hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /data/Pfam.bin
Sequence file:            /tmp/20090425/iprscan-20090425-18142696/chunk_1/iprscan-20090425-18142696.nocrc
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Query sequence: pF1KE0565
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
PF01500.7.fs Keratin, high sulfur B2 protein               26.1    2.4e-07   2

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
PF01500.7.fs   2/2     175   235 ..    10    85 ..    18.9  2.7e-05

Alignments of top-scoring domains:
PF01500.7.fs: domain 2 of 2, from 175 to 235: score 18.9, E = 2.7e-05
                   *->CStlgTCGsscCqpsCcqtsCCqPsCcqssCCQPvccqttccrtcfq
                      C+++g CGsscCq+sCc+ +CC    +qssCC+P cc ++ c+    
   pF1KE0565   175    CCSSG-CGSSCCQSSCCK-PCC----SQSSCCKP-CCCSSGCG---- 210  

                   sccvpvtcqssCCqPtCcqtSCCqPtCcQ<-*
                       +++cqssCC+P++ q+SCC P CcQ   
   pF1KE0565   211 ----SSCCQSSCCKPCSSQSSCCVPICCQ    235  

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