n=1 Tax=Clavis... 64 6e-09
UniRef100_Q4UFZ3 DNA-directed RNA polymerase ii, putative n=1 Ta... 63 1e-08
UniRef100_Q6BV37 DEHA2C05654p n=1 Tax=Debaryomyces hansenii RepI... 63 1e-08
UniRef100_A7AQ72 DNA-directed RNA polymerase, alpha subunit, N t... 63 2e-08
UniRef100_UPI00019857F6 PREDICTED: hypothetical protein n=1 Tax=... 62 2e-08
UniRef100_A7Q9B1 Chromosome chr19 scaffold_66, whole genome shot... 62 2e-08
UniRef100_A5K591 DNA-directed RNA polymerase I, putative n=1 Tax... 62 3e-08
UniRef100_Q4YX04 DNA-directed RNA polymerase I, putative n=1 Tax... 62 4e-08
UniRef100_A4HH22 DNA-directed RNA polymerase I-like protein n=1 ... 61 7e-08
UniRef100_C5DTY7 ZYRO0C12364p n=1 Tax=Zygosaccharomyces rouxii C... 60 9e-08
UniRef100_B3L5N8 DNA-diDNA-directed RNA polymerase I, putative n... 60 1e-07
UniRef100_Q59ZF5 Putative uncharacterized protein RPC40 n=1 Tax=... 60 1e-07
UniRef100_C4YIK8 DNA-directed RNA polymerases I and III 40 kDa p... 60 1e-07
UniRef100_A2F4R6 RNA polymerase Rpb3/Rpb11 dimerisation domain c... 60 1e-07
UniRef100_A1RWW0 DNA-directed RNA polymerase, subunit D n=1 Tax=... 60 1e-07
UniRef100_Q7RN53 DNA-directed RNA polymerases i and iii 40 kDa p... 59 2e-07
UniRef100_Q6CQS0 KLLA0D14861p n=1 Tax=Kluyveromyces lactis RepID... 59 2e-07
UniRef100_C6TAS0 Putative uncharacterized protein n=1 Tax=Glycin... 59 3e-07
UniRef100_A9V9D0 Predicted protein n=1 Tax=Monosiga brevicollis ... 59 3e-07
UniRef100_B9WBJ1 DNA-directed RNA polymerases I and III subunit,... 59 3e-07
UniRef100_A8PVP1 Putative uncharacterized protein n=1 Tax=Malass... 59 3e-07
UniRef100_Q235X0 DNA-directed RNA polymerase I 40 kDa polypeptid... 59 3e-07
UniRef100_C5L9Q7 DNA-directed RNA polymerase I, putative n=1 Tax... 59 3e-07
UniRef100_A0D420 Chromosome undetermined scaffold_37, whole geno... 59 3e-07
UniRef100_B0CTH8 Predicted protein n=1 Tax=Laccaria bicolor S238... 59 3e-07
UniRef100_UPI0000E468FB PREDICTED: hypothetical protein n=1 Tax=... 58 4e-07
UniRef100_Q9C6C2 RNA polymerase subunit; 10595-12672 n=1 Tax=Ara... 58 4e-07
UniRef100_Q8LD68 RNA polymerase subunit n=1 Tax=Arabidopsis thal... 58 4e-07
UniRef100_Q39216 RNA polymerase subunit n=1 Tax=Arabidopsis thal... 58 4e-07
UniRef100_Q39215 RNA polymerase subunit n=1 Tax=Arabidopsis thal... 58 4e-07
UniRef100_Q4X0E8 DNA-directed RNA polymerase I and III subunit R... 58 4e-07
UniRef100_B0XTN4 DNA-directed RNA polymerase I and III subunit R... 58 4e-07
UniRef100_A0D2I2 Chromosome undetermined scaffold_35, whole geno... 58 6e-07
UniRef100_A1DHS7 DNA-directed RNA polymerase I and III subunit R... 58 6e-07
UniRef100_UPI000151BDE7 conserved hypothetical protein n=1 Tax=P... 57 1e-06
UniRef100_C5LDA1 DNA-directed RNA polymerases I and III 40 kDa p... 57 1e-06
UniRef100_B4FAR4 Putative uncharacterized protein n=1 Tax=Zea ma... 57 1e-06
UniRef100_A5DTC9 DNA-directed RNA polymerases I and III 40 kDa p... 57 1e-06
UniRef100_A5DPW5 Putative uncharacterized protein n=1 Tax=Pichia... 57 1e-06
UniRef100_UPI00019261EE PREDICTED: similar to DNA-directed RNA p... 56 2e-06
UniRef100_B6JXY4 DNA-directed RNA polymerases I and III subunit ... 56 2e-06
UniRef100_O94616 DNA-directed RNA polymerases I and III subunit ... 56 2e-06
UniRef100_Q5CPY6 RNA polymerase III C5 subunit n=1 Tax=Cryptospo... 55 3e-06
UniRef100_Q5CJZ9 DNA-directed RNA polymerase I n=1 Tax=Cryptospo... 55 3e-06
UniRef100_B6GYD0 Pc12g12250 protein n=1 Tax=Penicillium chrysoge... 55 3e-06
UniRef100_A8N510 Putative uncharacterized protein n=1 Tax=Coprin... 55 3e-06
UniRef100_A3GGP5 RNA polymerase III (C) subunit n=1 Tax=Pichia s... 55 3e-06
UniRef100_B6Q738 DNA-directed RNA polymerase I and III subunit R... 55 4e-06
UniRef100_B3LK74 DNA-directed RNA polymerases I and III 40 kDa p... 55 4e-06
UniRef100_A1C7I5 DNA-directed RNA polymerase I and III subunit R... 55 4e-06
UniRef100_O08521 Homologous to 40kD subunit of RNA-polymerase I ... 55 5e-06
UniRef100_A2QD13 Complex: RCP40 of S. cerevisiae associates with... 55 5e-06
UniRef100_P07703 DNA-directed RNA polymerases I and III subunit ... 55 5e-06
UniRef100_A7TPZ5 Putative uncharacterized protein n=1 Tax=Vander... 54 6e-06
UniRef100_A8PAX3 DNA-directed RNA polymerase II 33 kDa polypepti... 54 8e-06
UniRef100_C6HA00 DNA-directed RNA polymerase I and III n=1 Tax=A... 54 8e-06