OR1L6 ORF clone pFN21AE0893

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Halotag ORF Clone pFN21AE0893

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Clone info.

Species

human

Clone Name

pFN21AE0893 Sequence (with vector) Restriction Map

Product ID

FHC11345

Flexi Clone PID

FXC11345

ORF Sequence

DNA sequence (1041 bp)
Protein sequence (347 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529307]

Gene

KIEE0893

Symbol

OR1L6

Alias : HG16, OR1K1, OR1L7, OR9-30

Description

olfactory receptor, family 1, subfamily L, member 6

Original Clone ID

cp01293

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1041 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 347 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35130.2 1.1e-92 98.1 OR1L6 CCDS35129.1 4.5e-89 94.8 OR1L4 CCDS35127.2 3.9e-63 68.0 OR1L1 CCDS35128.1 5.1e-60 66.9 OR1L3 CCDS35124.1 2.9e-55 60.7 OR1L8 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 63 87 PR00237 GPCR IPR000276 96 117 PR00237 GPCR IPR000725 129 140 PR00245 Olfactory receptor IPR000276 141 163 PR00237 GPCR IPR000725 166 178 PR00245 Olfactory receptor IPR000725 213 229 PR00245 Olfactory receptor IPR000276 236 259 PR00237 GPCR IPR000725 273 282 PR00245 Olfactory receptor IPR000276 309 335 PR00237 GPCR IPR000725 320 331 PR00245 Olfactory receptor HMMPfam IPR000276 78 327 PF00001 GPCR ProfileScan IPR017452 78 327 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 8 KLMKEAVLVKLPFTSLPLLLQTL 30 SECONDARY 23 2 55 SSNPKLQKPLFAIFLIMYLLAAV 77 SECONDARY 23 3 98 FFLSNLSFMDICFTTVIVPKMLV 120 SECONDARY 23 4 125 ETKVISYVGCLAQMYFFMAFGN 146 SECONDARY 22 5 148 DSYLLASMAIDRLVAICNPLHY 169 SECONDARY 22 6 171 VVMKPRHCLLMLLGSYSISHLHS 193 SECONDARY 23 7 195 FRVLLMSRLSFCASHIIKHFFCD 217 SECONDARY 23 8 239 ETLAVIVTPFLCTIFSYLQIIVT 261 PRIMARY 23 9 278 CGSHLTAVALFYGSIIYVYFRPL 300 PRIMARY 23 10 309 RVATVMYTVVTPMLNPFIYSLR 330 SECONDARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011520808 322 603232 55.0 89.6 NP_036492 312 603232 55.6 87.0 XP_011520809 312 603232 55.6 87.0 NP_002539 312 164342 52.3 87.6 NP_001005191 312 611538 51.9 88.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0893 Download

>KIEE0893  1041 bp
ATGAGCTATTTTTACAGGCTTAAGCTTATGAAAGAAGCTGTCTTGGTCAAACTGCCCTTT
ACATCTCTCCCACTGCTTCTCCAAACCCTATCCAGGAAGTCCAGAGACATGGAGATAAAG
AACTACAGCAGCAGCACCTCAGGCTTCATCCTCCTGGGCCTCTCTTCCAACCCTAAGCTG
CAGAAACCTCTCTTTGCCATCTTCCTCATCATGTACCTGCTCGCTGCGGTGGGGAATGTG
CTCATCATCCCGGCCATCTACTCTGACCCCAGGCTCCACACCCCTATGTACTTTTTTCTC
AGCAACTTGTCTTTCATGGATATCTGCTTCACAACAGTCATAGTGCCTAAGATGCTGGTG
AATTTTCTATCAGAGACAAAGGTTATCTCCTATGTGGGCTGCCTGGCCCAGATGTACTTC
TTTATGGCATTTGGGAACACTGACAGCTACCTGCTGGCCTCTATGGCCATCGACCGGCTG
GTGGCCATCTGCAACCCCTTACACTATGATGTGGTTATGAAACCACGGCATTGCCTGCTC
ATGCTATTGGGTTCTTACAGCATCTCCCACCTACATTCCCTGTTCCGCGTGCTACTTATG
TCTCGCTTGTCTTTCTGTGCCTCTCACATCATTAAGCACTTTTTCTGTGACACCCAGCCT
GTGCTAAAGCTCTCCTGCTCTGACACATCCTCCAGCCAGATGGTGGTGATGACTGAGACC
TTAGCTGTCATTGTGACCCCCTTCCTGTGTACCATCTTCTCCTACCTGCAAATCATCGTC
ACTGTGCTCAGAATCCCCTCTGCAGCCAGGAAGTGGAAGGCCTTCTCTACCTGTGGCTCC
CACCTCACTGCAGTAGCCCTTTTCTATGGGAGTATTATTTATGTCTATTTTAGGCCCCTG
TCCATGTACTCAGTGGTTAGGGACCGGGTAGCCACAGTTATGTACACAGTAGTGACACCC
ATGCTGAACCCTTTCATCTACAGCCTGAGGAACAAAGATATGAAGAGGGGTTTGAAGAAA
TTACAGGACAGAATTTACCGG

ORF Protein

Cloned ORF protein sequence for pFN21AE0893 Download

>KIEE0893  347 aa
MSYFYRLKLMKEAVLVKLPFTSLPLLLQTLSRKSRDMEIKNYSSSTSGFILLGLSSNPKL
QKPLFAIFLIMYLLAAVGNVLIIPAIYSDPRLHTPMYFFLSNLSFMDICFTTVIVPKMLV
NFLSETKVISYVGCLAQMYFFMAFGNTDSYLLASMAIDRLVAICNPLHYDVVMKPRHCLL
MLLGSYSISHLHSLFRVLLMSRLSFCASHIIKHFFCDTQPVLKLSCSDTSSSQMVVMTET
LAVIVTPFLCTIFSYLQIIVTVLRIPSAARKWKAFSTCGSHLTAVALFYGSIIYVYFRPL
SMYSVVRDRVATVMYTVVTPMLNPFIYSLRNKDMKRGLKKLQDRIYR

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0893 Download

>pFN21AE0893  5746 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAGCTATTTTTACAGGCTTAAGCTTATGAAAGA
AGCTGTCTTGGTCAAACTGCCCTTTACATCTCTCCCACTGCTTCTCCAAACCCTATCCAG
GAAGTCCAGAGACATGGAGATAAAGAACTACAGCAGCAGCACCTCAGGCTTCATCCTCCT
GGGCCTCTCTTCCAACCCTAAGCTGCAGAAACCTCTCTTTGCCATCTTCCTCATCATGTA
CCTGCTCGCTGCGGTGGGGAATGTGCTCATCATCCCGGCCATCTACTCTGACCCCAGGCT
CCACACCCCTATGTACTTTTTTCTCAGCAACTTGTCTTTCATGGATATCTGCTTCACAAC
AGTCATAGTGCCTAAGATGCTGGTGAATTTTCTATCAGAGACAAAGGTTATCTCCTATGT
GGGCTGCCTGGCCCAGATGTACTTCTTTATGGCATTTGGGAACACTGACAGCTACCTGCT
GGCCTCTATGGCCATCGACCGGCTGGTGGCCATCTGCAACCCCTTACACTATGATGTGGT
TATGAAACCACGGCATTGCCTGCTCATGCTATTGGGTTCTTACAGCATCTCCCACCTACA
TTCCCTGTTCCGCGTGCTACTTATGTCTCGCTTGTCTTTCTGTGCCTCTCACATCATTAA
GCACTTTTTCTGTGACACCCAGCCTGTGCTAAAGCTCTCCTGCTCTGACACATCCTCCAG
CCAGATGGTGGTGATGACTGAGACCTTAGCTGTCATTGTGACCCCCTTCCTGTGTACCAT
CTTCTCCTACCTGCAAATCATCGTCACTGTGCTCAGAATCCCCTCTGCAGCCAGGAAGTG
GAAGGCCTTCTCTACCTGTGGCTCCCACCTCACTGCAGTAGCCCTTTTCTATGGGAGTAT
TATTTATGTCTATTTTAGGCCCCTGTCCATGTACTCAGTGGTTAGGGACCGGGTAGCCAC
AGTTATGTACACAGTAGTGACACCCATGCTGAACCCTTTCATCTACAGCCTGAGGAACAA
AGATATGAAGAGGGGTTTGAAGAAATTACAGGACAGAATTTACCGGGTTTAAACGAATTC
GGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTG
CTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCAT
AACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAA
ACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCT
TTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTT
ATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAA
TGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATA
GCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTA
ATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATG
CTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATT
CCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTA
AAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGC
GGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAA
GTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGC
CGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTT
ACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACT
GCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCAC
AACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATA
CCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTA
TTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCG
GATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGAT
AAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGT
AAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGA
AATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACC
GACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAG
AATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACC
GTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACA
AAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGT
TTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACC
TGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATC
TCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGC
CCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACT
TATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTG
CTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTA
TCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCA
AACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAA
AAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACG
AAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCC
TTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAAC
CATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTT
GCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGT
TTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGT
ACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAAC
CGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT