VN1R4 ORF clone pFN21AE0844

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Halotag ORF Clone pFN21AE0844

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Clone info.

Species

human

Clone Name

pFN21AE0844 Sequence (with vector) Restriction Map

Product ID

FHC11305

Flexi Clone PID

FXC11305

ORF Sequence

DNA sequence (903 bp)
Protein sequence (301 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529267]

Gene

KIEE0844

Symbol

VN1R4

Alias : V1RL4

Description

vomeronasal 1 receptor 4

Original Clone ID

cp01244

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 903 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 301 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33099.1 6.6e-133 100.0 VN1R4 CCDS12862.1 1.4e-71 57.1 VN1R2 CCDS12951.1 5.9e-50 43.1 VN1R1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR004072 36 46 PR01534 Vomeronasal receptor IPR004072 75 89 PR01534 Vomeronasal receptor IPR004072 110 127 PR01534 Vomeronasal receptor IPR004072 207 221 PR01534 Vomeronasal receptor IPR004072 221 234 PR01534 Vomeronasal receptor IPR004072 281 292 PR01534 Vomeronasal receptor HMMPfam IPR004072 37 289 PF03402 Vomeronasal receptor ProfileScan IPR017452 21 285 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 6 VAVGMILSQTVVGVLGSFSVLLH 28 PRIMARY 23 2 60 KGVPQTMAAFGVRYFLNALGCKL 82 SECONDARY 23 3 90 GRGVSIGTTCLLSVFQVITVSS 111 SECONDARY 22 4 127 VGFSVLLCWIVCMLVNIIFPMYV 149 PRIMARY 23 5 181 AMLLSFPDVLCLGLMLWVSSSMV 203 SECONDARY 23 6 235 ILILVSTFVSSYTLSCLFQVCMA 257 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_065684 353 605234 43.1 99.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0844 Download

>KIEE0844  903 bp
ATGGCCTCCCGGTATGTGGCAGTGGGAATGATCTTATCACAGACCGTGGTGGGAGTCCTG
GGGAGCTTCTCTGTTCTTCTCCATTATCTCTCCTTTTACTGCACTGGGTGCAGGTTAAGG
TCCACAGATTTGATTGTTAAGCACCTGATTGTAGCCAACTTCTTAGCTCTCCGCTGTAAA
GGAGTCCCCCAGACAATGGCAGCTTTTGGGGTTAGATATTTTCTCAATGCTCTTGGGTGC
AAACTTGTTTTCTATCTCCATAGAGTGGGCAGGGGAGTGTCCATTGGCACCACCTGCCTC
TTGAGTGTCTTCCAGGTGATCACGGTCAGCTCCAGGAAATCCAGGTGGGCAAAACTTAAA
GAGAAAGCCCCCAAGCATGTTGGCTTTTCTGTTCTCCTGTGCTGGATCGTGTGCATGTTG
GTAAACATCATCTTTCCCATGTATGTGACTGGCAAATGGAACTACACAAACATCACAGTG
AACGAGGATTTGGGATACTGTTCTGGGGGAGGCAACAACAAAATCGCACAGACACTGCGT
GCAATGTTGTTATCATTCCCTGATGTGTTGTGTCTGGGGCTCATGCTCTGGGTCAGCAGC
TCCATGGTTTGCATACTGCACAGGCACAAGCAGCGGGTCCAGCACATTGATAGGAGCAAT
CTCTCCCCCAGAGCCTCCCCAGAGAACAGAGCTACGCAGAGCATCCTCATCCTGGTGAGC
ACCTTTGTGTCTTCTTACACTCTCTCCTGCCTTTTCCAAGTTTGTATGGCTCTTTTGGAT
AATCCCAATAGTTTACTGGTGAACACTTCAGCCTTAATGAGTGTATGTTTCCCAACTCTC
AGCCCCTTTGTTCTCATGAGCTGTGACCCCAGTGTATACAGGTTTTGTTTTGCCTGGAAA
AGA

ORF Protein

Cloned ORF protein sequence for pFN21AE0844 Download

>KIEE0844  301 aa
MASRYVAVGMILSQTVVGVLGSFSVLLHYLSFYCTGCRLRSTDLIVKHLIVANFLALRCK
GVPQTMAAFGVRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSVFQVITVSSRKSRWAKLK
EKAPKHVGFSVLLCWIVCMLVNIIFPMYVTGKWNYTNITVNEDLGYCSGGGNNKIAQTLR
AMLLSFPDVLCLGLMLWVSSSMVCILHRHKQRVQHIDRSNLSPRASPENRATQSILILVS
TFVSSYTLSCLFQVCMALLDNPNSLLVNTSALMSVCFPTLSPFVLMSCDPSVYRFCFAWK
R

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0844 Download

>pFN21AE0844  5608 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCTCCCGGTATGTGGCAGTGGGAATGATCTT
ATCACAGACCGTGGTGGGAGTCCTGGGGAGCTTCTCTGTTCTTCTCCATTATCTCTCCTT
TTACTGCACTGGGTGCAGGTTAAGGTCCACAGATTTGATTGTTAAGCACCTGATTGTAGC
CAACTTCTTAGCTCTCCGCTGTAAAGGAGTCCCCCAGACAATGGCAGCTTTTGGGGTTAG
ATATTTTCTCAATGCTCTTGGGTGCAAACTTGTTTTCTATCTCCATAGAGTGGGCAGGGG
AGTGTCCATTGGCACCACCTGCCTCTTGAGTGTCTTCCAGGTGATCACGGTCAGCTCCAG
GAAATCCAGGTGGGCAAAACTTAAAGAGAAAGCCCCCAAGCATGTTGGCTTTTCTGTTCT
CCTGTGCTGGATCGTGTGCATGTTGGTAAACATCATCTTTCCCATGTATGTGACTGGCAA
ATGGAACTACACAAACATCACAGTGAACGAGGATTTGGGATACTGTTCTGGGGGAGGCAA
CAACAAAATCGCACAGACACTGCGTGCAATGTTGTTATCATTCCCTGATGTGTTGTGTCT
GGGGCTCATGCTCTGGGTCAGCAGCTCCATGGTTTGCATACTGCACAGGCACAAGCAGCG
GGTCCAGCACATTGATAGGAGCAATCTCTCCCCCAGAGCCTCCCCAGAGAACAGAGCTAC
GCAGAGCATCCTCATCCTGGTGAGCACCTTTGTGTCTTCTTACACTCTCTCCTGCCTTTT
CCAAGTTTGTATGGCTCTTTTGGATAATCCCAATAGTTTACTGGTGAACACTTCAGCCTT
AATGAGTGTATGTTTCCCAACTCTCAGCCCCTTTGTTCTCATGAGCTGTGACCCCAGTGT
ATACAGGTTTTGTTTTGCCTGGAAAAGAGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT