NEUROD6 ORF clone pFN21AB9629

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Halotag ORF Clone pFN21AB9629

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Clone info.

Species

human

Clone Name

pFN21AB9629 Sequence (with vector) Restriction Map

Product ID

FHC03207

Flexi Clone PID

FXC03207

ORF Sequence

DNA sequence (1011 bp)
Protein sequence (337 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464632]

Gene

KIBB9629

Symbol

NEUROD6

Alias : Atoh2, MATH2, Math-2, NEX1M, Nex1, bHLHa2

Description

neuronal differentiation 6

Original Clone ID

cp00212

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1011 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 337 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5434.1 2e-98 100.0 NEUROD6 CCDS2283.1 3.9e-40 49.9 NEUROD1 CCDS8886.1 7.5e-32 51.3 NEUROD4 CCDS11338.1 4.8e-30 51.7 NEUROD2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001092 95 146 PF00010 Helix-loop-helix DNA-binding domain IPR022575 153 272 PF12533 Neurogenic differentiation factor HMMSmart IPR001092 100 152 SM00353 Helix-loop-helix DNA-binding domain ProfileScan IPR001092 95 147 PS50888 Helix-loop-helix DNA-binding domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_073565 337 611513 100.0 100.0 NP_002491 356 125853,601724,606394 49.9 99.7 NP_006151 382 601725 51.7 90.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9629 Download

>KIBB9629  1011 bp
ATGTTAACACTACCGTTTGATGAGTCTGTTGTAATGCCAGAATCCCAGATGTGCAGAAAG
TTTTCTAGAGAATGCGAGGACCAGAAGCAAATTAAGAAGCCAGAAAGCTTTTCCAAACAG
ATTGTCCTTCGAGGAAAGAGCATCAAAAGGGCCCCTGGAGAAGAAACCGAGAAAGAAGAA
GAGGAGGAAGACAGGGAAGAGGAAGATGAAAATGGGTTGCCTAGAAGGAGGGGTCTTAGG
AAAAAAAAGACAACAAAGCTGCGATTGGAAAGGGTCAAGTTCAGGAGACAGGAAGCGAAC
GCGCGCGAGAGGAACAGGATGCACGGCCTCAACGACGCTCTGGACAACTTAAGAAAAGTG
GTCCCCTGTTATTCTAAAACCCAGAAACTGTCCAAAATAGAGACTTTACGACTGGCCAAA
AACTACATCTGGGCACTTTCTGAAATTCTGAGAATCGGCAAGAGACCAGATCTGCTCACA
TTCGTCCAAAACTTATGCAAAGGTCTTTCCCAGCCAACTACAAACTTGGTGGCAGGCTGC
TTGCAGCTCAACGCCAGGAGTTTCCTGATGGGTCAGGGTGGGGAGGCTGCACACCACACA
AGGTCACCCTACTCTACCTTCTACCCACCCTACCACAGCCCTGAGCTCACCACTCCCCCG
GGGCATGGGACTCTTGATAATTCCAAGTCCATGAAACCCTACAATTATTGCAGTGCGTAT
GAATCCTTCTATGAAAGTACTTCCCCTGAGTGTGCCAGCCCTCAGTTTGAAGGTCCCTTA
AGTCCTCCCCCAATTAACTATAATGGGATATTTTCCCTGAAGCAAGAAGAAACCTTGGAC
TATGGTAAAAATTACAATTACGGCATGCATTACTGTGCAGTGCCACCCAGGGGTCCCCTT
GGGCAGGGTGCCATGTTCAGGTTGCCCACCGACAGCCACTTCCCTTACGACTTACATCTG
CGCAGCCAATCTCTCACAATGCAAGATGAATTAAATGCAGTTTTTCATAAT

ORF Protein

Cloned ORF protein sequence for pFN21AB9629 Download

>KIBB9629  337 aa
MLTLPFDESVVMPESQMCRKFSRECEDQKQIKKPESFSKQIVLRGKSIKRAPGEETEKEE
EEEDREEEDENGLPRRRGLRKKKTTKLRLERVKFRRQEANARERNRMHGLNDALDNLRKV
VPCYSKTQKLSKIETLRLAKNYIWALSEILRIGKRPDLLTFVQNLCKGLSQPTTNLVAGC
LQLNARSFLMGQGGEAAHHTRSPYSTFYPPYHSPELTTPPGHGTLDNSKSMKPYNYCSAY
ESFYESTSPECASPQFEGPLSPPPINYNGIFSLKQEETLDYGKNYNYGMHYCAVPPRGPL
GQGAMFRLPTDSHFPYDLHLRSQSLTMQDELNAVFHN

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9629 Download

>pFN21AB9629  5716 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTTAACACTACCGTTTGATGAGTCTGTTGTAAT
GCCAGAATCCCAGATGTGCAGAAAGTTTTCTAGAGAATGCGAGGACCAGAAGCAAATTAA
GAAGCCAGAAAGCTTTTCCAAACAGATTGTCCTTCGAGGAAAGAGCATCAAAAGGGCCCC
TGGAGAAGAAACCGAGAAAGAAGAAGAGGAGGAAGACAGGGAAGAGGAAGATGAAAATGG
GTTGCCTAGAAGGAGGGGTCTTAGGAAAAAAAAGACAACAAAGCTGCGATTGGAAAGGGT
CAAGTTCAGGAGACAGGAAGCGAACGCGCGCGAGAGGAACAGGATGCACGGCCTCAACGA
CGCTCTGGACAACTTAAGAAAAGTGGTCCCCTGTTATTCTAAAACCCAGAAACTGTCCAA
AATAGAGACTTTACGACTGGCCAAAAACTACATCTGGGCACTTTCTGAAATTCTGAGAAT
CGGCAAGAGACCAGATCTGCTCACATTCGTCCAAAACTTATGCAAAGGTCTTTCCCAGCC
AACTACAAACTTGGTGGCAGGCTGCTTGCAGCTCAACGCCAGGAGTTTCCTGATGGGTCA
GGGTGGGGAGGCTGCACACCACACAAGGTCACCCTACTCTACCTTCTACCCACCCTACCA
CAGCCCTGAGCTCACCACTCCCCCGGGGCATGGGACTCTTGATAATTCCAAGTCCATGAA
ACCCTACAATTATTGCAGTGCGTATGAATCCTTCTATGAAAGTACTTCCCCTGAGTGTGC
CAGCCCTCAGTTTGAAGGTCCCTTAAGTCCTCCCCCAATTAACTATAATGGGATATTTTC
CCTGAAGCAAGAAGAAACCTTGGACTATGGTAAAAATTACAATTACGGCATGCATTACTG
TGCAGTGCCACCCAGGGGTCCCCTTGGGCAGGGTGCCATGTTCAGGTTGCCCACCGACAG
CCACTTCCCTTACGACTTACATCTGCGCAGCCAATCTCTCACAATGCAAGATGAATTAAA
TGCAGTTTTTCATAATGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTC
GACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGG
CTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGAC
ATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGC
TTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAA
CAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAG
GTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTC
TTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAG
CACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTT
CGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATG
AGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTT
TTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGA
GTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAA
GAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGT
ATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTT
GAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGC
AGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGA
GGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGAT
CGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCT
GTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCC
CGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCG
GCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGC
GGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACG
ACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCA
CTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTC
ACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGT
GAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCC
ATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAA
ACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTC
CTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGG
CGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGC
TGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATC
GTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACA
GGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACT
ACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCG
GAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTT
TTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCT
TTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGA
GATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACG
CTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAG
TGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATC
AGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGT
GATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTA
CTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCG
TAGAGGATCGAGATCT