EFS ORF clone pFN21AB9981

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB9981

How to Order Order Information

Clone info.

Species

human

Clone Name

pFN21AB9981 Sequence (with vector) Restriction Map

Product ID

FHC03698

Flexi Clone PID

FXC03698

ORF Sequence

DNA sequence (1683 bp)
Protein sequence (561 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527771]

Gene

KIBB9981

Symbol

EFS

Alias : CAS3, CASS3, EFS1, EFS2, HEFS, SIN

Description

embryonal Fyn-associated substrate, transcript variant 1

Original Clone ID

cs01681

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1683 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 561 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9595.1 1.3e-89 100.0 EFS CCDS9596.1 4e-73 100.0 EFS CCDS61404.1 7.8e-46 83.5 EFS The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001452 8 18 PR00452 Src homology-3 domain IPR001452 22 37 PR00452 Src homology-3 domain IPR001452 54 66 PR00452 Src homology-3 domain HMMPfam IPR001452 11 60 PF00018 Src homology-3 domain IPR021901 365 556 PF12026 CAS family HMMSmart IPR001452 8 67 SM00326 Src homology-3 domain ProfileScan IPR001452 5 68 PS50002 Src homology-3 domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_005855 561 609906 100.0 100.0 NP_115835 468 609906 100.0 82.4 XP_005267313 531 609906 94.7 100.0 NP_001264103 392 609906 83.5 82.4 NP_001164192 660 602941 30.5 89.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9981 Download

>KIBB9981  1683 bp
ATGGCCATTGCCACGTCGACCCAGCTGGCCCGGGCACTGTATGACAACACCGCTGAGTCC
CCCCAGGAGCTGTCCTTCCGCCGAGGGGATGTCCTACGGGTCCTGCAGAGAGAGGGCGCT
GGTGGACTGGACGGCTGGTGCCTCTGCTCCCTACACGGCCAGCAGGGCATTGTGCCCGCC
AACAGGGTGAAGCTCTTGCCTGCTGGCCCAGCACCCAAGCCCAGCCTCTCTCCTGCGTCC
CCAGCCCAGCCTGGCTCACCATATCCAGCCCCAGATCACAGCAATGAGGACCAGGAGGTG
TATGTGGTGCCGCCCCCAGCTCGGCCCTGTCCAACCTCAGGACCTCCAGCTGGACCTTGC
CCACCCTCTCCTGACCTCATCTACAAAATCCCCAGAGCTAGTGGGACCCAGCTGGCTGCT
CCCAGAGATGCCTTGGAGGTCTACGATGTGCCCCCCACCGCCCTCCGGGTGCCCTCCAGT
GGCCCCTATGACTGCCCTGCCTCCTTTTCCCACCCTCTGACCCGGGTTGCCCCGCAGCCC
CCTGGAGAGGATGATGCTCCCTATGATGTGCCTCTGACCCCAAAGCCACCTGCAGAGCTG
GAACCAGATCTGGAGTGGGAAGGAGGCCGGGAGCCGGGGCCCCCCATCTATGCTGCCCCC
TCCAACCTGAAACGAGCGTCAGCCTTACTCAATTTGTATGAAGCACCCGAGGAACTGCTG
GCAGACGGGGAGGGCGGGGGCACTGATGAGGGGATCTACGATGTGCCTCTGCTGGGGCCA
GAGGCTCCCCCTTCTCCAGAGCCCCCTGGAGCCTTGGCCTCCCATGACCAGGACACCCTG
GCCCAGCTTCTGGCCAGAAGCCCCCCACCCCCACACAGGCCCCGGCTCCCCTCAGCTGAG
AGCCTGTCCCGCCGCCCTCTGCCTGCCCTGCCTGTCCCTGAGGCCCCCAGCCCCTCCCCA
GTGCCCTCTCCTGCCCCAGGCCGGAAGGGCAGCATCCAGGACCGGCCTCTGCCCCCACCC
CCACCCCGCCTGCCTGGTTATGGAGGCCCCAAGGTCGAGGGGGATCCAGAGGGCAGGGAG
ATGGAGGATGACCCAGCAGGACACCACAATGAGTACGAGGGCATTCCGATGGCCGAGGAG
TATGACTATGTCCACCTGAAGGGCATGGACAAAGCTCAGGGATCTAGGCCCCCGGATCAG
GCCTGCACAGGGGATCCTGAACTGCCCGAGAGGGGGATGCCGGCGCCGCAGGAGGCCCTG
TCCCCAGGGGAGCCACTGGTTGTGTCCACCGGAGATCTGCAGCTCCTGTACTTCTATGCT
GGGCAATGCCAGAGCCACTACTCAGCCCTGCAGGCAGCCGTGGCAGCCCTGATGTCCAGT
ACCCAGGCTAATCAGCCCCCGCGCCTTTTCGTGCCCCACAGCAAGAGGGTGGTGGTGGCT
GCTCATCGCCTGGTGTTTGTTGGGGACACCCTGGGCCGGCTGGCAGCCTCTGCCCCTCTG
AGAGCACAGGTCAGGGCTGCAGGTACAGCACTGGGCCAGGCATTGCGGGCCACTGTGCTG
GCTGTCAAGGGAGCTGCCCTGGGCTACCCATCCAGCCCTGCCATCCAAGAGATGGTGCAG
TGTGTAACAGAACTGGCAGGGCAGGCCCTGCAATTCACTACCCTGCTCACTAGCCTGGCT
CCA

ORF Protein

Cloned ORF protein sequence for pFN21AB9981 Download

>KIBB9981  561 aa
MAIATSTQLARALYDNTAESPQELSFRRGDVLRVLQREGAGGLDGWCLCSLHGQQGIVPA
NRVKLLPAGPAPKPSLSPASPAQPGSPYPAPDHSNEDQEVYVVPPPARPCPTSGPPAGPC
PPSPDLIYKIPRASGTQLAAPRDALEVYDVPPTALRVPSSGPYDCPASFSHPLTRVAPQP
PGEDDAPYDVPLTPKPPAELEPDLEWEGGREPGPPIYAAPSNLKRASALLNLYEAPEELL
ADGEGGGTDEGIYDVPLLGPEAPPSPEPPGALASHDQDTLAQLLARSPPPPHRPRLPSAE
SLSRRPLPALPVPEAPSPSPVPSPAPGRKGSIQDRPLPPPPPRLPGYGGPKVEGDPEGRE
MEDDPAGHHNEYEGIPMAEEYDYVHLKGMDKAQGSRPPDQACTGDPELPERGMPAPQEAL
SPGEPLVVSTGDLQLLYFYAGQCQSHYSALQAAVAALMSSTQANQPPRLFVPHSKRVVVA
AHRLVFVGDTLGRLAASAPLRAQVRAAGTALGQALRATVLAVKGAALGYPSSPAIQEMVQ
CVTELAGQALQFTTLLTSLAP

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9981 Download

>pFN21AB9981  6388 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCATTGCCACGTCGACCCAGCTGGCCCGGGC
ACTGTATGACAACACCGCTGAGTCCCCCCAGGAGCTGTCCTTCCGCCGAGGGGATGTCCT
ACGGGTCCTGCAGAGAGAGGGCGCTGGTGGACTGGACGGCTGGTGCCTCTGCTCCCTACA
CGGCCAGCAGGGCATTGTGCCCGCCAACAGGGTGAAGCTCTTGCCTGCTGGCCCAGCACC
CAAGCCCAGCCTCTCTCCTGCGTCCCCAGCCCAGCCTGGCTCACCATATCCAGCCCCAGA
TCACAGCAATGAGGACCAGGAGGTGTATGTGGTGCCGCCCCCAGCTCGGCCCTGTCCAAC
CTCAGGACCTCCAGCTGGACCTTGCCCACCCTCTCCTGACCTCATCTACAAAATCCCCAG
AGCTAGTGGGACCCAGCTGGCTGCTCCCAGAGATGCCTTGGAGGTCTACGATGTGCCCCC
CACCGCCCTCCGGGTGCCCTCCAGTGGCCCCTATGACTGCCCTGCCTCCTTTTCCCACCC
TCTGACCCGGGTTGCCCCGCAGCCCCCTGGAGAGGATGATGCTCCCTATGATGTGCCTCT
GACCCCAAAGCCACCTGCAGAGCTGGAACCAGATCTGGAGTGGGAAGGAGGCCGGGAGCC
GGGGCCCCCCATCTATGCTGCCCCCTCCAACCTGAAACGAGCGTCAGCCTTACTCAATTT
GTATGAAGCACCCGAGGAACTGCTGGCAGACGGGGAGGGCGGGGGCACTGATGAGGGGAT
CTACGATGTGCCTCTGCTGGGGCCAGAGGCTCCCCCTTCTCCAGAGCCCCCTGGAGCCTT
GGCCTCCCATGACCAGGACACCCTGGCCCAGCTTCTGGCCAGAAGCCCCCCACCCCCACA
CAGGCCCCGGCTCCCCTCAGCTGAGAGCCTGTCCCGCCGCCCTCTGCCTGCCCTGCCTGT
CCCTGAGGCCCCCAGCCCCTCCCCAGTGCCCTCTCCTGCCCCAGGCCGGAAGGGCAGCAT
CCAGGACCGGCCTCTGCCCCCACCCCCACCCCGCCTGCCTGGTTATGGAGGCCCCAAGGT
CGAGGGGGATCCAGAGGGCAGGGAGATGGAGGATGACCCAGCAGGACACCACAATGAGTA
CGAGGGCATTCCGATGGCCGAGGAGTATGACTATGTCCACCTGAAGGGCATGGACAAAGC
TCAGGGATCTAGGCCCCCGGATCAGGCCTGCACAGGGGATCCTGAACTGCCCGAGAGGGG
GATGCCGGCGCCGCAGGAGGCCCTGTCCCCAGGGGAGCCACTGGTTGTGTCCACCGGAGA
TCTGCAGCTCCTGTACTTCTATGCTGGGCAATGCCAGAGCCACTACTCAGCCCTGCAGGC
AGCCGTGGCAGCCCTGATGTCCAGTACCCAGGCTAATCAGCCCCCGCGCCTTTTCGTGCC
CCACAGCAAGAGGGTGGTGGTGGCTGCTCATCGCCTGGTGTTTGTTGGGGACACCCTGGG
CCGGCTGGCAGCCTCTGCCCCTCTGAGAGCACAGGTCAGGGCTGCAGGTACAGCACTGGG
CCAGGCATTGCGGGCCACTGTGCTGGCTGTCAAGGGAGCTGCCCTGGGCTACCCATCCAG
CCCTGCCATCCAAGAGATGGTGCAGTGTGTAACAGAACTGGCAGGGCAGGCCCTGCAATT
CACTACCCTGCTCACTAGCCTGGCTCCAGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT