OR52L1 ORF clone pFN21AE5477

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Halotag ORF Clone pFN21AE5477

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Clone info.

Species

human

Clone Name

pFN21AE5477 Sequence (with vector) Restriction Map

Product ID

FHC30467

ORF Sequence

DNA sequence (987 bp)
Protein sequence (329 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5477

Symbol

OR52L1

Alias : OR11-50

Description

olfactory receptor, family 52, subfamily L, member 1

Original Clone ID

cp95477

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 987 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 329 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS44529.1 5.4e-95 99.7 OR52L1 CCDS31384.1 1.4e-47 53.7 OR52D1 CCDS31351.1 7.8e-47 52.4 OR52K2 CCDS31370.1 1.6e-46 49.4 OR52J3 CCDS31352.1 2.5e-46 52.1 OR52K1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 44 68 PR00237 GPCR IPR000276 77 98 PR00237 GPCR IPR000725 110 121 PR00245 Olfactory receptor IPR000276 122 144 PR00237 GPCR IPR000725 147 159 PR00245 Olfactory receptor IPR000725 194 210 PR00245 Olfactory receptor IPR000276 217 240 PR00237 GPCR IPR000725 254 263 PR00245 Olfactory receptor IPR000276 292 318 PR00237 GPCR IPR000725 303 314 PR00245 Olfactory receptor HMMPfam IPR000276 59 310 PF00001 GPCR ProfileScan IPR017452 59 310 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 10 LSKPLIMLLSNSSWRLSQPSFLL 32 SECONDARY 23 2 46 ALPLGILYLLALVGNVTILFIIW 68 PRIMARY 23 3 80 FLSMLAAINLVLASSTAPKALAV 102 PRIMARY 23 4 117 IQMFFIHAFSSMESGVLVAMALD 139 PRIMARY 23 5 157 GVIGRIGMVVLVRGLLLLIPFPI 179 PRIMARY 23 6 222 LLVIGLDVLAIGVSYAHILQAVL 244 PRIMARY 23 7 259 CGSHICVILVFYVPGIFSFLTHR 281 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_110401 320 611268 49.5 92.7 NP_689643 318 611267 48.1 94.2 XP_011520808 322 603232 33.1 94.8 NP_001005191 312 611538 32.2 91.2 XP_011520809 312 603232 33.3 89.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5477 Download

>KIEE5477  987 bp
ATGACTTTGGTTTCTTTTTTCTCTTTCCTCTCCAAGCCATTGATAATGCTCCTTAGCAAT
TCAAGCTGGAGGCTATCCCAGCCTTCTTTTCTCCTGGTAGGGATTCCAGGTTTAGAGGAA
AGCCAGCACTGGATTGCACTGCCCCTGGGCATCCTTTACCTCCTTGCTTTAGTGGGCAAT
GTTACCATTCTCTTCATCATCTGGATGGACCCATCCTTGCACCAATCTATGTACCTCTTC
CTGTCCATGCTAGCTGCCATCAACCTGGTTCTGGCCTCCTCCACTGCACCCAAAGCCCTT
GCAGTGCTCCTGGTTCATGCCCACGAGATTGGGTACATCGTCTGCCTGATCCAGATGTTC
TTCATCCATGCATTCTCCTCCATGGAGTCAGGGGTACTTGTGGCCATGGCTCTGGATCGC
TATGTAGCCATTTGTCACCCCTTGCACCATTCCACAATCCTGCATCCAGGGGTCATAGGG
CGCATCGGAATGGTGGTGCTGGTGAGGGGATTACTACTCCTTATCCCCTTCCCCATTTTG
TTGGGAACACTTATCTTCTGCCAAGCCACCATCATAGGCCATGCCTATTGTGAACATATG
GCTGTTGTGAAACTTGCCTGCTCAGAAACCACAGTCAATCGAGCTTATGGGCTGACTATG
GCCTTGCTTGTGATTGGGCTGGATGTTCTGGCCATTGGTGTTTCCTATGCCCACATCCTC
CAGGCAGTGCTGAAGGTACCAGGGAGTGAGGCCCGACTTAAGGCGTTTAGCACATGTGGC
TCTCATATTTGTGTCATCCTGGTCTTCTATGTCCCTGGAATTTTCTCCTTCCTCACTCAC
CGCTTTGGTCATCATGTACCCCATCATGTCCATGTTCTTCTGGCCACACGGTATCTCCTC
ATGCCACCTGCGCTCAATCCTCTTGTCTATGGAGTGAAGACTCAGCAGATCCGCCAGCGA
GTGCTCAGAGTGTTTACACAAAAGGAT

ORF Protein

Cloned ORF protein sequence for pFN21AE5477 Download

>KIEE5477  329 aa
MTLVSFFSFLSKPLIMLLSNSSWRLSQPSFLLVGIPGLEESQHWIALPLGILYLLALVGN
VTILFIIWMDPSLHQSMYLFLSMLAAINLVLASSTAPKALAVLLVHAHEIGYIVCLIQMF
FIHAFSSMESGVLVAMALDRYVAICHPLHHSTILHPGVIGRIGMVVLVRGLLLLIPFPIL
LGTLIFCQATIIGHAYCEHMAVVKLACSETTVNRAYGLTMALLVIGLDVLAIGVSYAHIL
QAVLKVPGSEARLKAFSTCGSHICVILVFYVPGIFSFLTHRFGHHVPHHVHVLLATRYLL
MPPALNPLVYGVKTQQIRQRVLRVFTQKD

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5477 Download

>pFN21AE5477  5692 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGACTTTGGTTTCTTTTTTCTCTTTCCTCTCCAA
GCCATTGATAATGCTCCTTAGCAATTCAAGCTGGAGGCTATCCCAGCCTTCTTTTCTCCT
GGTAGGGATTCCAGGTTTAGAGGAAAGCCAGCACTGGATTGCACTGCCCCTGGGCATCCT
TTACCTCCTTGCTTTAGTGGGCAATGTTACCATTCTCTTCATCATCTGGATGGACCCATC
CTTGCACCAATCTATGTACCTCTTCCTGTCCATGCTAGCTGCCATCAACCTGGTTCTGGC
CTCCTCCACTGCACCCAAAGCCCTTGCAGTGCTCCTGGTTCATGCCCACGAGATTGGGTA
CATCGTCTGCCTGATCCAGATGTTCTTCATCCATGCATTCTCCTCCATGGAGTCAGGGGT
ACTTGTGGCCATGGCTCTGGATCGCTATGTAGCCATTTGTCACCCCTTGCACCATTCCAC
AATCCTGCATCCAGGGGTCATAGGGCGCATCGGAATGGTGGTGCTGGTGAGGGGATTACT
ACTCCTTATCCCCTTCCCCATTTTGTTGGGAACACTTATCTTCTGCCAAGCCACCATCAT
AGGCCATGCCTATTGTGAACATATGGCTGTTGTGAAACTTGCCTGCTCAGAAACCACAGT
CAATCGAGCTTATGGGCTGACTATGGCCTTGCTTGTGATTGGGCTGGATGTTCTGGCCAT
TGGTGTTTCCTATGCCCACATCCTCCAGGCAGTGCTGAAGGTACCAGGGAGTGAGGCCCG
ACTTAAGGCGTTTAGCACATGTGGCTCTCATATTTGTGTCATCCTGGTCTTCTATGTCCC
TGGAATTTTCTCCTTCCTCACTCACCGCTTTGGTCATCATGTACCCCATCATGTCCATGT
TCTTCTGGCCACACGGTATCTCCTCATGCCACCTGCGCTCAATCCTCTTGTCTATGGAGT
GAAGACTCAGCAGATCCGCCAGCGAGTGCTCAGAGTGTTTACACAAAAGGATGTTTAAAC
GAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATC
CGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAAC
TAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTT
GGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCT
ATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATT
CATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTC
TACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTC
CAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTC
TACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCT
ATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGA
TAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCC
CTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTG
AAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTC
AACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACT
TTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTC
GGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAG
CATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGAT
AACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTT
TTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAA
GCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGC
AAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATG
GAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATT
GCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCA
GATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGAT
GAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAA
ATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTAT
CCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCA
GGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGC
ATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACC
AGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCG
GATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTA
GGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCG
TTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGAC
ACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAG
GCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTAT
TTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGAT
CCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGC
GCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGT
GGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCT
AGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGG
TGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCT
CTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCG
GGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCG
GTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAG
ATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT