HSPA13 ORF clone pFN21ASDB0037

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21ASDB0037

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Clone info.

Species

human

Clone Name

pFN21ASDB0037 Sequence (with vector) Restriction Map

Product ID

FHC00993

Flexi Clone PID

FXC00993

Original Clone PID

ORK00993

ORF Sequence

DNA sequence (1413 bp)
Protein sequence (471 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384374]

Gene

KIBB0037

Symbol

HSPA13

Alias : STCH

Description

heat shock protein 70kDa family, member 13

Original Clone ID

fj14744

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1413 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 471 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13567.1 6.9e-193 100.0 HSPA13 CCDS34413.1 5.5e-43 39.3 HSPA1L CCDS1231.1 3e-42 39.0 HSPA6 CCDS34415.1 4e-42 39.5 HSPA1B CCDS34414.1 4e-42 39.5 HSPA1A The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001023 32 45 PR00301 Heat shock protein Hsp70 IPR001023 62 74 PR00301 Heat shock protein Hsp70 IPR001023 399 415 PR00301 Heat shock protein Hsp70 IPR001023 430 450 PR00301 Heat shock protein Hsp70 HMMPfam IPR013126 33 317 PF00012 Heat shock protein 70 IPR013126 358 450 PF00012 Heat shock protein 70
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MAREMTILGSAVLTLLLAGYLAQ 23 PRIMARY 23 2 29 PTPKVIGIDLGTTYCSVGVFFPG 51 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_008879 471 601100 100.0 100.0 NP_005518 641 140559 39.3 90.2 NP_002146 643 140555 39.0 89.4 NP_005337 641 603012 39.5 90.2 NP_005336 641 140550 39.5 90.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21ASDB0037 Download

>KIBB0037  1413 bp
ATGGCCAGAGAGATGACGATCTTAGGATCGGCTGTTTTGACTCTCCTGTTGGCCGGCTAT
TTGGCACAACAGTATTTACCATTGCCTACTCCTAAAGTGATTGGTATTGATCTTGGCACC
ACCTATTGTTCTGTTGGGGTGTTTTTTCCTGGCACAGGAAAAGTAAAGGTGATTCCAGAT
GAAAATGGGCATATCAGCATACCCAGCATGGTGTCTTTTACTGACAATGATGTATATGTG
GGATATGAAAGCGTAGAGCTGGCAGATTCAAATCCTCAAAACACAATATATGATGCCAAA
AGATTCATAGGCAAGATTTTTACCGCAGAAGAGTTGGAGGCTGAAATTGGCAGATACCCA
TTTAAGGTTTTAAACAAAAATGGAATGGTTGAGTTTTCTGTGACAAGTAATGAGACCATC
ACAGTGTCCCCAGAATATGTTGGCTCTCGACTATTGTTGAAGTTAAAGGAAATGGCAGAG
GCATATCTTGGAATGCCAGTTGCCAATGCTGTCATTTCTGTACCAGCAGAATTTGATCTA
AAACAGAGAAATTCAACAATTGAAGCTGCTAACCTTGCAGGACTGAAGATTTTGAGGGTA
ATAAATGAACCCACAGCAGCAGCTATGGCCTATGGTCTCCACAAGGCTGACGTCTTCCAC
GTCTTGGTGATAGACTTGGGCGGAGGAACTCTAGATGTGTCTTTACTGAATAAACAAGGA
GGGATGTTTCTAACCCGAGCAATGTCTGGAAACAATAAACTTGGAGGACAGGACTTCAAT
CAGAGATTGCTTCAGTACTTATATAAACAGATCTATCAAACATATGGCTTCGTGCCCTCT
AGGAAAGAGGAAATCCACAGATTGAGACAAGCTGTGGAAATGGTCAAATTAAATCTGACT
CTTCATCAATCTGCTCAGTTGTCAGTATTACTAACGGTGGAGGAGCAGGACAGGAAGGAA
CCTCACAGTAGTGACACTGAACTGCCAAAAGACAAACTTTCCTCAGCAGATGACCATCGC
GTGAACAGTGGGTTTGGACGTGGCCTTTCTGATAAGAAAAGTGGAGAAAGTCAGGTTTTA
TTTGAAACAGAAATATCACGGAAACTCTTTGATACCCTTAATGAAGACCTCTTTCAGAAA
ATACTGGTACCCATTCAGCAAGTATTGAAAGAAGGCCACCTGGAAAAGACTGAGATTGAT
GAGGTGGTTTTAGTTGGGGGCTCCACTCGTATTCCTCGGATCCGTCAAGTCATTCAAGAG
TTCTTTGGAAAAGATCCCAACACATCTGTAGACCCTGACCTAGCAGTAGTAACGGGAGTG
GCTATCCAAGCAGGGATTGATGGAGGCTCTTGGCCTCTCCAAGTCAGTGCTTTAGAAATT
CCCAATAAGCATTTACAAAAAACCAACTTCAAC

ORF Protein

Cloned ORF protein sequence for pFN21ASDB0037 Download

>KIBB0037  471 aa
MAREMTILGSAVLTLLLAGYLAQQYLPLPTPKVIGIDLGTTYCSVGVFFPGTGKVKVIPD
ENGHISIPSMVSFTDNDVYVGYESVELADSNPQNTIYDAKRFIGKIFTAEELEAEIGRYP
FKVLNKNGMVEFSVTSNETITVSPEYVGSRLLLKLKEMAEAYLGMPVANAVISVPAEFDL
KQRNSTIEAANLAGLKILRVINEPTAAAMAYGLHKADVFHVLVIDLGGGTLDVSLLNKQG
GMFLTRAMSGNNKLGGQDFNQRLLQYLYKQIYQTYGFVPSRKEEIHRLRQAVEMVKLNLT
LHQSAQLSVLLTVEEQDRKEPHSSDTELPKDKLSSADDHRVNSGFGRGLSDKKSGESQVL
FETEISRKLFDTLNEDLFQKILVPIQQVLKEGHLEKTEIDEVVLVGGSTRIPRIRQVIQE
FFGKDPNTSVDPDLAVVTGVAIQAGIDGGSWPLQVSALEIPNKHLQKTNFN

ORF+Vector

Nucleotide Sequence (with vector) for pFN21ASDB0037 Download

>pFN21ASDB0037  6142 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCTTTCGAAGGAGATAGAACCATGGCCAGAGAGATGAC
GATCTTAGGATCGGCTGTTTTGACTCTCCTGTTGGCCGGCTATTTGGCACAACAGTATTT
ACCATTGCCTACTCCTAAAGTGATTGGTATTGATCTTGGCACCACCTATTGTTCTGTTGG
GGTGTTTTTTCCTGGCACAGGAAAAGTAAAGGTGATTCCAGATGAAAATGGGCATATCAG
CATACCCAGCATGGTGTCTTTTACTGACAATGATGTATATGTGGGATATGAAAGCGTAGA
GCTGGCAGATTCAAATCCTCAAAACACAATATATGATGCCAAAAGATTCATAGGCAAGAT
TTTTACCGCAGAAGAGTTGGAGGCTGAAATTGGCAGATACCCATTTAAGGTTTTAAACAA
AAATGGAATGGTTGAGTTTTCTGTGACAAGTAATGAGACCATCACAGTGTCCCCAGAATA
TGTTGGCTCTCGACTATTGTTGAAGTTAAAGGAAATGGCAGAGGCATATCTTGGAATGCC
AGTTGCCAATGCTGTCATTTCTGTACCAGCAGAATTTGATCTAAAACAGAGAAATTCAAC
AATTGAAGCTGCTAACCTTGCAGGACTGAAGATTTTGAGGGTAATAAATGAACCCACAGC
AGCAGCTATGGCCTATGGTCTCCACAAGGCTGACGTCTTCCACGTCTTGGTGATAGACTT
GGGCGGAGGAACTCTAGATGTGTCTTTACTGAATAAACAAGGAGGGATGTTTCTAACCCG
AGCAATGTCTGGAAACAATAAACTTGGAGGACAGGACTTCAATCAGAGATTGCTTCAGTA
CTTATATAAACAGATCTATCAAACATATGGCTTCGTGCCCTCTAGGAAAGAGGAAATCCA
CAGATTGAGACAAGCTGTGGAAATGGTCAAATTAAATCTGACTCTTCATCAATCTGCTCA
GTTGTCAGTATTACTAACGGTGGAGGAGCAGGACAGGAAGGAACCTCACAGTAGTGACAC
TGAACTGCCAAAAGACAAACTTTCCTCAGCAGATGACCATCGCGTGAACAGTGGGTTTGG
ACGTGGCCTTTCTGATAAGAAAAGTGGAGAAAGTCAGGTTTTATTTGAAACAGAAATATC
ACGGAAACTCTTTGATACCCTTAATGAAGACCTCTTTCAGAAAATACTGGTACCCATTCA
GCAAGTATTGAAAGAAGGCCACCTGGAAAAGACTGAGATTGATGAGGTGGTTTTAGTTGG
GGGCTCCACTCGTATTCCTCGGATCCGTCAAGTCATTCAAGAGTTCTTTGGAAAAGATCC
CAACACATCTGTAGACCCTGACCTAGCAGTAGTAACGGGAGTGGCTATCCAAGCAGGGAT
TGATGGAGGCTCTTGGCCTCTCCAAGTCAGTGCTTTAGAAATTCCCAATAAGCATTTACA
AAAAACCAACTTCAACTACGTAGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCT
AGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTG
AGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGA
GCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAA
AAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGC
AATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATG
TGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGG
ATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGG
GGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGC
ACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAAT
ATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAG
AGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTT
CCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGT
GCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGC
CCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTA
TCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGAC
TTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAA
TTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACT
ATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGC
CTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACG
ATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTA
GCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTG
CGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGG
TCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATC
TACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGT
GCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTAT
CAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGA
ACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGT
TTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGT
GGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGC
GCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAA
GCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCT
CCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTA
ACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTG
GTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGC
CTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTA
CCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTG
GTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTT
TGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGG
TCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAA
CGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGG
ATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAA
TTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGC
TGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATC
CACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGT
CCGGCGTAGAGGATCGAGATCT