Characterization of the cloned ORF
N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand
Length: 2214 bp
Restriction map A
Restriction map B
Genomic Structure
Length: 738 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)![]() |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
Prediction of transmembrane (TM) segments
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
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Cloned ORF Nucleotide sequence for pFN21AE1317 Download
>KIEE1317 2214 bp ATGCAGCCGAGGTGGGCCCAAGGGGCCACGATGTGGCTTGGAGTCCTGCTGACCCTTCTG CTCTGTTCAAGCCTTGAGGGTCAAGAAAACTCTTTCACAATCAACAGTGTTGACATGAAG AGCCTGCCGGACTGGACGGTGCAAAATGGGAAGAACCTGACCCTGCAGTGCTTCGCGGAT GTCAGCACCACCTCTCACGTCAAGCCTCAGCACCAGATGCTGTTCTATAAGGATGACGTG CTGTTTTACAACATCTCCTCCATGAAGAGCACAGAGAGTTATTTTATTCCTGAAGTCCGG ATCTATGACTCAGGGACATATAAATGTACTGTGATTGTGAACAACAAAGAGAAAACCACT GCAGAGTACCAGGTGTTGGTGGAAGGAGTGCCCAGTCCCAGGGTGACACTGGACAAGAAA GAGGCCATCCAAGGTGGGATCGTGAGGGTCAACTGTTCTGTCCCAGAGGAAAAGGCCCCA ATACACTTCACAATTGAAAAACTTGAACTAAATGAAAAAATGGTCAAGCTGAAAAGAGAG AAGAATTCTCGAGACCAGAATTTTGTGATACTGGAATTCCCCGTTGAGGAACAGGACCGC GTTTTATCCTTCCGATGTCAAGCTAGGATCATTTCTGGGATCCATATGCAGACCTCAGAA TCTACCAAGAGTGAACTGGTCACCGTGACGGAATCCTTCTCTACACCCAAGTTCCACATC AGCCCCACCGGAATGATCATGGAAGGAGCTCAGCTCCACATTAAGTGCACCATTCAAGTG ACTCACCTGGCCCAGGAGTTTCCAGAAATCATAATTCAGAAGGACAAGGCGATTGTGGCC CACAACAGACATGGCAACAAGGCTGTGTACTCAGTCATGGCCATGGTGGAGCACAGTGGC AACTACACGTGCAAAGTGGAGTCCAGCCGCATATCCAAGGTCAGCAGCATCGTGGTCAAC ATAACAGAACTATTTTCCAAGCCCGAACTGGAATCTTCCTTCACACATCTGGACCAAGGT GAAAGACTGAACCTGTCCTGCTCCATCCCAGGAGCACCTCCAGCCAACTTCACCATCCAG AAGGAAGATACGATTGTGTCACAGACTCAAGATTTCACCAAGATAGCCTCAAAGTCGGAC AGTGGGACGTATATCTGCACTGCAGGTATTGACAAAGTGGTCAAGAAAAGCAACACAGTC CAGATAGTCGTATGTGAAATGCTCTCCCAGCCCAGGATTTCTTATGATGCCCAGTTTGAG GTCATAAAAGGACAGACCATCGAAGTCCGTTGCGAATCGATCAGTGGAACTTTGCCTATT TCTTACCAACTTTTAAAAACAAGTAAAGTTTTGGAGAATAGTACCAAGAACTCAAATGAT CCTGCGGTATTCAAAGACAACCCCACTGAAGACGTCGAATACCAGTGTGTTGCAGATAAT TGCCATTCCCACGCCAAAATGTTAAGTGAGGTTCTGAGGGTGAAGGTGATAGCCCCGGTG GATGAGGTCCAGATTTCTATCCTGTCAAGTAAGGTGGTGGAGTCTGGAGAGGACATTGTG CTGCAATGTGCTGTGAATGAAGGATCTGGTCCCATCACCTATAAGTTTTACAGAGAAAAA GAGGGCAAACCCTTCTATCAAATGACCTCAAATGCCACCCAGGCATTTTGGACCAAGCAG AAGGCTAACAAGGAACAGGAGGGAGAGTATTACTGCACAGCCTTCAACAGAGCCAACCAC GCCTCCAGTGTCCCCAGAAGCAAAATACTGACAGTCAGAGTCATTCTTGCCCCATGGAAG AAAGGACTTATTGCAGTGGTTATCATCGGAGTGATCATTGCTCTCTTGATCATTGCGGCC AAATGTTATTTTCTGAGGAAAGCCAAGGCCAAGCAGATGCCAGTGGAAATGTCCAGGCCA GCAGTACCACTTCTGAACTCCAACAACGAGAAAATGTCAGATCCCAATATGGAAGCTAAC AGTCATTACGGTCACAATGACGATGTCGGAAACCATGCAATGAAACCAATAAATGATAAT AAAGAGCCTCTGAACTCAGACGTGCAGTACACGGAAGTTCAAGTGTCCTCAGCTGAGTCT CACAAAGATCTAGGAAAGAAGGACACAGAGACAGTGTACAGTGAAGTCCGGAAAGCTGTC CCTGATGCCGTGGAAAGCAGATACTCTAGAACGGAAGGCTCCCTTGATGGAACT
Cloned ORF protein sequence for pFN21AE1317 Download
