SSX2IP ORF clone pFN21ASDA0923

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21ASDA0923

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Clone info.

Species

human

Clone Name

pFN21ASDA0923 Sequence (with vector) Restriction Map

Product ID

FHC00684

Flexi Clone PID

FXC00684

ORF Sequence

DNA sequence (1842 bp)
Protein sequence (614 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384045]

Gene

KIAA0923

Symbol

SSX2IP

Alias : ADIP, hMsd1

Description

synovial sarcoma, X breakpoint 2 interacting protein, transcript variant 5

Original Clone ID

hh02882

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1842 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 614 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS699.1 2.5e-143 100.0 SSX2IP CCDS53337.1 7e-137 100.0 SSX2IP The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR021622 63 214 PF11559 Afadin/alpha-actinin-binding
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_054740 614 608690 100.0 100.0 NP_001159765 614 608690 100.0 100.0 XP_011538912 614 608690 100.0 100.0 NP_001159889 614 608690 100.0 100.0 XP_005270485 614 608690 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21ASDA0923 Download

>KIAA0923  1842 bp
ATGGGAGATTGGATGACTGTTACAGATCCAGGTCTGTCTTCAGAAAGCAAAACTATCTCT
CAATATACCTCAGAAACAAAGATGTCTCCATCAAGTTTATACTCACAGCAAGTGCTATGT
TCTTCAATACCTTTATCGAAAAATGTGCACAGTTTTTTCAGTGCCTTCTGCACAGAAGAT
AATATTGAACAGAGTATCTCATATCTTGATCAGGAATTGACTACTTTTGGTTTTCCTTCA
TTATATGAAGAATCCAAAGGTAAAGAGACAAAGAGAGAGTTAAATATAGTAGCTGTACTA
AATTGTATGAATGAGCTGCTTGTGCTTCAGCGGAAGAACCTTCTAGCTCAGGAAAATGTG
GAGACACAGAATTTGAAGCTGGGAAGTGATATGGACCATCTACAGAGCTGCTACTCAAAA
CTTAAGGAACAACTGGAAACCTCCAGGAGGGAAATGATTGGGCTTCAGGAAAGAGACAGA
CAGTTACAATGTAAGAACAGGAATTTGCATCAGCTACTAAAGAATGAGAAAGATGAGGTG
CAAAAATTACAAAATATCATTGCAAGTCGAGCTACTCAGTATAATCATGATATGAAGAGA
AAAGAGCGTGAATATAATAAACTGAAGGAACGTCTACATCAACTTGTTATGAACAAGAAA
GATAAGAAAATAGCTATGGACATTTTGAATTATGTCGGGAGAGCTGATGGAAAAAGAGGC
TCCTGGAGGACTGGTAAAACTGAAGCCAGGAATGAAGATGAAATGTATAAAATTCTCTTG
AATGATTATGAATATCGTCAGAAACAAATCCTAATGGAAAATGCAGAACTTAAGAAGGTT
CTTCAACAAATGAAAAAGGAAATGATTTCTCTTCTTTCTCCCCAAAAGAAGAAACCTAGA
GAAAGAGTAGATGATAGTACAGGAACTGTTATTTCCGATGTTGAAGAAGATGCCGGGGAA
CTAAGCAGAGAGAGTATGTGGGACCTTTCCTGTGAAACTGTGAGAGAGCAGCTTACAAAC
AGCATCAGAAAACAGTGGAGAATTTTGAAAAGTCATGTAGAAAAGCTTGATAACCAAGTT
TCAAAGGTACACCTGGAAGGTTTTAATGATGAAGATGTAATCTCACGACAAGACCATGAA
CAAGAAACTGAAAAACTCGAGTTAGAAATTCAGCAGTGTAAAGAAATGATTAAAACTCAG
CAACAGCTTTTACAGCAGCAGCTCGCTACTGCATATGATGATGATACCACTTCACTATTA
CGAGACTGTTATTTGTTGGAAGAAAAGGAACGTCTCAAAGAAGAATGGTCCCTTTTTAAA
GAGCAGAAAAAGAATTTTGAGAGGGAGAGACGAAGCTTTACAGAAGCCGCTATTCGCCTG
GGATTGGAGAGAAAGGCATTTGAAGAAGAAAGAGCCAGTTGGTTAAAGCAGCAGTTTCTA
AATATGACTACCTTTGACCACCAGAACTCAGAAAATGTGAAACTTTTCAGTGCCTTCTCA
GGAAGTTCTGATTGGGACAATCTTATAGTGCACTCGAGGCAGCCGCAAAAGAAGCCTCAC
AGTGTGTCTAATGGGTCTCCAGTTTGCATGTCTAAACTTACTAAATCTCTTCCTGCTTCA
CCTTCCACTTCAGACTTTTGCCAGACACGTTCCTGCATATCTGAACATAGTTCAATCAAT
GTACTGAATATAACTGCTGAAGAAATTAAACCAAATCAGGTTGGAGGAGAATGTACAAAT
CAAAAATGGAGTGTGGCATCAAGACCTGGATCACAGGAAGGTTGCTATAGTGGATGCTCC
TTGAGCTACACAAATTCTCATGTAGAAAAAGATGACTTACCT

ORF Protein

Cloned ORF protein sequence for pFN21ASDA0923 Download

>KIAA0923  614 aa
MGDWMTVTDPGLSSESKTISQYTSETKMSPSSLYSQQVLCSSIPLSKNVHSFFSAFCTED
NIEQSISYLDQELTTFGFPSLYEESKGKETKRELNIVAVLNCMNELLVLQRKNLLAQENV
ETQNLKLGSDMDHLQSCYSKLKEQLETSRREMIGLQERDRQLQCKNRNLHQLLKNEKDEV
QKLQNIIASRATQYNHDMKRKEREYNKLKERLHQLVMNKKDKKIAMDILNYVGRADGKRG
SWRTGKTEARNEDEMYKILLNDYEYRQKQILMENAELKKVLQQMKKEMISLLSPQKKKPR
ERVDDSTGTVISDVEEDAGELSRESMWDLSCETVREQLTNSIRKQWRILKSHVEKLDNQV
SKVHLEGFNDEDVISRQDHEQETEKLELEIQQCKEMIKTQQQLLQQQLATAYDDDTTSLL
RDCYLLEEKERLKEEWSLFKEQKKNFERERRSFTEAAIRLGLERKAFEEERASWLKQQFL
NMTTFDHQNSENVKLFSAFSGSSDWDNLIVHSRQPQKKPHSVSNGSPVCMSKLTKSLPAS
PSTSDFCQTRSCISEHSSINVLNITAEEIKPNQVGGECTNQKWSVASRPGSQEGCYSGCS
LSYTNSHVEKDDLP

ORF+Vector

Nucleotide Sequence (with vector) for pFN21ASDA0923 Download

>pFN21ASDA0923  6571 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCTTTCGAAGGAGATAGAACCATGGGAGATTGGATGAC
TGTTACAGATCCAGGTCTGTCTTCAGAAAGCAAAACTATCTCTCAATATACCTCAGAAAC
AAAGATGTCTCCATCAAGTTTATACTCACAGCAAGTGCTATGTTCTTCAATACCTTTATC
GAAAAATGTGCACAGTTTTTTCAGTGCCTTCTGCACAGAAGATAATATTGAACAGAGTAT
CTCATATCTTGATCAGGAATTGACTACTTTTGGTTTTCCTTCATTATATGAAGAATCCAA
AGGTAAAGAGACAAAGAGAGAGTTAAATATAGTAGCTGTACTAAATTGTATGAATGAGCT
GCTTGTGCTTCAGCGGAAGAACCTTCTAGCTCAGGAAAATGTGGAGACACAGAATTTGAA
GCTGGGAAGTGATATGGACCATCTACAGAGCTGCTACTCAAAACTTAAGGAACAACTGGA
AACCTCCAGGAGGGAAATGATTGGGCTTCAGGAAAGAGACAGACAGTTACAATGTAAGAA
CAGGAATTTGCATCAGCTACTAAAGAATGAGAAAGATGAGGTGCAAAAATTACAAAATAT
CATTGCAAGTCGAGCTACTCAGTATAATCATGATATGAAGAGAAAAGAGCGTGAATATAA
TAAACTGAAGGAACGTCTACATCAACTTGTTATGAACAAGAAAGATAAGAAAATAGCTAT
GGACATTTTGAATTATGTCGGGAGAGCTGATGGAAAAAGAGGCTCCTGGAGGACTGGTAA
AACTGAAGCCAGGAATGAAGATGAAATGTATAAAATTCTCTTGAATGATTATGAATATCG
TCAGAAACAAATCCTAATGGAAAATGCAGAACTTAAGAAGGTTCTTCAACAAATGAAAAA
GGAAATGATTTCTCTTCTTTCTCCCCAAAAGAAGAAACCTAGAGAAAGAGTAGATGATAG
TACAGGAACTGTTATTTCCGATGTTGAAGAAGATGCCGGGGAACTAAGCAGAGAGAGTAT
GTGGGACCTTTCCTGTGAAACTGTGAGAGAGCAGCTTACAAACAGCATCAGAAAACAGTG
GAGAATTTTGAAAAGTCATGTAGAAAAGCTTGATAACCAAGTTTCAAAGGTACACCTGGA
AGGTTTTAATGATGAAGATGTAATCTCACGACAAGACCATGAACAAGAAACTGAAAAACT
CGAGTTAGAAATTCAGCAGTGTAAAGAAATGATTAAAACTCAGCAACAGCTTTTACAGCA
GCAGCTCGCTACTGCATATGATGATGATACCACTTCACTATTACGAGACTGTTATTTGTT
GGAAGAAAAGGAACGTCTCAAAGAAGAATGGTCCCTTTTTAAAGAGCAGAAAAAGAATTT
TGAGAGGGAGAGACGAAGCTTTACAGAAGCCGCTATTCGCCTGGGATTGGAGAGAAAGGC
ATTTGAAGAAGAAAGAGCCAGTTGGTTAAAGCAGCAGTTTCTAAATATGACTACCTTTGA
CCACCAGAACTCAGAAAATGTGAAACTTTTCAGTGCCTTCTCAGGAAGTTCTGATTGGGA
CAATCTTATAGTGCACTCGAGGCAGCCGCAAAAGAAGCCTCACAGTGTGTCTAATGGGTC
TCCAGTTTGCATGTCTAAACTTACTAAATCTCTTCCTGCTTCACCTTCCACTTCAGACTT
TTGCCAGACACGTTCCTGCATATCTGAACATAGTTCAATCAATGTACTGAATATAACTGC
TGAAGAAATTAAACCAAATCAGGTTGGAGGAGAATGTACAAATCAAAAATGGAGTGTGGC
ATCAAGACCTGGATCACAGGAAGGTTGCTATAGTGGATGCTCCTTGAGCTACACAAATTC
TCATGTAGAAAAAGATGACTTACCTTACGTAGTTTAAACGAATTCGGGCTCGGTACCCGG
GGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAA
AGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGG
CCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATG
CAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATT
ATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAG
GGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAA
TTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACA
TTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACG
TCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATA
CATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGA
AAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCA
TTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGAT
CAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAG
AGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGC
GCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCT
CAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACA
GTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTT
CTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCAT
GTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGT
GACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTA
CTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGA
CCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGT
GAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATC
GTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCT
GAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCC
AACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACG
CAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGT
TGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAA
GTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCT
CCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCC
CTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGG
TCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCT
TATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAG
CAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGA
AGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGA
AGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTG
GTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAG
AAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAG
GGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAA
ATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAG
CTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATA
CGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTA
CCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTA
TGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCC
ACGATGCGTCCGGCGTAGAGGATCGAGATCT