ZSCAN9 ORF clone pFN21AB7952

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Halotag ORF Clone pFN21AB7952

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Clone info.

Species

human

Clone Name

pFN21AB7952 Sequence (with vector) Restriction Map

Product ID

FHC06024

Flexi Clone PID

FXC06024

ORF Sequence

DNA sequence (1182 bp)
Protein sequence (394 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB587454]

Gene

KIBB7952

Symbol

ZSCAN9

Alias : PRD51, ZNF193

Description

zinc finger and SCAN domain containing 9, transcript variant 2

Original Clone ID

cs00452

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1182 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 394 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4646.1 5.6e-96 100.0 ZSCAN9 CCDS56407.1 3.9e-49 88.0 ZSCAN9 CCDS47393.1 1.2e-46 54.8 ZSCAN23 CCDS4649.1 6.6e-40 51.2 ZSCAN31 CCDS4644.1 1.1e-36 50.3 ZSCAN16 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003309 48 140 PF02023 Transcription regulator SCAN IPR007087 254 276 PF00096 Zinc finger IPR007087 282 304 PF00096 Zinc finger IPR007087 310 332 PF00096 Zinc finger IPR007087 338 360 PF00096 Zinc finger HMMSmart IPR003309 48 160 SM00431 Transcription regulator SCAN IPR015880 254 276 SM00355 Zinc finger IPR015880 282 304 SM00355 Zinc finger IPR015880 310 332 SM00355 Zinc finger IPR015880 338 360 SM00355 Zinc finger IPR015880 366 388 SM00355 Zinc finger ProfileScan IPR003309 52 134 PS50804 Transcription regulator SCAN IPR007087 254 281 PS50157 Zinc finger IPR007087 282 309 PS50157 Zinc finger IPR007087 310 337 PS50157 Zinc finger IPR007087 338 365 PS50157 Zinc finger IPR007087 366 389 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016866756 394 602246 100.0 100.0 NP_001186409 394 602246 100.0 100.0 NP_006290 394 602246 100.0 100.0 XP_011513180 526 602246 100.0 100.0 NP_001186408 445 602246 88.0 95.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7952 Download

>KIBB7952  1182 bp
ATGAATACAAACTCAAAGGAGGTTTTATCCCTGGGTGTTCAAGTTCCCGAGGCATGGGAA
GAACTTCTGACAATGAAAGTGGAAGCAAAAAGTCACCTTCAATGGCAGGAATCCAGACTG
AAACGCAGTAATCCACTGGCAAGGGAAATCTTCCGAAGGCACTTTCGACAGCTGTGCTAC
CAAGAGACCCCTGGACCAAGGGAGGCTCTTACTCGACTCCAGGAACTTTGCTACCAGTGG
TTGAGGCCACATGTGAGCACAAAGGAGCAGATTTTGGATCTGCTGGTGCTGGAGCAGTTT
CTATCCATTCTGCCCAAGGAGCTCCAGGGCTGGGTGAGGGAACACTGTCCAGAGAGTGGA
GAAGAGGCTGTGATTTTGCTGGAGGATCTGGAGAGAGAGCTCGATGAACCACAACATGAG
ATGGTGGCCCACAGACACAGACAAGAAGTCCTCTGTAAAGAGATGGTGCCTCTAGCAGAG
CAGACACCACTGACCCTTCAGTCCCAGCCTAAGGAGCCACAGCTCACATGTGACTCTGCT
CAGAAGTGCCATTCTATTGGAGAGACAGATGAAGTAACCAAGACTGAGGACAGAGAGTTG
GTGCTAAGGAAAGACTGTCCTAAGATAGTGGAACCACATGGGAAAATGTTTAATGAGCAG
ACCTGGGAGGTATCACAGCAGGATCCCTCACATGGAGAAGTTGGTGAACATAAGGATAGG
ATAGAGAGGCAGTGGGGAAACCTCTTAGGAGAGGGGCAACACAAATGTGATGAATGTGGG
AAGAGCTTTACTCAGAGCTCAGGTCTCATTCGACATCAAAGAATTCATACTGGAGAAAGA
CCTTATGAATGTAATGAATGTGGGAAAGCCTTCAGTCGAAGTTCTGGTCTTTTTAATCAC
CGAGGAATCCACAATATACAGAAACGGTACCACTGCAAGGAGTGTGGGAAGGTCTTCAGT
CAGAGTGCGGGTCTTATCCAGCATCAGAGAATCCACAAAGGAGAAAAGCCGTATCAGTGC
AGCCAGTGCAGTAAGAGCTACAGTCGGCGTTCATTTCTCATTGAACATCAGAGAAGCCAC
ACAGGGGAGCGACCTCACCAGTGCATTGAATGTGGGAAAAGCTTTAATCGACACTGCAAC
CTCATTCGCCATCAGAAGATCCACACAGTGGCTGAGCTGGTC

ORF Protein

Cloned ORF protein sequence for pFN21AB7952 Download

>KIBB7952  394 aa
MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
QKCHSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDR
IERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNH
RGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSH
TGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7952 Download

>pFN21AB7952  5887 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAATACAAACTCAAAGGAGGTTTTATCCCTGGG
TGTTCAAGTTCCCGAGGCATGGGAAGAACTTCTGACAATGAAAGTGGAAGCAAAAAGTCA
CCTTCAATGGCAGGAATCCAGACTGAAACGCAGTAATCCACTGGCAAGGGAAATCTTCCG
AAGGCACTTTCGACAGCTGTGCTACCAAGAGACCCCTGGACCAAGGGAGGCTCTTACTCG
ACTCCAGGAACTTTGCTACCAGTGGTTGAGGCCACATGTGAGCACAAAGGAGCAGATTTT
GGATCTGCTGGTGCTGGAGCAGTTTCTATCCATTCTGCCCAAGGAGCTCCAGGGCTGGGT
GAGGGAACACTGTCCAGAGAGTGGAGAAGAGGCTGTGATTTTGCTGGAGGATCTGGAGAG
AGAGCTCGATGAACCACAACATGAGATGGTGGCCCACAGACACAGACAAGAAGTCCTCTG
TAAAGAGATGGTGCCTCTAGCAGAGCAGACACCACTGACCCTTCAGTCCCAGCCTAAGGA
GCCACAGCTCACATGTGACTCTGCTCAGAAGTGCCATTCTATTGGAGAGACAGATGAAGT
AACCAAGACTGAGGACAGAGAGTTGGTGCTAAGGAAAGACTGTCCTAAGATAGTGGAACC
ACATGGGAAAATGTTTAATGAGCAGACCTGGGAGGTATCACAGCAGGATCCCTCACATGG
AGAAGTTGGTGAACATAAGGATAGGATAGAGAGGCAGTGGGGAAACCTCTTAGGAGAGGG
GCAACACAAATGTGATGAATGTGGGAAGAGCTTTACTCAGAGCTCAGGTCTCATTCGACA
TCAAAGAATTCATACTGGAGAAAGACCTTATGAATGTAATGAATGTGGGAAAGCCTTCAG
TCGAAGTTCTGGTCTTTTTAATCACCGAGGAATCCACAATATACAGAAACGGTACCACTG
CAAGGAGTGTGGGAAGGTCTTCAGTCAGAGTGCGGGTCTTATCCAGCATCAGAGAATCCA
CAAAGGAGAAAAGCCGTATCAGTGCAGCCAGTGCAGTAAGAGCTACAGTCGGCGTTCATT
TCTCATTGAACATCAGAGAAGCCACACAGGGGAGCGACCTCACCAGTGCATTGAATGTGG
GAAAAGCTTTAATCGACACTGCAACCTCATTCGCCATCAGAAGATCCACACAGTGGCTGA
GCTGGTCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAG
GCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCA
CCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGA
TACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGT
GAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAAC
AACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTA
AGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTT
GCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTC
TGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAAT
GTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATG
AGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAA
CATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCAC
CCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTAC
ATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTT
CCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCC
GGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCA
CCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCC
ATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAG
GAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAA
CCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATG
GCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAA
TTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCG
GCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATT
GCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGT
CAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAG
CATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGG
CGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAG
GCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCC
GCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAG
GACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGA
CCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTC
ATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTG
TGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGT
CCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCA
GAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACA
CTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAG
TTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCA
AGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGG
GGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAA
AAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGC
CCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAA
TGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGAT
TGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCT
GAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCC
CTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATC
GAGATCT