hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /data/Pfam.bin
Sequence file:            /tmp/20090426/iprscan-20090426-12085422/chunk_1/iprscan-20090426-12085422.nocrc
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Query sequence: pF1KE0230
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
PF01500.7.fs Keratin, high sulfur B2 protein               14.2     0.0006   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
PF01500.7.fs   1/1      98   174 ..     1    85 [.    14.2   0.0006

Alignments of top-scoring domains:
PF01500.7.fs: domain 1 of 1, from 98 to 174: score 14.2, E = 0.0006
                   *->qtScCGFptCStlgTCGs.scCqpsCcqtsCCqPsCcqssCCQPvcc
                       +Sc G    S++g CGs +c q+sCc+ +CC  s c+ssCCQ +cc
   pF1KE0230    98    CGSCGG----SKGG-CGScGCSQSSCCK-PCCCSSGCGSSCCQSSCC 138  

                   qttccrtcfqsccvpvtcqssCCqPtCcqtSCCqPtCcQ<-*
                      cc+   +sccvpv+cqssCC+P+Ccq+ CC P+CcQ   
   pF1KE0230   139 KPCCCQ---SSCCVPVCCQSSCCKPCCCQSNCCVPVCCQ    174  

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