RBBP5 ORF clone pFN21AB9771

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB9771

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Clone info.

Species

human

Clone Name

pFN21AB9771 Sequence (with vector) Restriction Map

Product ID

FHC10515

Flexi Clone PID

FXC10515

Original Clone PID

ORK10515

ORF Sequence

DNA sequence (1614 bp)
Protein sequence (538 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527310]

Gene

KIBB9771

Symbol

RBBP5

Alias : RBQ3, SWD1

Description

retinoblastoma binding protein 5, transcript variant 1

Original Clone ID

ee22358

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1614 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 538 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS30983.1 3e-137 99.8 RBBP5 CCDS53463.1 3e-125 99.8 RBBP5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR019781 30 52 PF00400 WD40 repeat IPR019781 61 94 PF00400 WD40 repeat HMMSmart IPR001680 14 52 SM00320 WD40 repeat IPR001680 55 94 SM00320 WD40 repeat IPR001680 182 226 SM00320 WD40 repeat IPR001680 241 280 SM00320 WD40 repeat IPR001680 283 322 SM00320 WD40 repeat ProfileScan IPR017986 36 103 PS50294 WD40-repeat-containing domain IPR019782 62 103 PS50082 WD40 repeat 2
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_005048 538 600697 99.8 100.0 XP_011508135 537 600697 99.6 100.0 NP_001180201 500 600697 99.8 91.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9771 Download

>KIBB9771  1614 bp
ATGAACCTCGAGTTGCTGGAGTCCTTTGGGCAGAACTATCCAGAGGAAGCTGATGGAACT
TTGGATTGTATCAGCATGGCTTTGACTTGCACCTTTAACAGGTGGGGCACACTGCTTGCA
GTTGGCTGTAATGATGGCCGAATTGTCATCTGGGATTTCTTGACAAGAGGCATTGCTAAA
ATAATTAGTGCACACATCCATCCAGTGTGTTCTTTATGCTGGAGCCGAGATGGTCATAAA
CTCGTGAGTGCTTCCACTGATAACATAGTGTCACAGTGGGATGTTCTTTCAGGCGACTGT
GACCAGAGGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAATATCATCCACGAGATCAG
AACAAGGTTCTCGTGTGTCCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCC
AAACATGTTTTTCTGCCGGTGGACGATGACTCCGATTTGAACGTTGTGGCATCTTTTGAT
AGGCGAGGGGAATATATTTATACGGGAAACGCAAAAGGCAAGATTTTGGTCCTAAAAACA
GATTCTCAGGATCTTGTTGCTTCCTTCAGAGTGACAACTGGAACAAGCAATACCACAGCC
ATTAAGTCAATTGAGTTTGCCCGGAAGGGGAGTTGCTTTTTAATTAACACGGCAGATCGA
ATAATCAGAGTTTATGATGGCAGAGAAATCTTAACATGTGGAAGAGATGGAGAGCCTGAA
CCTATGCAGAAATTGCAGGATTTGGTGAATAGGACCCCATGGAAGAAATGTTGTTTCTCT
GGGGATGGGGAATACATCGTGGCAGGTTCTGCCCGGCAGCATGCCCTGTACATCTGGGAG
AAGAGCATTGGCAACCTGGTGAAGATTCTCCATGGGACGAGAGGAGAACTCCTCTTGGAT
GTAGCTTGGCATCCTGTTCGACCCATCATAGCATCCATTTCCAGTGGAGTGGTATCTATC
TGGGCACAGAATCAAGTAGAAAACTGGAGTGCATTTGCACCAGACTTCAAAGAATTGGAT
GAAAATGTAGAATACGAAGAAAGGGAATCAGAGTTTGATATTGAAGATGAAGATAAGAGT
GAGCCTGAGCAGACAGGGGCTGATGCTGCAGAAGATGAGGAAGTGGATGTCACCAGCGTG
GACCCTATTGCTGCCTTCTGTAGCAGTGATGAAGAGCTGGAAGATTCAAAGGCTCTATTG
TATTTACCCATTGCCCCTGAGGTAGAAGACCCAGAAGAAAATCCTTACGGCCCCCCACCG
GATGCAGTCCAAACCTCCTTGATGGATGAAGGGGCTAGTTCAGAGAAGAAGAGGCAGTCC
TCAGCAGATGGGTCCCAGCCACCTAAGAAGAAACCCAAAACAACCAATATAGAACTTCAA
GGAGTACCAAATGATGAAGTCCATCCACTACTGGGTGTGAAGGGGGATGGCAAATCCAAG
AAGAAGCAAGCAGGCCGGCCTAAAGGATCAAAAGGTAAAGAGAAAGATTCTCCATTTAAA
CCGAAACTCTACAAAGGGGACAGAGGTTTACCTCTGGAAGGATCAGCGAAGGGTAAAGTG
CAGGCGGAACTCAGCCAGCCCTTGACAGCAGGAGGAGCAATCTCAGAACTGTTA

