SNX8 ORF clone pFN21AE6423

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE6423

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Clone info.

Species

human

Clone Name

pFN21AE6423 Sequence (with vector) Restriction Map

Product ID

FHC10138

ORF Sequence

DNA sequence (1395 bp)
Protein sequence (465 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6423

Symbol

SNX8

Alias : Mvp1

Description

sorting nexin 8

Original Clone ID

oc96423

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1395 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 465 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5331.1 3.7e-158 100.0 SNX8 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001683 84 178 PF00787 Phox homologous domain HMMSmart IPR001683 65 178 SM00312 Phox homologous domain ProfileScan IPR001683 73 181 PS50195 Phox homologous domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_037453 465 614905 100.0 100.0 XP_011513632 451 614905 100.0 93.5 XP_011513631 457 614905 99.8 93.5 XP_016867573 412 614905 100.0 88.6 XP_016867572 412 614905 100.0 88.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6423 Download

>KIEE6423  1395 bp
ATGACTGGCCGCGCGATGGACCCGCTGCCCGCGGCTGCAGTCGGGGCGGCAGCTGAGGCG
GAGGCTGACGAGGAGGCGGATCCCCCGGCGTCAGATCTGCCGACACCCCAGGCCATCGAG
CCCCAGGCCATCGTGCAGCAGGTCCCAGCCCCCAGTCGAATGCAGATGCCGCAGGGGAAC
CCGCTGCTGCTGTCCCACACCCTGCAGGAGCTGCTGGCCAGGGACACCGTGCAGGTGGAG
CTCATTCCGGAGAAGAAGGGCCTCTTCCTGAAGCATGTGGAGTATGAGGTTTCCAGCCAG
CGCTTCAAGTCCTCGGTATACAGACGGTACAATGACTTCGTGGTCTTCCAGGAGATGCTC
CTGCACAAGTTCCCCTACCGTATGGTGCCTGCCCTGCCACCCAAGAGAATGCTGGGAGCT
GACAGGGAGTTCATCGAGGCCAGGAGGAGAGCCCTGAAGCGCTTCGTCAACCTGGTGGCG
CGACACCCCCTGTTCTCCGAGGATGTGGTCCTCAAGCTCTTCCTGTCCTTCAGCGGCTCG
GATGTGCAGAACAAGTTAAAGGAGTCAGCACAGTGCGTCGGGGACGAATTCCTGAACTGT
AAGCTGGCTACCAGGGCCAAGGACTTCCTCCCAGCTGACATCCAGGCTCAGTTTGCCATC
AGCCGGGAGCTGATCCGGAACATCTACAATAGCTTTCACAAGCTTCGCGACAGGGCCGAG
CGGATCGCGTCGCGGGCCATCGACAATGCGGCAGATCTTCTCATATTCGGGAAGGAGCTA
AGTGCAATAGGGTCTGACACGACCCCGCTGCCCTCCTGGGCCGCTCTGAATAGCAGCACG
TGGGGGTCCCTGAAGCAGGCTCTGAAAGGCCTGTCTGTGGAATTCGCGCTGCTCGCCGAC
AAGGCTGCACAACAGGGTAAGCAGGAAGAGAACGACGTGGTGGAGAAGCTGAACCTCTTC
TTGGATCTGCTGCAGTCCTATAAGGACCTGTGCGAGCGGCATGAGAAGGGCGTGTTGCAC
AAGCACCAGCGGGCCCTGCACAAGTACAGCCTGATGAAGAGGCAGATGATGAGCGCCACC
GCGCAGAACCGCGAGCCGGAGTCCGTGGAGCAGCTGGAGTCCCGCATCGTGGAGCAGGAG
AACGCGATTCAGACGATGGAGCTGCGGAACTACTTCTCCCTGTACTGCCTGCACCAGGAG
ACGCAGCTCATCCACGTCTACCTGCCCCTCACCTCCCACATCCTCCGCGCCTTCGTCAAC
TCTCAGATCCAAGGGCACAAGGAGATGAGCAAGGTGTGGAACGACCTGAGGCCCAAGCTC
AGCTGCCTCTTTGCGGGACCACACAGCACCCTGACCCCACCGTGCTCCCCGCCGGAGGAC
GGCCTGTGTCCTCAC

ORF Protein

Cloned ORF protein sequence for pFN21AE6423 Download

>KIEE6423  465 aa
MTGRAMDPLPAAAVGAAAEAEADEEADPPASDLPTPQAIEPQAIVQQVPAPSRMQMPQGN
PLLLSHTLQELLARDTVQVELIPEKKGLFLKHVEYEVSSQRFKSSVYRRYNDFVVFQEML
LHKFPYRMVPALPPKRMLGADREFIEARRRALKRFVNLVARHPLFSEDVVLKLFLSFSGS
DVQNKLKESAQCVGDEFLNCKLATRAKDFLPADIQAQFAISRELIRNIYNSFHKLRDRAE
RIASRAIDNAADLLIFGKELSAIGSDTTPLPSWAALNSSTWGSLKQALKGLSVEFALLAD
KAAQQGKQEENDVVEKLNLFLDLLQSYKDLCERHEKGVLHKHQRALHKYSLMKRQMMSAT
AQNREPESVEQLESRIVEQENAIQTMELRNYFSLYCLHQETQLIHVYLPLTSHILRAFVN
SQIQGHKEMSKVWNDLRPKLSCLFAGPHSTLTPPCSPPEDGLCPH

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6423 Download

>pFN21AE6423  6100 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGACTGGCCGCGCGATGGACCCGCTGCCCGCGGC
TGCAGTCGGGGCGGCAGCTGAGGCGGAGGCTGACGAGGAGGCGGATCCCCCGGCGTCAGA
TCTGCCGACACCCCAGGCCATCGAGCCCCAGGCCATCGTGCAGCAGGTCCCAGCCCCCAG
TCGAATGCAGATGCCGCAGGGGAACCCGCTGCTGCTGTCCCACACCCTGCAGGAGCTGCT
GGCCAGGGACACCGTGCAGGTGGAGCTCATTCCGGAGAAGAAGGGCCTCTTCCTGAAGCA
TGTGGAGTATGAGGTTTCCAGCCAGCGCTTCAAGTCCTCGGTATACAGACGGTACAATGA
CTTCGTGGTCTTCCAGGAGATGCTCCTGCACAAGTTCCCCTACCGTATGGTGCCTGCCCT
GCCACCCAAGAGAATGCTGGGAGCTGACAGGGAGTTCATCGAGGCCAGGAGGAGAGCCCT
GAAGCGCTTCGTCAACCTGGTGGCGCGACACCCCCTGTTCTCCGAGGATGTGGTCCTCAA
GCTCTTCCTGTCCTTCAGCGGCTCGGATGTGCAGAACAAGTTAAAGGAGTCAGCACAGTG
CGTCGGGGACGAATTCCTGAACTGTAAGCTGGCTACCAGGGCCAAGGACTTCCTCCCAGC
TGACATCCAGGCTCAGTTTGCCATCAGCCGGGAGCTGATCCGGAACATCTACAATAGCTT
TCACAAGCTTCGCGACAGGGCCGAGCGGATCGCGTCGCGGGCCATCGACAATGCGGCAGA
TCTTCTCATATTCGGGAAGGAGCTAAGTGCAATAGGGTCTGACACGACCCCGCTGCCCTC
CTGGGCCGCTCTGAATAGCAGCACGTGGGGGTCCCTGAAGCAGGCTCTGAAAGGCCTGTC
TGTGGAATTCGCGCTGCTCGCCGACAAGGCTGCACAACAGGGTAAGCAGGAAGAGAACGA
CGTGGTGGAGAAGCTGAACCTCTTCTTGGATCTGCTGCAGTCCTATAAGGACCTGTGCGA
GCGGCATGAGAAGGGCGTGTTGCACAAGCACCAGCGGGCCCTGCACAAGTACAGCCTGAT
GAAGAGGCAGATGATGAGCGCCACCGCGCAGAACCGCGAGCCGGAGTCCGTGGAGCAGCT
GGAGTCCCGCATCGTGGAGCAGGAGAACGCGATTCAGACGATGGAGCTGCGGAACTACTT
CTCCCTGTACTGCCTGCACCAGGAGACGCAGCTCATCCACGTCTACCTGCCCCTCACCTC
CCACATCCTCCGCGCCTTCGTCAACTCTCAGATCCAAGGGCACAAGGAGATGAGCAAGGT
GTGGAACGACCTGAGGCCCAAGCTCAGCTGCCTCTTTGCGGGACCACACAGCACCCTGAC
CCCACCGTGCTCCCCGCCGGAGGACGGCCTGTGTCCTCACGTTTAAACGAATTCGGGCTC
GGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACA
AAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCC
TTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACA
ACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTT
GTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTT
CAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGT
AAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAG
TAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTT
TCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAA
TAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTT
TTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGAT
GCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAG
ATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTG
CTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATA
CACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGAT
GGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCC
AACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATG
GGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAAC
GACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACT
GGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAA
GTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCT
GGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCC
TCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGA
CAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAA
GCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAG
GGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAA
AGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATC
GACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCC
CTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCG
CCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTT
CGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACC
GCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGC
CACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAG
AGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCG
CTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAA
CCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAG
GATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACT
CACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAT
AGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAA
AAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAG
GTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTG
CCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATT
AAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGT
ACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT