SAMD4A ORF clone pFN21AE6786

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE6786

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Clone info.

Species

human

Clone Name

pFN21AE6786 Sequence (with vector) Restriction Map

Product ID

FHC15706

ORF Sequence

DNA sequence (1887 bp)
Protein sequence (629 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6786

Symbol

SAMD4A

Alias : SAMD4, SMAUG, SMAUG1, SMG, SMGA

Description

sterile alpha motif domain containing 4A

Original Clone ID

oc96786

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1887 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 629 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS55917.2 1.9e-200 100.0 SAMD4A CCDS32084.2 6.7e-122 86.5 SAMD4A CCDS55918.1 1.8e-84 89.4 SAMD4A CCDS77295.1 6.6e-36 55.0 SAMD4B CCDS33020.1 6.6e-36 55.0 SAMD4B The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR021129 235 292 PF00536 Sterile alpha motif HMMSmart IPR001660 231 294 SM00454 Sterile alpha motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001155048 630 610747 100.0 100.0 NP_056404 718 610747 86.5 91.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6786 Download

>KIEE6786  1887 bp
ATGTTTCGCGACCAGGTCGGGGTGCTGGCGGGCTGGTTTAAGGGCTGGAACGAGTGCGAG
CAGACTGTTGCGCTGCTGTCGCTGCTCAAGCGCGTGAGCCAGACCCAGGCCCGCTTCCTC
CAGCTCTGCCTGGAGCACTCGCTGGCCGACTGCGCCGAGCTGCACGTCCTCGAACGCGAG
GCCAACAGCCCCGGAATCATTAACCAATGGCAACAGGAATCCAAGGATAAAGTGATTTCC
CTCCTGTTAACTCATCTGCCTTTGTTGAAGCCAGGAAACCTCGACGCGAAAGTAGAATAT
ATGAAACTGCTGCCCAAAATCCTGGCTCACTCTATTGAACACAACCAGCACATTGAGGAG
AGCAGGCAGCTGCTGTCCTATGCTTTGATACATCCAGCCACTTCGTTAGAAGACCGTAGT
GCTTTAGCCATGTGGCTGAATCACTTGGAGGACCGCACGTCGACCAGCTTTGGTGGCCAG
AACCGAGGCCGCTCAGACTCTGTGGATTATGGACAGACACACTACTATCACCAAAGACAG
AACTCTGATGACAAGCTCAATGGGTGGCAGAACTCTCGGGATTCTGGGATTTGCATCAAT
GCCTCCAACTGGCAGGACAAAAGCATGGGGTGTGAGAATGGCCATGTGCCCCTCTACTCC
TCCTCATCTGTCCCCACCACAATCAATACGATTGGAACCAGCACAAGTACAAATGTTCCA
GCCTGGCTGAAAAGCCTCCGCCTGCACAAATATGCCGCGCTTTTCTCCCAGATGACCTAT
GAGGAGATGATGGCCCTCACCGAGTGCCAGCTGGAGGCGCAGAATGTTACCAAAGGTGCA
AGACACAAAATTGTCATCAGTATTCAGAAGCTCAAAGAAAGACAAAATCTCCTGAAGTCT
TTGGAAAGGGACATCATCGAGGGGGGCAGCCTGCGCATCCCGCTCCAGGAACTGCACCAG
ATGATCCTGACTCCGATCAAGGCCTACAGCTCCCCGAGCACCACCCCCGAGGCTCGCCGC
CGGGAGCCCCAGGCCCCGCGTCAGCCCTCACTGATGGGCCCCGAGAGCCAGAGCCCCGAC
TGCAAAGATGGGGCCGCAGCCACTGGCGCCACGGCCACCCCCTCGGCCGGGGCCAGCGGG
GGGCTCCAGCCGCACCAGCTGAGCAGCTGCGATGGGGAGCTGGCCGTCGCCCCCCTGCCA
GAGGGGGACCTCCCCGGGCAGTTCACACGCGTCATGGGGAAAGTGTGCACACAGCTCTTG
GTCTCCAGACCTGATGAGGAAAATATAAGTTCCTATTTACAGCTCATAGACAAGTGTCTA
ATTCATGAGGCATTTACAGAGACACAGAAAAAAAGATTGTTGTCATGGAAACAGCAGGTG
CAGAAGCTCTTTCGGTCTTTCCCTCGGAAAACCCTTCTAGACATATCAGGATATCGACAG
CAAAGAAATCGAGGCTTTGGGCAATCCAACTCCCTCCCGACGGCTGGCTCTGTGGGCGGT
GGCATGGGCAGACGGAACCCGCGCCAGTACCAGATCCCCTCTCGGAACGTCCCTTCCGCC
CGCCTGGGCCTCTTGGGCACCAGTGGATTCGTCAGCTCCAACCAGCGCAACACCACAGCT
ACCCCCACCATCATGAAACAAGGAAGACAGAACCTGTGGTTTGCCAACCCCGGGGGCAGC
AATAGCATGCCAAGCCGCACCCACAGCTCAGTCCAGAGGACCCGCTCGCTGCCCGTGCAC
ACTTCCCCACAGAACATGCTGATGTTCCAGCAGCCAGAATTCCAGCTTCCCGTGACCGAA
CCTGACATCAACAACAGGCTGGAGTCGTTGTGCCTCAGTATGACCGAACACGCCCTGGGA
GACGGGGTTGACCGGACCTCCACCATC