ORF Protein

Cloned ORF protein sequence for pFN21AB9771 Download

>KIBB9771  538 aa
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQ
NKVLVCPMKSAPVMLTLSDSKHVFLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKT
DSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPP
DAVQTSLMDEGASSEKKRQSSADGSQPPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSK
KKQAGRPKGSKGKEKDSPFKPKLYKGDRGLPLEGSAKGKVQAELSQPLTAGGAISELL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9771 Download

>pFN21AB9771  6319 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAACCTCGAGTTGCTGGAGTCCTTTGGGCAGAA
CTATCCAGAGGAAGCTGATGGAACTTTGGATTGTATCAGCATGGCTTTGACTTGCACCTT
TAACAGGTGGGGCACACTGCTTGCAGTTGGCTGTAATGATGGCCGAATTGTCATCTGGGA
TTTCTTGACAAGAGGCATTGCTAAAATAATTAGTGCACACATCCATCCAGTGTGTTCTTT
ATGCTGGAGCCGAGATGGTCATAAACTCGTGAGTGCTTCCACTGATAACATAGTGTCACA
GTGGGATGTTCTTTCAGGCGACTGTGACCAGAGGTTTCGATTCCCTTCACCCATCTTAAA
AGTCCAATATCATCCACGAGATCAGAACAAGGTTCTCGTGTGTCCCATGAAATCTGCTCC
TGTCATGTTGACCCTTTCAGATTCCAAACATGTTTTTCTGCCGGTGGACGATGACTCCGA
TTTGAACGTTGTGGCATCTTTTGATAGGCGAGGGGAATATATTTATACGGGAAACGCAAA
AGGCAAGATTTTGGTCCTAAAAACAGATTCTCAGGATCTTGTTGCTTCCTTCAGAGTGAC
AACTGGAACAAGCAATACCACAGCCATTAAGTCAATTGAGTTTGCCCGGAAGGGGAGTTG
CTTTTTAATTAACACGGCAGATCGAATAATCAGAGTTTATGATGGCAGAGAAATCTTAAC
ATGTGGAAGAGATGGAGAGCCTGAACCTATGCAGAAATTGCAGGATTTGGTGAATAGGAC
CCCATGGAAGAAATGTTGTTTCTCTGGGGATGGGGAATACATCGTGGCAGGTTCTGCCCG
GCAGCATGCCCTGTACATCTGGGAGAAGAGCATTGGCAACCTGGTGAAGATTCTCCATGG
GACGAGAGGAGAACTCCTCTTGGATGTAGCTTGGCATCCTGTTCGACCCATCATAGCATC
CATTTCCAGTGGAGTGGTATCTATCTGGGCACAGAATCAAGTAGAAAACTGGAGTGCATT
TGCACCAGACTTCAAAGAATTGGATGAAAATGTAGAATACGAAGAAAGGGAATCAGAGTT
TGATATTGAAGATGAAGATAAGAGTGAGCCTGAGCAGACAGGGGCTGATGCTGCAGAAGA
TGAGGAAGTGGATGTCACCAGCGTGGACCCTATTGCTGCCTTCTGTAGCAGTGATGAAGA
GCTGGAAGATTCAAAGGCTCTATTGTATTTACCCATTGCCCCTGAGGTAGAAGACCCAGA
AGAAAATCCTTACGGCCCCCCACCGGATGCAGTCCAAACCTCCTTGATGGATGAAGGGGC
TAGTTCAGAGAAGAAGAGGCAGTCCTCAGCAGATGGGTCCCAGCCACCTAAGAAGAAACC
CAAAACAACCAATATAGAACTTCAAGGAGTACCAAATGATGAAGTCCATCCACTACTGGG
TGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGATCAAAAGG
TAAAGAGAAAGATTCTCCATTTAAACCGAAACTCTACAAAGGGGACAGAGGTTTACCTCT
GGAAGGATCAGCGAAGGGTAAAGTGCAGGCGGAACTCAGCCAGCCCTTGACAGCAGGAGG
AGCAATCTCAGAACTGTTAGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGA
GTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGT
TGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCA
GACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAA
TGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAAT
AAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGG
GAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATC
CTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGT
CAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACT
TTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT
GTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCA
CGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
GAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCC
CGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTG
GTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTA
TGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATC
GGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTT
GATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATG
CCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGC
TCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCT
CGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTAC
ACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCC
TCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAG
CTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACA
TGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTT
TCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGC
GAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCT
CTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCG
TGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCA
AGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACT
ATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTA
ACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTA
ACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCT
TCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTT
TTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGA
TCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCA
TGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGC
ACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATT
AAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTT
ATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGC
CGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCAC
TTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCG
GCGTAGAGGATCGAGATCT