CYTH4 ORF clone pFN21AF0017

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AF0017

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Clone info.

Species

human

Clone Name

pFN21AF0017 Sequence (with vector) Restriction Map

Product ID

FHC03384

Flexi Clone PID

FXC03384

ORF Sequence

DNA sequence (1182 bp)
Protein sequence (394 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463181]

Gene

FLJ00017

Symbol

CYTH4

Alias : CYT4, DJ63G5.1, PSCD4, cytohesin-4

Description

cytohesin 4

Original Clone ID

oc00005

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1182 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 394 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13946.1 7e-158 100.0 CYTH4 CCDS5346.1 3.6e-115 73.1 CYTH3 CCDS12722.1 7.9e-112 69.6 CYTH2 CCDS32754.1 4.2e-111 70.5 CYTH1 CCDS42392.2 2.3e-110 70.4 CYTH1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000904 61 243 PF01369 SEC7-like IPR001849 262 374 PF00169 Pleckstrin homology domain HMMSmart IPR000904 58 243 SM00222 SEC7-like IPR001849 260 377 SM00233 Pleckstrin homology domain ProfileScan IPR000904 54 241 PS50190 SEC7-like IPR001849 259 375 PS50003 Pleckstrin homology domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_037517 394 606514 100.0 100.0 NP_001304953 337 606514 100.0 85.5 XP_011528449 337 606514 100.0 85.5 NP_004218 399 605081 73.1 98.2 XP_006723535 421 602488 69.4 98.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AF0017 Download

>FLJ00017  1182 bp
ATGGACCTGTGCCACCCAGAGCCCGCGGAGCTGAGCAGCGGGGAGACGGAAGAGTTACAG
AGGATCAAGTGGCACCGAAAGCAGCTCCTGGAGGACATCCAGAAGCTGAAGGATGAGATT
GCAGATGTGTTTGCCCAAATCGACTGCTTCGAGAGTGCGGAGGAGAGCCGGATGGCCCAG
AAGGAGAAGGAGCTGTGTATTGGGCGCAAGAAGTTCAACATGGACCCCGCCAAGGGTATC
CAGTATTTCATTGAGCACAAGCTGCTGACCCCTGACGTCCAGGACATTGCACGGTTCCTG
TATAAAGGCGAGGGCCTCAACAAGACAGCCATTGGTACCTACCTGGGGGAGAGGGATCCC
ATCAACCTGCAGGTCCTCCAGGCCTTCGTGGACTGCCACGAGTTCGCCAACCTCAACCTC
GTCCAGGCCCTCAGGCAGTTCCTGTGGAGCTTCCGGCTGCCGGGCGAGGCCCAGAAGATA
GACCGGATGATGGAGGCCTTTGCCACTCGATACTGCCTCTGCAACCCAGGCGTCTTCCAG
TCCACAGACACCTGCTACGTGTTGTCCTTCTCCATCATCATGCTCAACACCAGCCTCCAC
AATCCCAACGTCCGGGACAGGCCGCCTTTCGAGCGCTTTGTGTCCATGAACCGCGGCATC
AACAATGGTAGCGACCTGCCCGAGGACCAGCTGCGGAACCTCTTCGACAGCATCAAGAGT
GAGCCATTCTCCATCCCTGAGGACGACGGCAATGACCTCACTCACACCTTCTTCAATCCA
GACCGGGAGGGTTGGCTGCTCAAGCTAGGGGGCCGCGTGAAGACGTGGAAACGGCGCTGG
TTCATCCTGACCGACAACTGCCTCTACTACTTCGAGTTCACCACTGACAAGGAGCCACGG
GGAATTATACCTCTTGAGAACCTCTCGGTGCAGAAGGTGGATGACCCCAAGAAGCCATTC
TGCCTGGAGCTCTACAACCCTAGCTGCCGAGGCCAGAAAATCAAGGCCTGCAAGACCGAT
GGCGACGGCAGGGTGGTGGAGGGCAAGCACGAATCGTACCGCATCTCAGCCACCAGTGCC
GAGGAACGTGACCAGTGGATCGAGTCCATCCGAGCCAGCATCACCCGTGTCCCCTTCTAC
GACCTGGTCTCTACTCGGAAGAAGAAGATTGCCAGCAAGCAG

