TBR1 ORF clone pFN21AB9655

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Halotag ORF Clone pFN21AB9655

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Clone info.

Species

human

Clone Name

pFN21AB9655 Sequence (with vector) Restriction Map

Product ID

FHC11886

Flexi Clone PID

FXC11886

ORF Sequence

DNA sequence (2046 bp)
Protein sequence (682 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529217]

Gene

KIBB9655

Symbol

TBR1

Alias : IDDAS, TBR-1, TES-56

Description

T-box, brain, 1

Original Clone ID

cs00200

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 2046 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 682 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33310.1 3.5e-202 100.0 TBR1 CCDS63585.1 6.1e-59 52.6 EOMES CCDS2646.1 3e-50 50.4 EOMES CCDS63584.1 2.6e-48 56.4 EOMES CCDS11514.1 4.2e-44 42.8 TBX21 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001699 221 245 PR00937 Transcription factor IPR001699 287 300 PR00937 Transcription factor IPR001699 304 313 PR00937 Transcription factor IPR001699 326 340 PR00937 Transcription factor IPR001699 364 377 PR00937 Transcription factor IPR001699 385 393 PR00937 Transcription factor HMMPfam IPR001699 205 394 PF00907 Transcription factor HMMSmart IPR001699 203 398 SM00425 Transcription factor ProfileScan IPR001699 208 393 PS50252 Transcription factor
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006584 682 604616 100.0 100.0 NP_001265111 705 604615 52.6 86.1 NP_005433 686 604615 50.4 86.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9655 Download

>KIBB9655  2046 bp
ATGCAGCTGGAGCACTGCCTTTCTCCTTCTATCATGCTCTCCAAGAAATTTCTCAATGTG
AGCAGCAGCTACCCACATTCAGGCGGATCCGAGCTTGTCTTGCACGATCATCCCATTATC
TCGACCACTGACAACCTGGAGAGAAGTTCACCTTTGAAAAAAATTACCAGGGGGATGACG
AATCAGTCAGATACAGACAATTTTCCTGACTCCAAGGACTCACCAGGGGACGTCCAGAGA
AGTAAACTCTCTCCTGTCTTGGACGGGGTCTCTGAGCTTCGTCACAGTTTCGATGGCTCT
GCTGCAGATCGCTACCTCCTCTCTCAGTCCAGCCAGCCACAGTCTGCGGCCACTGCTCCC
AGTGCCATGTTCCCGTACCCCGGCCAGCACGGACCGGCGCACCCCGCCTTCTCCATCGGC
AGCCCTAGCCGCTACATGGCCCACCACCCGGTCATCACCAACGGAGCCTACAACAGCCTC
CTGTCCAACTCCTCGCCGCAGGGATACCCCACGGCCGGCTACCCCTACCCACAGCAGTAC
GGCCACTCCTACCAAGGAGCTCCGTTCTACCAGTTCTCCTCCACCCAGCCGGGGCTGGTG
CCCGGCAAAGCACAGGTGTACCTGTGCAACAGGCCCCTTTGGCTGAAATTTCACCGGCAC
CAAACGGAGATGATCATCACCAAACAGGGAAGGCGCATGTTTCCTTTTTTAAGTTTTAAC
ATTTCTGGTCTCGATCCCACGGCTCATTACAATATTTTTGTGGATGTGATTTTGGCGGAT
CCCAATCACTGGAGGTTTCAAGGAGGCAAATGGGTTCCTTGCGGCAAAGCGGACACCAAT
GTGCAAGGAAATCGGGTCTATATGCATCCGGATTCCCCCAACACTGGGGCTCACTGGATG
CGCCAAGAAATCTCTTTTGGAAAATTAAAACTTACGAACAACAAAGGAGCTTCAAATAAC
AATGGGCAGATGGTGGTTTTACAGTCCTTGCACAAGTACCAGCCCCGCCTGCATGTGGTG
GAAGTGAACGAGGACGGCACGGAGGACACTAGCCAGCCCGGCCGCGTGCAGACGTTCACT
TTCCCTGAGACTCAGTTCATCGCCGTCACCGCCTACCAGAACACGGATATTACACAACTG
AAAATAGATCACAACCCTTTTGCAAAAGGATTTCGGGATAATTATGACACGATCTACACC
GGCTGTGACATGGACCGCCTGACCCCCTCGCCCAACGACTCGCCGCGCTCGCAGATCGTG
CCCGGGGCCCGCTACGCCATGGCCGGCTCTTTCCTGCAGGACCAGTTCGTGAGCAACTAC
GCCAAGGCCCGCTTCCACCCGGGCGCGGGCGCGGGCCCCGGGCCGGGTACGGACCGCAGC
GTGCCGCACACCAACGGGCTGCTGTCGCCGCAGCAGGCCGAGGACCCGGGCGCGCCCTCG
CCGCAACGCTGGTTTGTGACGCCGGCCAACAACCGGCTGGACTTCGCGGCCTCGGCCTAT
GACACGGCCACGGACTTCGCGGGCAACGCGGCCACGCTGCTCTCTTACGCGGCGGCGGGC
GTGAAGGCGCTGCCGCTGCAGGCTGCAGGCTGCACTGGCCGCCCGCTCGGCTACTACGCC
GACCCGTCGGGCTGGGGCGCCCGCAGTCCCCCGCAGTACTGCGGCACCAAGTCGGGCTCG
GTGCTGCCCTGCTGGCCCAACAGCGCCGCGGCCGCCGCGCGCATGGCCGGCGCCAATCCC
TACCTGGGCGAGGAGGCCGAGGGCCTGGCCGCCGAGCGCTCGCCGCTGCCGCCCGGCGCC
GCCGAGGACGCCAAGCCCAAGGACCTGTCCGATTCCAGCTGGATCGAGACGCCCTCCTCG
ATCAAGTCCATCGACTCCAGCGACTCGGGGATTTACGAGCAGGCCAAGCGGAGGCGGATC
TCGCCGGCCGACACGCCCGTGTCCGAGAGTTCGTCCCCGCTCAAGAGCGAGGTGCTGGCC
CAGCGGGACTGCGAGAAGAACTGCGCCAAGGACATTAGCGGCTACTATGGCTTCTACTCG
CACAGC

