OR6C68 ORF clone pFN21AE5978

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Halotag ORF Clone pFN21AE5978

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Clone info.

Species

human

Clone Name

pFN21AE5978 Sequence (with vector) Restriction Map

Product ID

FHC28146

ORF Sequence

DNA sequence (936 bp)
Protein sequence (312 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5978

Symbol

OR6C68

Description

olfactory receptor, family 6, subfamily C, member 68

Original Clone ID

cp95978

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 936 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 312 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31826.2 3.5e-78 100.0 OR6C68 CCDS31824.1 7.1e-61 74.7 OR6C2 CCDS31816.1 1.3e-52 63.8 OR6C74 CCDS31823.1 2.4e-52 64.7 OR6C76 CCDS31827.1 3.1e-51 62.4 OR6C4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 24 48 PR00237 GPCR IPR000276 57 78 PR00237 GPCR IPR000725 90 101 PR00245 Olfactory receptor IPR000276 102 124 PR00237 GPCR IPR000725 127 139 PR00245 Olfactory receptor IPR000276 138 159 PR00237 GPCR IPR000725 174 190 PR00245 Olfactory receptor IPR000276 197 220 PR00237 GPCR IPR000725 234 243 PR00245 Olfactory receptor IPR000276 270 296 PR00237 GPCR IPR000725 281 292 PR00245 Olfactory receptor HMMPfam IPR000276 42 288 PF00001 GPCR ProfileScan IPR017452 39 288 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 8 TTFILLGLTEDPQLQVLLFMFLF 30 SECONDARY 23 2 67 LEISFTATCVPRFLYSISTGNKI 89 SECONDARY 23 3 93 NACVIQLFFADLFGVTEFFLLAT 115 SECONDARY 23 4 136 NKVCKTMVICCWMAALMIILPPL 158 PRIMARY 23 5 199 ASAVLTFIITLVCVVLSYTYIIR 221 PRIMARY 23 6 238 TCSSHITVVSITYGSCIFIYIKP 260 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006628 314 608496 41.3 97.1 NP_036492 312 603232 40.0 97.8 XP_011520809 312 603232 40.0 97.8 XP_011520808 322 603232 40.0 97.8 NP_835462 317 608493 41.0 97.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5978 Download

>KIEE5978  936 bp
ATGAGAAAACACACAGCAATAACAACATTCATCCTTCTGGGACTGACAGAAGATCCTCAG
CTGCAGGTTCTGCTTTTCATGTTTCTATTTATCACCTACATGTTGAGTGTAACAGGGAAA
CTGACCATTATCGCCCTCACCATGTTGGATCCCCACCTGAAAACACCCATGTATTTTTTT
CTCCAAAATTTATCTTTCTTAGAAATCTCATTTACAGCTACCTGTGTTCCAAGATTCTTA
TACAGTATCTCAACTGGGAACAAAATAATAACGTATAATGCATGTGTCATTCAGCTATTT
TTTGCAGACCTCTTTGGGGTAACTGAATTTTTTCTTTTGGCTACCATGTCATATGATCGC
TATGTGGCCATCTGCAAACCCTTGCATTATATGGCAATCATGAGCAACAAAGTGTGCAAA
ACAATGGTTATTTGTTGTTGGATGGCAGCACTTATGATTATCCTCCCACCACTTAGCTTA
GGTTTTCATCTAGAATTCTGTGACTCTAATGTCATCAATCATTTTGGCTGTGATGCATTG
CCTATTCTGAAAATACCATGCTCAGACACATCATTAATTGAGCAGATGGTTGTAGCCTCT
GCTGTATTAACCTTTATTATCACTCTTGTATGTGTAGTTCTGTCCTACACATATATCATA
AGAACAATTCTAAAATTCCCTTCTGTTCAACAAAAGAAAAAAGCCTTTTCTACCTGTTCT
TCACATATTACTGTGGTTTCCATCACTTATGGCAGCTGCATCTTCATCTATATCAAGCCA
TCTGCAAAAGAAGAGGTAAACATTAATAAAGGTGTGTCAGTGCTTATTTCATCCATATCA
CCTATGTTGAATTCTTTCATATATACTCTTAGGAATGAGCAAGTTAAACAAGCCTTTCAT
GACTCACTCAAAAAAATTGCATTTCGTTTAAAAAAG

ORF Protein

Cloned ORF protein sequence for pFN21AE5978 Download

>KIEE5978  312 aa
MRKHTAITTFILLGLTEDPQLQVLLFMFLFITYMLSVTGKLTIIALTMLDPHLKTPMYFF
LQNLSFLEISFTATCVPRFLYSISTGNKIITYNACVIQLFFADLFGVTEFFLLATMSYDR
YVAICKPLHYMAIMSNKVCKTMVICCWMAALMIILPPLSLGFHLEFCDSNVINHFGCDAL
PILKIPCSDTSLIEQMVVASAVLTFIITLVCVVLSYTYIIRTILKFPSVQQKKKAFSTCS
SHITVVSITYGSCIFIYIKPSAKEEVNINKGVSVLISSISPMLNSFIYTLRNEQVKQAFH
DSLKKIAFRLKK

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5978 Download

>pFN21AE5978  5641 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAGAAAACACACAGCAATAACAACATTCATCCT
TCTGGGACTGACAGAAGATCCTCAGCTGCAGGTTCTGCTTTTCATGTTTCTATTTATCAC
CTACATGTTGAGTGTAACAGGGAAACTGACCATTATCGCCCTCACCATGTTGGATCCCCA
CCTGAAAACACCCATGTATTTTTTTCTCCAAAATTTATCTTTCTTAGAAATCTCATTTAC
AGCTACCTGTGTTCCAAGATTCTTATACAGTATCTCAACTGGGAACAAAATAATAACGTA
TAATGCATGTGTCATTCAGCTATTTTTTGCAGACCTCTTTGGGGTAACTGAATTTTTTCT
TTTGGCTACCATGTCATATGATCGCTATGTGGCCATCTGCAAACCCTTGCATTATATGGC
AATCATGAGCAACAAAGTGTGCAAAACAATGGTTATTTGTTGTTGGATGGCAGCACTTAT
GATTATCCTCCCACCACTTAGCTTAGGTTTTCATCTAGAATTCTGTGACTCTAATGTCAT
CAATCATTTTGGCTGTGATGCATTGCCTATTCTGAAAATACCATGCTCAGACACATCATT
AATTGAGCAGATGGTTGTAGCCTCTGCTGTATTAACCTTTATTATCACTCTTGTATGTGT
AGTTCTGTCCTACACATATATCATAAGAACAATTCTAAAATTCCCTTCTGTTCAACAAAA
GAAAAAAGCCTTTTCTACCTGTTCTTCACATATTACTGTGGTTTCCATCACTTATGGCAG
CTGCATCTTCATCTATATCAAGCCATCTGCAAAAGAAGAGGTAAACATTAATAAAGGTGT
GTCAGTGCTTATTTCATCCATATCACCTATGTTGAATTCTTTCATATATACTCTTAGGAA
TGAGCAAGTTAAACAAGCCTTTCATGACTCACTCAAAAAAATTGCATTTCGTTTAAAAAA
GGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T