ORF Protein

Cloned ORF protein sequence for pFN21AF0017 Download

>FLJ00017  394 aa
MDLCHPEPAELSSGETEELQRIKWHRKQLLEDIQKLKDEIADVFAQIDCFESAEESRMAQ
KEKELCIGRKKFNMDPAKGIQYFIEHKLLTPDVQDIARFLYKGEGLNKTAIGTYLGERDP
INLQVLQAFVDCHEFANLNLVQALRQFLWSFRLPGEAQKIDRMMEAFATRYCLCNPGVFQ
STDTCYVLSFSIIMLNTSLHNPNVRDRPPFERFVSMNRGINNGSDLPEDQLRNLFDSIKS
EPFSIPEDDGNDLTHTFFNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEFTTDKEPR
GIIPLENLSVQKVDDPKKPFCLELYNPSCRGQKIKACKTDGDGRVVEGKHESYRISATSA
EERDQWIESIRASITRVPFYDLVSTRKKKIASKQ

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AF0017 Download

>pFN21AF0017  5887 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGACCTGTGCCACCCAGAGCCCGCGGAGCTGAG
CAGCGGGGAGACGGAAGAGTTACAGAGGATCAAGTGGCACCGAAAGCAGCTCCTGGAGGA
CATCCAGAAGCTGAAGGATGAGATTGCAGATGTGTTTGCCCAAATCGACTGCTTCGAGAG
TGCGGAGGAGAGCCGGATGGCCCAGAAGGAGAAGGAGCTGTGTATTGGGCGCAAGAAGTT
CAACATGGACCCCGCCAAGGGTATCCAGTATTTCATTGAGCACAAGCTGCTGACCCCTGA
CGTCCAGGACATTGCACGGTTCCTGTATAAAGGCGAGGGCCTCAACAAGACAGCCATTGG
TACCTACCTGGGGGAGAGGGATCCCATCAACCTGCAGGTCCTCCAGGCCTTCGTGGACTG
CCACGAGTTCGCCAACCTCAACCTCGTCCAGGCCCTCAGGCAGTTCCTGTGGAGCTTCCG
GCTGCCGGGCGAGGCCCAGAAGATAGACCGGATGATGGAGGCCTTTGCCACTCGATACTG
CCTCTGCAACCCAGGCGTCTTCCAGTCCACAGACACCTGCTACGTGTTGTCCTTCTCCAT
CATCATGCTCAACACCAGCCTCCACAATCCCAACGTCCGGGACAGGCCGCCTTTCGAGCG
CTTTGTGTCCATGAACCGCGGCATCAACAATGGTAGCGACCTGCCCGAGGACCAGCTGCG
GAACCTCTTCGACAGCATCAAGAGTGAGCCATTCTCCATCCCTGAGGACGACGGCAATGA
CCTCACTCACACCTTCTTCAATCCAGACCGGGAGGGTTGGCTGCTCAAGCTAGGGGGCCG
CGTGAAGACGTGGAAACGGCGCTGGTTCATCCTGACCGACAACTGCCTCTACTACTTCGA
GTTCACCACTGACAAGGAGCCACGGGGAATTATACCTCTTGAGAACCTCTCGGTGCAGAA
GGTGGATGACCCCAAGAAGCCATTCTGCCTGGAGCTCTACAACCCTAGCTGCCGAGGCCA
GAAAATCAAGGCCTGCAAGACCGATGGCGACGGCAGGGTGGTGGAGGGCAAGCACGAATC
GTACCGCATCTCAGCCACCAGTGCCGAGGAACGTGACCAGTGGATCGAGTCCATCCGAGC
CAGCATCACCCGTGTCCCCTTCTACGACCTGGTCTCTACTCGGAAGAAGAAGATTGCCAG
CAAGCAGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAG
GCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCA
CCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGA
TACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGT
GAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAAC
AACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTA
AGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTT
GCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTC
TGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAAT
GTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATG
AGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAA
CATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCAC
CCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTAC
ATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTT
CCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCC
GGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCA
CCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCC
ATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAG
GAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAA
CCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATG
GCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAA
TTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCG
GCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATT
GCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGT
CAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAG
CATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGG
CGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAG
GCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCC
GCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAG
GACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGA
CCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTC
ATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTG
TGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGT
CCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCA
GAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACA
CTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAG
TTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCA
AGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGG
GGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAA
AAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGC
CCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAA
TGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGAT
TGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCT
GAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCC
CTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATC
GAGATCT