OR5J1P ORF clone pFN21AE0814

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Halotag ORF Clone pFN21AE0814

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Clone info.

Species

human

Clone Name

pFN21AE0814 Sequence (with vector) Restriction Map

Product ID

FHC11286

Flexi Clone PID

FXC11286

ORF Sequence

DNA sequence (768 bp)
Protein sequence (256 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529248]

Gene

KIEE0814

Symbol

OR5J1P

Alias : HTPCRH02, OR11-169, OR5J1

Description

olfactory receptor, family 5, subfamily J, member 1 pseudogene

Original Clone ID

cp01214

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 768 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 256 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31522.1 5.4e-43 68.0 OR5J2 CCDS7949.1 2.8e-34 52.0 OR5I1 CCDS31706.1 3.4e-34 52.9 OR8D1 CCDS31709.1 3.5e-31 48.0 OR8B3 CCDS31551.1 7.5e-31 49.8 OR5B12 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 53 77 PR00237 GPCR IPR000725 119 130 PR00245 Olfactory receptor IPR000276 131 153 PR00237 GPCR IPR000725 156 168 PR00245 Olfactory receptor IPR000725 203 219 PR00245 Olfactory receptor HMMPfam IPR000276 68 254 PF00001 GPCR ProfileScan IPR017452 68 256 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MVLILRYHYSELIPISISLTG 21 SECONDARY 21 2 57 LFLLIYTISLVGNIGMLFLIYVT 79 PRIMARY 23 3 89 FLSCLSFVDACYSSVFAPRMLLN 111 SECONDARY 23 4 122 SACIVQYFLFVSLLTTEGFLLAT 144 PRIMARY 23 5 156 PLLYTVAMTKIVCIVLAFGSCMG 178 PRIMARY 23 6 224 LLLLIFSGIIATLTFLTVVISYI 246 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006628 314 608496 52.0 88.7 NP_003688 314 608492 46.1 89.1 NP_001004729 311 615702 45.1 87.5 XP_011520808 322 603232 41.6 89.8 XP_011520809 312 603232 41.9 89.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0814 Download

>KIEE0814  768 bp
ATGGTCTTGATATTGCGGTATCATTACTCTGAATTAATTCCAATCTCCATATCATTAACA
GGCATCAAGAAACACAAATCCATGGCTGATGTTAATTTTACATTGGTTACTGAGTTTATC
CTTTTGGAACTGACAGATCGTGCTGAACTGAAGATGGTCCTCTTCGTGTTGTTCCTGCTG
ATCTACACCATTTCCCTGGTGGGAAATATAGGAATGCTCTTTCTAATCTATGTAACTCCC
AAACTCCACACACCCATGTATTATTTCCTCAGCTGTCTGTCATTTGTTGATGCCTGCTAT
TCATCAGTTTTTGCACCCAGAATGCTGCTGAACTTCTTTGTTGAGCGGGAGACAATCTTA
TTCTCTGCATGTATTGTGCAGTATTTTTTATTCGTGTCTCTCCTTACCACTGAGGGCTTC
TTGCTGGCCACAATGGCTTACGACCGTTACATGGCCATTGTGAACCCTTTACTTTATACA
GTAGCTATGACTAAAATAGTTTGTATTGTGCTCGCATTTGGGTCATGTATGGGAGGTTTA
ATCAACTCATTGACACATACAATTGGCTTGGTGAAACTGTCTTTCTGTGGGCCAAATGTC
ATCAGTCACTTCTTCTGTGATCTTCCCCCACTGTTGAAGCTGTCATGTTCTGAGACATCT
ATGAATGAATTGTTGCTTTTGATCTTCTCTGGCATTATTGCCACGCTCACTTTTTTGACT
GTGGTGATCTCCTACATCTTCATTGTTGCTGCTATCCTGAGGATCCGC

ORF Protein

Cloned ORF protein sequence for pFN21AE0814 Download

>KIEE0814  256 aa
MVLILRYHYSELIPISISLTGIKKHKSMADVNFTLVTEFILLELTDRAELKMVLFVLFLL
IYTISLVGNIGMLFLIYVTPKLHTPMYYFLSCLSFVDACYSSVFAPRMLLNFFVERETIL
FSACIVQYFLFVSLLTTEGFLLATMAYDRYMAIVNPLLYTVAMTKIVCIVLAFGSCMGGL
INSLTHTIGLVKLSFCGPNVISHFFCDLPPLLKLSCSETSMNELLLLIFSGIIATLTFLT
VVISYIFIVAAILRIR

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0814 Download

>pFN21AE0814  5473 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGTCTTGATATTGCGGTATCATTACTCTGAATT
AATTCCAATCTCCATATCATTAACAGGCATCAAGAAACACAAATCCATGGCTGATGTTAA
TTTTACATTGGTTACTGAGTTTATCCTTTTGGAACTGACAGATCGTGCTGAACTGAAGAT
GGTCCTCTTCGTGTTGTTCCTGCTGATCTACACCATTTCCCTGGTGGGAAATATAGGAAT
GCTCTTTCTAATCTATGTAACTCCCAAACTCCACACACCCATGTATTATTTCCTCAGCTG
TCTGTCATTTGTTGATGCCTGCTATTCATCAGTTTTTGCACCCAGAATGCTGCTGAACTT
CTTTGTTGAGCGGGAGACAATCTTATTCTCTGCATGTATTGTGCAGTATTTTTTATTCGT
GTCTCTCCTTACCACTGAGGGCTTCTTGCTGGCCACAATGGCTTACGACCGTTACATGGC
CATTGTGAACCCTTTACTTTATACAGTAGCTATGACTAAAATAGTTTGTATTGTGCTCGC
ATTTGGGTCATGTATGGGAGGTTTAATCAACTCATTGACACATACAATTGGCTTGGTGAA
ACTGTCTTTCTGTGGGCCAAATGTCATCAGTCACTTCTTCTGTGATCTTCCCCCACTGTT
GAAGCTGTCATGTTCTGAGACATCTATGAATGAATTGTTGCTTTTGATCTTCTCTGGCAT
TATTGCCACGCTCACTTTTTTGACTGTGGTGATCTCCTACATCTTCATTGTTGCTGCTAT
CCTGAGGATCCGCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGAC
CTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTG
CTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATG
ATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTT
ATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAA
GTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTT
TTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTT
GCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCAC
CGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGG
GGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGT
ATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTT
GCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTG
GGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAA
CGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATT
GACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAG
TACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGT
GCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGA
CCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGT
TGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTA
GCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGG
CAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCC
CTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGT
ATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACG
GGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTG
ATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACT
CAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAG
CAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATA
GGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACC
CGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTG
TTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGC
TTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGG
GCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTC
TTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGA
TTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACG
GCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAA
AAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTG
TTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTT
CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGAT
TATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTG
GATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGG
GGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGG
CGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGAT
CGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTG
TCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAG
AGGATCGAGATCT