ORF Protein

Cloned ORF protein sequence for pFN21AB9655 Download

>KIBB9655  682 aa
MQLEHCLSPSIMLSKKFLNVSSSYPHSGGSELVLHDHPIISTTDNLERSSPLKKITRGMT
NQSDTDNFPDSKDSPGDVQRSKLSPVLDGVSELRHSFDGSAADRYLLSQSSQPQSAATAP
SAMFPYPGQHGPAHPAFSIGSPSRYMAHHPVITNGAYNSLLSNSSPQGYPTAGYPYPQQY
GHSYQGAPFYQFSSTQPGLVPGKAQVYLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFN
ISGLDPTAHYNIFVDVILADPNHWRFQGGKWVPCGKADTNVQGNRVYMHPDSPNTGAHWM
RQEISFGKLKLTNNKGASNNNGQMVVLQSLHKYQPRLHVVEVNEDGTEDTSQPGRVQTFT
FPETQFIAVTAYQNTDITQLKIDHNPFAKGFRDNYDTIYTGCDMDRLTPSPNDSPRSQIV
PGARYAMAGSFLQDQFVSNYAKARFHPGAGAGPGPGTDRSVPHTNGLLSPQQAEDPGAPS
PQRWFVTPANNRLDFAASAYDTATDFAGNAATLLSYAAAGVKALPLQAAGCTGRPLGYYA
DPSGWGARSPPQYCGTKSGSVLPCWPNSAAAAARMAGANPYLGEEAEGLAAERSPLPPGA
AEDAKPKDLSDSSWIETPSSIKSIDSSDSGIYEQAKRRRISPADTPVSESSSPLKSEVLA
QRDCEKNCAKDISGYYGFYSHS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9655 Download

