PNMAL1 ORF clone pFN21AE0471

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Halotag ORF Clone pFN21AE0471

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Clone info.

Species

human

Clone Name

pFN21AE0471 Sequence (with vector) Restriction Map

Product ID

FHC05204

Flexi Clone PID

FXC05204

ORF Sequence

DNA sequence (1317 bp)
Protein sequence (439 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528135]

Gene

KIEE0471

Symbol

PNMAL1

Description

paraneoplastic Ma antigen family-like 1, transcript variant 1

Original Clone ID

oc01171

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1317 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 439 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33059.1 6.7e-119 99.8 PNMAL1 CCDS46124.1 1.3e-98 99.7 PNMAL1 CCDS9818.1 4.9e-16 52.3 PNMA1 CCDS9908.1 9.1e-15 38.7 MOAP1 CCDS34868.1 5.4e-14 41.3 PNMA2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition None - - - - -
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 148 EALGVLLGAVVQIIFCMDA 166 PRIMARY 19 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0471 Download

>KIEE0471  1317 bp
ATGTCCAAGACCATGGCGATGAACCTTCTGGAGGATTGGTGCAGGGGAATGGAAGTGGAC
ATCCACAGGTCCTTGTTGGTCACAGGCATCCCAGAGGACTGTGGGCAGGCAGAAATTGAG
GAGACCTTGAATGGGGTCCTCTCCCCACTGGGCCCGTACCGCGCGCTCAACAAGATTTTT
GTGAGGGAAGAGAATGTTAAAGCTGCCCTCATTGAGGTTGGTGAAGGTGTGAATCTGAGC
ACCATCCCCCGTGAATTCCCAGGAAGGGGTGGTGTCTGGAGAGTGGTCTGTAGAGACCCT
ACCCAGGATGCCGAGTTTTTAAAAAATCTGAATGAATTCCTGGATGCCGAGGGGCGCACC
TGGGAGGATGTGGTCCGCCTGCTCCAGCTCAACCACCCCACCCTGTCCCAGAACCAGCAT
CAGCCCCCAGAGAACTGGGCAGAAGCTCTGGGGGTGCTTCTGGGAGCAGTGGTGCAGATC
ATCTTCTGCATGGATGCCGAGATCCGCAGCCGGGAGGAAGCCAGGGCCCAGGAGGCCGCT
GAATTCGAGGAGATGGCAGCCTGGGCTTTAGCAGCAGGGAGGAAGGTGAAGAAAGAACCG
GGGCTTGCAGCAGAGGTGGGTTCTGCCTTAAAGGCAGAGACCCCCAACAACTGGAATGCC
ACGGAAGACCAGCATGAGCCTACCAAACCTTTGGTTCGCAGGGCTGGAGCTAAGTCTCGC
TCCAGGAGAAAGAAGCAGAAGAAGAACTCCAGGCAGGAAGCAGTGCCCTGGAAAAAACCC
AAAGGCATCAATTCCAACAGCACAGCTAACTTGGAGGATCCTGAGGTGGGTGATGCTGAA
AGCATGGCGATCTCAGAGCCGATCAAGGGCAGCAGAAAGCCCTGTGTGAATAAGGAGGAG
TTGGCTTTGAAGAAGCCCATGGCGAAATGTGCCTGGAAGGGTCCCAGAGAGCCACCTCAG
GATGCCCGGGCAGAAGCCGAGAGCCCAGGAGGCGCCTCTGAGTCAGACCAAGATGGTGGC
CATGAAAGCCCACCAAAGAAGAAGGCCGTGGCCTGGGTGTCTGCCAAGAACCCCGCTCCC
ATGAGGAAGAAGAAGAAGGTGAGCTTGGGCCCTGTCTCCTACGTCTTGGTTGACTCAGAA
GATGGCAGGAAGAAGCCGGTGATGCCAAAGAAAGGGCCAGGCTCAAGAAGGGAGGCATCA
GATCAGAAGGCCCCTCGGGGCCAGCAGCCTGCCGAGGCAACAGCCTCAACCTCTAGGGGT
CCGAAGGCCAAGCCAGAAGGCTCTCCTCGGCGTGCCACCAATGAATCCAGAAAGGTT

ORF Protein

Cloned ORF protein sequence for pFN21AE0471 Download

>KIEE0471  439 aa
MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
WEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAA
EFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKSR
SRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEVGDAESMAISEPIKGSRKPCVNKEE
LALKKPMAKCAWKGPREPPQDARAEAESPGGASESDQDGGHESPPKKKAVAWVSAKNPAP
MRKKKKVSLGPVSYVLVDSEDGRKKPVMPKKGPGSRREASDQKAPRGQQPAEATASTSRG
PKAKPEGSPRRATNESRKV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0471 Download

>pFN21AE0471  6022 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCCAAGACCATGGCGATGAACCTTCTGGAGGA
TTGGTGCAGGGGAATGGAAGTGGACATCCACAGGTCCTTGTTGGTCACAGGCATCCCAGA
GGACTGTGGGCAGGCAGAAATTGAGGAGACCTTGAATGGGGTCCTCTCCCCACTGGGCCC
GTACCGCGCGCTCAACAAGATTTTTGTGAGGGAAGAGAATGTTAAAGCTGCCCTCATTGA
GGTTGGTGAAGGTGTGAATCTGAGCACCATCCCCCGTGAATTCCCAGGAAGGGGTGGTGT
CTGGAGAGTGGTCTGTAGAGACCCTACCCAGGATGCCGAGTTTTTAAAAAATCTGAATGA
ATTCCTGGATGCCGAGGGGCGCACCTGGGAGGATGTGGTCCGCCTGCTCCAGCTCAACCA
CCCCACCCTGTCCCAGAACCAGCATCAGCCCCCAGAGAACTGGGCAGAAGCTCTGGGGGT
GCTTCTGGGAGCAGTGGTGCAGATCATCTTCTGCATGGATGCCGAGATCCGCAGCCGGGA
GGAAGCCAGGGCCCAGGAGGCCGCTGAATTCGAGGAGATGGCAGCCTGGGCTTTAGCAGC
AGGGAGGAAGGTGAAGAAAGAACCGGGGCTTGCAGCAGAGGTGGGTTCTGCCTTAAAGGC
AGAGACCCCCAACAACTGGAATGCCACGGAAGACCAGCATGAGCCTACCAAACCTTTGGT
TCGCAGGGCTGGAGCTAAGTCTCGCTCCAGGAGAAAGAAGCAGAAGAAGAACTCCAGGCA
GGAAGCAGTGCCCTGGAAAAAACCCAAAGGCATCAATTCCAACAGCACAGCTAACTTGGA
GGATCCTGAGGTGGGTGATGCTGAAAGCATGGCGATCTCAGAGCCGATCAAGGGCAGCAG
AAAGCCCTGTGTGAATAAGGAGGAGTTGGCTTTGAAGAAGCCCATGGCGAAATGTGCCTG
GAAGGGTCCCAGAGAGCCACCTCAGGATGCCCGGGCAGAAGCCGAGAGCCCAGGAGGCGC
CTCTGAGTCAGACCAAGATGGTGGCCATGAAAGCCCACCAAAGAAGAAGGCCGTGGCCTG
GGTGTCTGCCAAGAACCCCGCTCCCATGAGGAAGAAGAAGAAGGTGAGCTTGGGCCCTGT
CTCCTACGTCTTGGTTGACTCAGAAGATGGCAGGAAGAAGCCGGTGATGCCAAAGAAAGG
GCCAGGCTCAAGAAGGGAGGCATCAGATCAGAAGGCCCCTCGGGGCCAGCAGCCTGCCGA
GGCAACAGCCTCAACCTCTAGGGGTCCGAAGGCCAAGCCAGAAGGCTCTCCTCGGCGTGC
CACCAATGAATCCAGAAAGGTTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCT
AGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTG
AGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGA
GCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAA
AAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGC
AATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATG
TGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGG
ATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGG
GGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGC
ACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAAT
ATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAG
AGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTT
CCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGT
GCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGC
CCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTA
TCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGAC
TTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAA
TTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACT
ATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGC
CTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACG
ATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTA
GCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTG
CGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGG
TCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATC
TACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGT
GCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTAT
CAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGA
ACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGT
TTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGT
GGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGC
GCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAA
GCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCT
CCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTA
ACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTG
GTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGC
CTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTA
CCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTG
GTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTT
TGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGG
TCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAA
CGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGG
ATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAA
TTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGC
TGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATC
CACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGT
CCGGCGTAGAGGATCGAGATCT