hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /data/Pfam.bin
Sequence file:            /tmp/20090425/iprscan-20090425-18305118/chunk_1/iprscan-20090425-18305118.nocrc
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Query sequence: pF1KE0568
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
PF01500.7.fs Keratin, high sulfur B2 protein               39.7      3e-11   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
PF01500.7.fs   1/1     217   285 ..     1    85 [.    39.7    3e-11

Alignments of top-scoring domains:
PF01500.7.fs: domain 1 of 1, from 217 to 285: score 39.7, E = 3e-11
                   *->qtScCGFptCStlgTCGsscCqpsCcqtsCCqPsCcqssCCQPvccq
                      q ScC  p CS++g CGsscCq     +sCC+P CcqssCC+P cc 
   pF1KE0568   217    QSSCCK-PCCSSSG-CGSSCCQ-----SSCCKPYCCQSSCCKP-CCS 255  

                   ttccrtcfqsccvpvtcqssCCqPtCcqtSCCqPtCcQ<-*
                   ++ c+        +++cqssCC P+C q+SCC P+CcQ   
   pF1KE0568   256 SSGCG--------SSCCQSSCCNPCCSQSSCCVPVCCQ    285  

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