CXXC1 ORF clone pFN21AB7894

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Halotag ORF Clone pFN21AB7894

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Clone info.

Species

human

Clone Name

pFN21AB7894 Sequence (with vector) Restriction Map

Product ID

FHC02185

Flexi Clone PID

FXC02185

ORF Sequence

DNA sequence (1968 bp)
Protein sequence (656 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527473]

Gene

KIBB7894

Symbol

CXXC1

Alias : 2410002I16Rik, 5830420C16Rik, CFP1, CGBP, HsT2645, PCCX1, PHF18, SPP1, ZCGPC1, hCGBP

Description

CXXC finger protein 1, transcript variant 2

Original Clone ID

cs00394

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1968 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 656 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11945.1 3e-189 100.0 CXXC1 CCDS45866.1 1.7e-188 99.4 CXXC1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR019787 28 76 PF00628 Zinc finger IPR002857 163 208 PF02008 Zinc finger IPR022056 400 636 PF12269 CpG binding protein HMMSmart IPR001965 28 74 SM00249 Zinc finger ProfileScan IPR019787 26 76 PS50016 Zinc finger IPR002857 160 209 PS51058 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016881207 656 609150 100.0 100.0 NP_055408 656 609150 100.0 100.0 NP_001095124 660 609150 99.4 100.0 XP_011524242 660 609150 99.4 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7894 Download

>KIBB7894  1968 bp
ATGGAGGGAGATGGTTCAGACCCAGAGCCTCCAGATGCCGGGGAGGACAGCAAGTCCGAG
AATGGGGAGAATGCGCCCATCTACTGCATCTGCCGCAAACCGGACATCAACTGCTTCATG
ATCGGGTGTGACAACTGCAATGAGTGGTTCCATGGGGACTGCATCCGGATCACTGAGAAG
ATGGCCAAGGCCATCCGGGAGTGGTACTGTCGGGAGTGCAGAGAGAAAGACCCCAAGCTA
GAGATTCGCTATCGGCACAAGAAGTCACGGGAGCGGGATGGCAATGAGCGGGACAGCAGT
GAGCCCCGGGATGAGGGTGGAGGGCGCAAGAGGCCTGTCCCTGATCCAGACCTGCAGCGC
CGGGCAGGGTCAGGGACAGGGGTTGGGGCCATGCTTGCTCGGGGCTCTGCTTCGCCCCAC
AAATCCTCTCCGCAGCCCTTGGTGGCCACACCCAGCCAGCATCACCAGCAGCAGCAGCAG
CAGATCAAACGGTCAGCCCGCATGTGTGGTGAGTGTGAGGCATGTCGGCGCACTGAGGAC
TGTGGTCACTGTGATTTCTGTCGGGACATGAAGAAGTTCGGGGGCCCCAACAAGATCCGG
CAGAAGTGCCGGCTGCGCCAGTGCCAGCTGCGGGCCCGGGAATCGTACAAGTACTTCCCT
TCCTCGCTCTCACCAGTGACGCCCTCAGAGTCCCTGCCAAGGCCCCGCCGGCCACTGCCC
ACCCAACAGCAGCCACAGCCATCACAGAAGTTAGGGCGCATCCGTGAAGATGAGGGGGCA
GTGGCGTCATCAACAGTCAAGGAGCCTCCTGAGGCTACAGCCACACCTGAGCCACTCTCA
GATGAGGACCTACCTCTGGATCCTGACCTGTATCAGGACTTCTGTGCAGGGGCCTTTGAT
GACCATGGCCTGCCCTGGATGAGCGACACAGAAGAGTCCCCATTCCTGGACCCCGCGCTG
CGGAAGAGGGCAGTGAAAGTGAAGCATGTGAAGCGTCGGGAGAAGAAGTCTGAGAAGAAG
AAGGAGGAGCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACAC
CCAGAGAGGGCTGATGCCAAGGACCCTGCGTCACTGCCCCAGTGCCTGGGGCCCGGCTGT
GTGCGCCCCGCCCAGCCCAGCTCCAAGTATTGCTCAGATGACTGTGGCATGAAGCTGGCA
GCCAACCGCATCTACGAGATCCTCCCCCAGCGCATCCAGCAGTGGCAGCAGAGCCCTTGC
ATTGCTGAAGAGCACGGCAAGAAGCTGCTCGAACGCATTCGCCGAGAGCAGCAGAGTGCC
CGCACCCGCCTTCAGGAAATGGAACGCCGATTCCATGAGCTTGAGGCCATCATTCTACGT
GCCAAGCAGCAGGCTGTGCGCGAGGATGAGGAGAGCAACGAGGGTGACAGTGATGACACA
GACCTGCAGATCTTCTGTGTTTCCTGTGGGCACCCCATCAACCCACGTGTTGCCTTGCGC
CACATGGAGCGCTGCTACGCCAAGTATGAGAGCCAGACGTCCTTTGGGTCCATGTACCCC
ACACGCATTGAAGGGGCCACACGACTCTTCTGTGATGTGTATAATCCTCAGAGCAAAACA
TACTGTAAGCGGCTCCAGGTGCTGTGCCCCGAGCACTCACGGGACCCCAAAGTGCCAGCT
GACGAGGTATGCGGGTGCCCCCTTGTACGTGATGTCTTTGAGCTCACGGGTGACTTCTGC
CGCCTGCCCAAGCGCCAGTGCAATCGCCATTACTGCTGGGAGAAGCTGCGGCGTGCGGAA
GTGGACTTGGAGCGCGTGCGTGTGTGGTACAAGCTGGACGAGCTGTTTGAGCAGGAGCGC
AATGTGCGCACAGCCATGACAAACCGCGCGGGATTGCTGGCCCTGATGCTGCACCAGACG
ATCCAGCACGATCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGC

ORF Protein

Cloned ORF protein sequence for pFN21AB7894 Download

>KIBB7894  656 aa
MEGDGSDPEPPDAGEDSKSENGENAPIYCICRKPDINCFMIGCDNCNEWFHGDCIRITEK
MAKAIREWYCRECREKDPKLEIRYRHKKSRERDGNERDSSEPRDEGGGRKRPVPDPDLQR
RAGSGTGVGAMLARGSASPHKSSPQPLVATPSQHHQQQQQQIKRSARMCGECEACRRTED
CGHCDFCRDMKKFGGPNKIRQKCRLRQCQLRARESYKYFPSSLSPVTPSESLPRPRRPLP
TQQQPQPSQKLGRIREDEGAVASSTVKEPPEATATPEPLSDEDLPLDPDLYQDFCAGAFD
DHGLPWMSDTEESPFLDPALRKRAVKVKHVKRREKKSEKKKEERYKRHRQKQKHKDKWKH
PERADAKDPASLPQCLGPGCVRPAQPSSKYCSDDCGMKLAANRIYEILPQRIQQWQQSPC
IAEEHGKKLLERIRREQQSARTRLQEMERRFHELEAIILRAKQQAVREDEESNEGDSDDT
DLQIFCVSCGHPINPRVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKT
YCKRLQVLCPEHSRDPKVPADEVCGCPLVRDVFELTGDFCRLPKRQCNRHYCWEKLRRAE
VDLERVRVWYKLDELFEQERNVRTAMTNRAGLLALMLHQTIQHDPLTTDLRSSADR

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7894 Download

>pFN21AB7894  6673 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAGGGAGATGGTTCAGACCCAGAGCCTCCAGA
TGCCGGGGAGGACAGCAAGTCCGAGAATGGGGAGAATGCGCCCATCTACTGCATCTGCCG
CAAACCGGACATCAACTGCTTCATGATCGGGTGTGACAACTGCAATGAGTGGTTCCATGG
GGACTGCATCCGGATCACTGAGAAGATGGCCAAGGCCATCCGGGAGTGGTACTGTCGGGA
GTGCAGAGAGAAAGACCCCAAGCTAGAGATTCGCTATCGGCACAAGAAGTCACGGGAGCG
GGATGGCAATGAGCGGGACAGCAGTGAGCCCCGGGATGAGGGTGGAGGGCGCAAGAGGCC
TGTCCCTGATCCAGACCTGCAGCGCCGGGCAGGGTCAGGGACAGGGGTTGGGGCCATGCT
TGCTCGGGGCTCTGCTTCGCCCCACAAATCCTCTCCGCAGCCCTTGGTGGCCACACCCAG
CCAGCATCACCAGCAGCAGCAGCAGCAGATCAAACGGTCAGCCCGCATGTGTGGTGAGTG
TGAGGCATGTCGGCGCACTGAGGACTGTGGTCACTGTGATTTCTGTCGGGACATGAAGAA
GTTCGGGGGCCCCAACAAGATCCGGCAGAAGTGCCGGCTGCGCCAGTGCCAGCTGCGGGC
CCGGGAATCGTACAAGTACTTCCCTTCCTCGCTCTCACCAGTGACGCCCTCAGAGTCCCT
GCCAAGGCCCCGCCGGCCACTGCCCACCCAACAGCAGCCACAGCCATCACAGAAGTTAGG
GCGCATCCGTGAAGATGAGGGGGCAGTGGCGTCATCAACAGTCAAGGAGCCTCCTGAGGC
TACAGCCACACCTGAGCCACTCTCAGATGAGGACCTACCTCTGGATCCTGACCTGTATCA
GGACTTCTGTGCAGGGGCCTTTGATGACCATGGCCTGCCCTGGATGAGCGACACAGAAGA
GTCCCCATTCCTGGACCCCGCGCTGCGGAAGAGGGCAGTGAAAGTGAAGCATGTGAAGCG
TCGGGAGAAGAAGTCTGAGAAGAAGAAGGAGGAGCGATACAAGCGGCATCGGCAGAAGCA
GAAGCACAAGGATAAATGGAAACACCCAGAGAGGGCTGATGCCAAGGACCCTGCGTCACT
GCCCCAGTGCCTGGGGCCCGGCTGTGTGCGCCCCGCCCAGCCCAGCTCCAAGTATTGCTC
AGATGACTGTGGCATGAAGCTGGCAGCCAACCGCATCTACGAGATCCTCCCCCAGCGCAT
CCAGCAGTGGCAGCAGAGCCCTTGCATTGCTGAAGAGCACGGCAAGAAGCTGCTCGAACG
CATTCGCCGAGAGCAGCAGAGTGCCCGCACCCGCCTTCAGGAAATGGAACGCCGATTCCA
TGAGCTTGAGGCCATCATTCTACGTGCCAAGCAGCAGGCTGTGCGCGAGGATGAGGAGAG
CAACGAGGGTGACAGTGATGACACAGACCTGCAGATCTTCTGTGTTTCCTGTGGGCACCC
CATCAACCCACGTGTTGCCTTGCGCCACATGGAGCGCTGCTACGCCAAGTATGAGAGCCA
GACGTCCTTTGGGTCCATGTACCCCACACGCATTGAAGGGGCCACACGACTCTTCTGTGA
TGTGTATAATCCTCAGAGCAAAACATACTGTAAGCGGCTCCAGGTGCTGTGCCCCGAGCA
CTCACGGGACCCCAAAGTGCCAGCTGACGAGGTATGCGGGTGCCCCCTTGTACGTGATGT
CTTTGAGCTCACGGGTGACTTCTGCCGCCTGCCCAAGCGCCAGTGCAATCGCCATTACTG
CTGGGAGAAGCTGCGGCGTGCGGAAGTGGACTTGGAGCGCGTGCGTGTGTGGTACAAGCT
GGACGAGCTGTTTGAGCAGGAGCGCAATGTGCGCACAGCCATGACAAACCGCGCGGGATT
GCTGGCCCTGATGCTGCACCAGACGATCCAGCACGATCCCCTCACTACCGACCTGCGCTC
CAGTGCCGACCGCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGAC
CTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTG
CTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATG
ATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTT
ATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAA
GTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTT
TTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTT
GCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCAC
CGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGG
GGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGT
ATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTT
GCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTG
GGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAA
CGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATT
GACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAG
TACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGT
GCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGA
CCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGT
TGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTA
GCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGG
CAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCC
CTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGT
ATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACG
GGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTG
ATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACT
CAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAG
CAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATA
GGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACC
CGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTG
TTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGC
TTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGG
GCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTC
TTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGA
TTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACG
GCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAA
AAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTG
TTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTT
CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGAT
TATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTG
GATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGG
GGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGG
CGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGAT
CGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTG
TCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAG
AGGATCGAGATCT