>pFN21AB9655  6751 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCAGCTGGAGCACTGCCTTTCTCCTTCTATCAT
GCTCTCCAAGAAATTTCTCAATGTGAGCAGCAGCTACCCACATTCAGGCGGATCCGAGCT
TGTCTTGCACGATCATCCCATTATCTCGACCACTGACAACCTGGAGAGAAGTTCACCTTT
GAAAAAAATTACCAGGGGGATGACGAATCAGTCAGATACAGACAATTTTCCTGACTCCAA
GGACTCACCAGGGGACGTCCAGAGAAGTAAACTCTCTCCTGTCTTGGACGGGGTCTCTGA
GCTTCGTCACAGTTTCGATGGCTCTGCTGCAGATCGCTACCTCCTCTCTCAGTCCAGCCA
GCCACAGTCTGCGGCCACTGCTCCCAGTGCCATGTTCCCGTACCCCGGCCAGCACGGACC
GGCGCACCCCGCCTTCTCCATCGGCAGCCCTAGCCGCTACATGGCCCACCACCCGGTCAT
CACCAACGGAGCCTACAACAGCCTCCTGTCCAACTCCTCGCCGCAGGGATACCCCACGGC
CGGCTACCCCTACCCACAGCAGTACGGCCACTCCTACCAAGGAGCTCCGTTCTACCAGTT
CTCCTCCACCCAGCCGGGGCTGGTGCCCGGCAAAGCACAGGTGTACCTGTGCAACAGGCC
CCTTTGGCTGAAATTTCACCGGCACCAAACGGAGATGATCATCACCAAACAGGGAAGGCG
CATGTTTCCTTTTTTAAGTTTTAACATTTCTGGTCTCGATCCCACGGCTCATTACAATAT
TTTTGTGGATGTGATTTTGGCGGATCCCAATCACTGGAGGTTTCAAGGAGGCAAATGGGT
TCCTTGCGGCAAAGCGGACACCAATGTGCAAGGAAATCGGGTCTATATGCATCCGGATTC
CCCCAACACTGGGGCTCACTGGATGCGCCAAGAAATCTCTTTTGGAAAATTAAAACTTAC
GAACAACAAAGGAGCTTCAAATAACAATGGGCAGATGGTGGTTTTACAGTCCTTGCACAA
GTACCAGCCCCGCCTGCATGTGGTGGAAGTGAACGAGGACGGCACGGAGGACACTAGCCA
GCCCGGCCGCGTGCAGACGTTCACTTTCCCTGAGACTCAGTTCATCGCCGTCACCGCCTA
CCAGAACACGGATATTACACAACTGAAAATAGATCACAACCCTTTTGCAAAAGGATTTCG
GGATAATTATGACACGATCTACACCGGCTGTGACATGGACCGCCTGACCCCCTCGCCCAA
CGACTCGCCGCGCTCGCAGATCGTGCCCGGGGCCCGCTACGCCATGGCCGGCTCTTTCCT
GCAGGACCAGTTCGTGAGCAACTACGCCAAGGCCCGCTTCCACCCGGGCGCGGGCGCGGG
CCCCGGGCCGGGTACGGACCGCAGCGTGCCGCACACCAACGGGCTGCTGTCGCCGCAGCA
GGCCGAGGACCCGGGCGCGCCCTCGCCGCAACGCTGGTTTGTGACGCCGGCCAACAACCG
GCTGGACTTCGCGGCCTCGGCCTATGACACGGCCACGGACTTCGCGGGCAACGCGGCCAC
GCTGCTCTCTTACGCGGCGGCGGGCGTGAAGGCGCTGCCGCTGCAGGCTGCAGGCTGCAC
TGGCCGCCCGCTCGGCTACTACGCCGACCCGTCGGGCTGGGGCGCCCGCAGTCCCCCGCA
GTACTGCGGCACCAAGTCGGGCTCGGTGCTGCCCTGCTGGCCCAACAGCGCCGCGGCCGC
CGCGCGCATGGCCGGCGCCAATCCCTACCTGGGCGAGGAGGCCGAGGGCCTGGCCGCCGA
GCGCTCGCCGCTGCCGCCCGGCGCCGCCGAGGACGCCAAGCCCAAGGACCTGTCCGATTC
CAGCTGGATCGAGACGCCCTCCTCGATCAAGTCCATCGACTCCAGCGACTCGGGGATTTA
CGAGCAGGCCAAGCGGAGGCGGATCTCGCCGGCCGACACGCCCGTGTCCGAGAGTTCGTC
CCCGCTCAAGAGCGAGGTGCTGGCCCAGCGGGACTGCGAGAAGAACTGCGCCAAGGACAT
TAGCGGCTACTATGGCTTCTACTCGCACAGCGTTTAAACGAATTCGGGCTCGGTACCCGG
GGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAA
AGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGG
CCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATG
CAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATT
ATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAG
GGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAA
TTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACA
TTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACG
TCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATA
CATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGA
AAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCA
TTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGAT
CAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAG
AGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGC
GCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCT
CAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACA
GTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTT
CTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCAT
GTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGT
GACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTA
CTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGA
CCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGT
GAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATC
GTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCT
GAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCC
AACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACG
CAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGT
TGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAA
GTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCT
CCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCC
CTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGG
TCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCT
TATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAG
CAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGA
AGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGA
AGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTG
GTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAG
AAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAG
GGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAA
ATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAG
CTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATA
CGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTA
CCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTA
TGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCC
ACGATGCGTCCGGCGTAGAGGATCGAGATCT