>KIEE1317 738 aa MQPRWAQGATMWLGVLLTLLLCSSLEGQENSFTINSVDMKSLPDWTVQNGKNLTLQCFAD VSTTSHVKPQHQMLFYKDDVLFYNISSMKSTESYFIPEVRIYDSGTYKCTVIVNNKEKTT AEYQVLVEGVPSPRVTLDKKEAIQGGIVRVNCSVPEEKAPIHFTIEKLELNEKMVKLKRE KNSRDQNFVILEFPVEEQDRVLSFRCQARIISGIHMQTSESTKSELVTVTESFSTPKFHI SPTGMIMEGAQLHIKCTIQVTHLAQEFPEIIIQKDKAIVAHNRHGNKAVYSVMAMVEHSG NYTCKVESSRISKVSSIVVNITELFSKPELESSFTHLDQGERLNLSCSIPGAPPANFTIQ KEDTIVSQTQDFTKIASKSDSGTYICTAGIDKVVKKSNTVQIVVCEMLSQPRISYDAQFE VIKGQTIEVRCESISGTLPISYQLLKTSKVLENSTKNSNDPAVFKDNPTEDVEYQCVADN CHSHAKMLSEVLRVKVIAPVDEVQISILSSKVVESGEDIVLQCAVNEGSGPITYKFYREK EGKPFYQMTSNATQAFWTKQKANKEQEGEYYCTAFNRANHASSVPRSKILTVRVILAPWK KGLIAVVIIGVIIALLIIAAKCYFLRKAKAKQMPVEMSRPAVPLLNSNNEKMSDPNMEAN SHYGHNDDVGNHAMKPINDNKEPLNSDVQYTEVQVSSAESHKDLGKKDTETVYSEVRKAV PDAVESRYSRTEGSLDGT
Nucleotide Sequence (with vector) for pFN21AE1317 Download
>pFN21AE1317 6919 bp TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA CTTTCAGAGCGATAACGCGATCGCCATGCAGCCGAGGTGGGCCCAAGGGGCCACGATGTG GCTTGGAGTCCTGCTGACCCTTCTGCTCTGTTCAAGCCTTGAGGGTCAAGAAAACTCTTT CACAATCAACAGTGTTGACATGAAGAGCCTGCCGGACTGGACGGTGCAAAATGGGAAGAA CCTGACCCTGCAGTGCTTCGCGGATGTCAGCACCACCTCTCACGTCAAGCCTCAGCACCA GATGCTGTTCTATAAGGATGACGTGCTGTTTTACAACATCTCCTCCATGAAGAGCACAGA GAGTTATTTTATTCCTGAAGTCCGGATCTATGACTCAGGGACATATAAATGTACTGTGAT TGTGAACAACAAAGAGAAAACCACTGCAGAGTACCAGGTGTTGGTGGAAGGAGTGCCCAG TCCCAGGGTGACACTGGACAAGAAAGAGGCCATCCAAGGTGGGATCGTGAGGGTCAACTG TTCTGTCCCAGAGGAAAAGGCCCCAATACACTTCACAATTGAAAAACTTGAACTAAATGA AAAAATGGTCAAGCTGAAAAGAGAGAAGAATTCTCGAGACCAGAATTTTGTGATACTGGA ATTCCCCGTTGAGGAACAGGACCGCGTTTTATCCTTCCGATGTCAAGCTAGGATCATTTC TGGGATCCATATGCAGACCTCAGAATCTACCAAGAGTGAACTGGTCACCGTGACGGAATC CTTCTCTACACCCAAGTTCCACATCAGCCCCACCGGAATGATCATGGAAGGAGCTCAGCT CCACATTAAGTGCACCATTCAAGTGACTCACCTGGCCCAGGAGTTTCCAGAAATCATAAT TCAGAAGGACAAGGCGATTGTGGCCCACAACAGACATGGCAACAAGGCTGTGTACTCAGT CATGGCCATGGTGGAGCACAGTGGCAACTACACGTGCAAAGTGGAGTCCAGCCGCATATC CAAGGTCAGCAGCATCGTGGTCAACATAACAGAACTATTTTCCAAGCCCGAACTGGAATC TTCCTTCACACATCTGGACCAAGGTGAAAGACTGAACCTGTCCTGCTCCATCCCAGGAGC ACCTCCAGCCAACTTCACCATCCAGAAGGAAGATACGATTGTGTCACAGACTCAAGATTT CACCAAGATAGCCTCAAAGTCGGACAGTGGGACGTATATCTGCACTGCAGGTATTGACAA AGTGGTCAAGAAAAGCAACACAGTCCAGATAGTCGTATGTGAAATGCTCTCCCAGCCCAG GATTTCTTATGATGCCCAGTTTGAGGTCATAAAAGGACAGACCATCGAAGTCCGTTGCGA ATCGATCAGTGGAACTTTGCCTATTTCTTACCAACTTTTAAAAACAAGTAAAGTTTTGGA GAATAGTACCAAGAACTCAAATGATCCTGCGGTATTCAAAGACAACCCCACTGAAGACGT CGAATACCAGTGTGTTGCAGATAATTGCCATTCCCACGCCAAAATGTTAAGTGAGGTTCT GAGGGTGAAGGTGATAGCCCCGGTGGATGAGGTCCAGATTTCTATCCTGTCAAGTAAGGT GGTGGAGTCTGGAGAGGACATTGTGCTGCAATGTGCTGTGAATGAAGGATCTGGTCCCAT CACCTATAAGTTTTACAGAGAAAAAGAGGGCAAACCCTTCTATCAAATGACCTCAAATGC CACCCAGGCATTTTGGACCAAGCAGAAGGCTAACAAGGAACAGGAGGGAGAGTATTACTG CACAGCCTTCAACAGAGCCAACCACGCCTCCAGTGTCCCCAGAAGCAAAATACTGACAGT CAGAGTCATTCTTGCCCCATGGAAGAAAGGACTTATTGCAGTGGTTATCATCGGAGTGAT CATTGCTCTCTTGATCATTGCGGCCAAATGTTATTTTCTGAGGAAAGCCAAGGCCAAGCA GATGCCAGTGGAAATGTCCAGGCCAGCAGTACCACTTCTGAACTCCAACAACGAGAAAAT GTCAGATCCCAATATGGAAGCTAACAGTCATTACGGTCACAATGACGATGTCGGAAACCA TGCAATGAAACCAATAAATGATAATAAAGAGCCTCTGAACTCAGACGTGCAGTACACGGA AGTTCAAGTGTCCTCAGCTGAGTCTCACAAAGATCTAGGAAAGAAGGACACAGAGACAGT GTACAGTGAAGTCCGGAAAGCTGTCCCTGATGCCGTGGAAAGCAGATACTCTAGAACGGA AGGCTCCCTTGATGGAACTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGA GTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGT TGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCA GACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAA TGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAAT AAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGG GAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATC CTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGT CAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACT TTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATG TATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT GTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCA CGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC GAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCC CGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTG GTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTA TGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATC GGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTT GATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATG CCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGC TCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCT CGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTAC ACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCC TCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAG CTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACA TGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTT TCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGC GAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCT CTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCG TGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCA AGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACT ATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTA ACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTA ACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCT TCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTT TTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGA TCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCA TGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGC ACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATT AAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTT ATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGC CGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCAC TTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCG GCGTAGAGGATCGAGATCT |