ORF Protein

Cloned ORF protein sequence for pFN21AE6786 Download

>KIEE6786  629 aa
MFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLERE
ANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIEE
SRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGGQNRGRSDSVDYGQTHYYHQRQ
NSDDKLNGWQNSRDSGICINASNWQDKSMGCENGHVPLYSSSSVPTTINTIGTSTSTNVP
AWLKSLRLHKYAALFSQMTYEEMMALTECQLEAQNVTKGARHKIVISIQKLKERQNLLKS
LERDIIEGGSLRIPLQELHQMILTPIKAYSSPSTTPEARRREPQAPRQPSLMGPESQSPD
CKDGAAATGATATPSAGASGGLQPHQLSSCDGELAVAPLPEGDLPGQFTRVMGKVCTQLL
VSRPDEENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLLDISGYRQ
QRNRGFGQSNSLPTAGSVGGGMGRRNPRQYQIPSRNVPSARLGLLGTSGFVSSNQRNTTA
TPTIMKQGRQNLWFANPGGSNSMPSRTHSSVQRTRSLPVHTSPQNMLMFQQPEFQLPVTE
PDINNRLESLCLSMTEHALGDGVDRTSTI

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6786 Download

>pFN21AE6786  6592 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTTTCGCGACCAGGTCGGGGTGCTGGCGGGCTG
GTTTAAGGGCTGGAACGAGTGCGAGCAGACTGTTGCGCTGCTGTCGCTGCTCAAGCGCGT
GAGCCAGACCCAGGCCCGCTTCCTCCAGCTCTGCCTGGAGCACTCGCTGGCCGACTGCGC
CGAGCTGCACGTCCTCGAACGCGAGGCCAACAGCCCCGGAATCATTAACCAATGGCAACA
GGAATCCAAGGATAAAGTGATTTCCCTCCTGTTAACTCATCTGCCTTTGTTGAAGCCAGG
AAACCTCGACGCGAAAGTAGAATATATGAAACTGCTGCCCAAAATCCTGGCTCACTCTAT
TGAACACAACCAGCACATTGAGGAGAGCAGGCAGCTGCTGTCCTATGCTTTGATACATCC
AGCCACTTCGTTAGAAGACCGTAGTGCTTTAGCCATGTGGCTGAATCACTTGGAGGACCG
CACGTCGACCAGCTTTGGTGGCCAGAACCGAGGCCGCTCAGACTCTGTGGATTATGGACA
GACACACTACTATCACCAAAGACAGAACTCTGATGACAAGCTCAATGGGTGGCAGAACTC
TCGGGATTCTGGGATTTGCATCAATGCCTCCAACTGGCAGGACAAAAGCATGGGGTGTGA
GAATGGCCATGTGCCCCTCTACTCCTCCTCATCTGTCCCCACCACAATCAATACGATTGG
AACCAGCACAAGTACAAATGTTCCAGCCTGGCTGAAAAGCCTCCGCCTGCACAAATATGC
CGCGCTTTTCTCCCAGATGACCTATGAGGAGATGATGGCCCTCACCGAGTGCCAGCTGGA
GGCGCAGAATGTTACCAAAGGTGCAAGACACAAAATTGTCATCAGTATTCAGAAGCTCAA
AGAAAGACAAAATCTCCTGAAGTCTTTGGAAAGGGACATCATCGAGGGGGGCAGCCTGCG
CATCCCGCTCCAGGAACTGCACCAGATGATCCTGACTCCGATCAAGGCCTACAGCTCCCC
GAGCACCACCCCCGAGGCTCGCCGCCGGGAGCCCCAGGCCCCGCGTCAGCCCTCACTGAT
GGGCCCCGAGAGCCAGAGCCCCGACTGCAAAGATGGGGCCGCAGCCACTGGCGCCACGGC
CACCCCCTCGGCCGGGGCCAGCGGGGGGCTCCAGCCGCACCAGCTGAGCAGCTGCGATGG
GGAGCTGGCCGTCGCCCCCCTGCCAGAGGGGGACCTCCCCGGGCAGTTCACACGCGTCAT
GGGGAAAGTGTGCACACAGCTCTTGGTCTCCAGACCTGATGAGGAAAATATAAGTTCCTA
TTTACAGCTCATAGACAAGTGTCTAATTCATGAGGCATTTACAGAGACACAGAAAAAAAG
ATTGTTGTCATGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTTCCCTCGGAAAACCCT
TCTAGACATATCAGGATATCGACAGCAAAGAAATCGAGGCTTTGGGCAATCCAACTCCCT
CCCGACGGCTGGCTCTGTGGGCGGTGGCATGGGCAGACGGAACCCGCGCCAGTACCAGAT
CCCCTCTCGGAACGTCCCTTCCGCCCGCCTGGGCCTCTTGGGCACCAGTGGATTCGTCAG
CTCCAACCAGCGCAACACCACAGCTACCCCCACCATCATGAAACAAGGAAGACAGAACCT
GTGGTTTGCCAACCCCGGGGGCAGCAATAGCATGCCAAGCCGCACCCACAGCTCAGTCCA
GAGGACCCGCTCGCTGCCCGTGCACACTTCCCCACAGAACATGCTGATGTTCCAGCAGCC
AGAATTCCAGCTTCCCGTGACCGAACCTGACATCAACAACAGGCTGGAGTCGTTGTGCCT
CAGTATGACCGAACACGCCCTGGGAGACGGGGTTGACCGGACCTCCACCATCGTTTAAAC
GAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATC
CGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAAC
TAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTT
GGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCT
ATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATT
CATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTC
TACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTC
CAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTC
TACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCT
ATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGA
TAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCC
CTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTG
AAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTC
AACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACT
TTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTC
GGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAG
CATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGAT
AACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTT
TTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAA
GCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGC
AAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATG
GAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATT
GCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCA
GATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGAT
GAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAA
ATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTAT
CCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCA
GGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGC
ATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACC
AGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCG
GATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTA
GGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCG
TTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGAC
ACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAG
GCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTAT
TTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGAT
CCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGC
GCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGT
GGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCT
AGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGG
TGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCT
CTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCG
GGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCG
GTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAG
ATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT