RRN3 ORF clone pFN21AB7886

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB7886

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Clone info.

Species

human

Clone Name

pFN21AB7886 Sequence (with vector) Restriction Map

Product ID

FHC03760

Flexi Clone PID

FXC03760

ORF Sequence

DNA sequence (1953 bp)
Protein sequence (651 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527833]

Gene

KIBB7886

Symbol

RRN3

Alias : A-270G1.2, TIFIA

Description

RRN3 homolog, RNA polymerase I transcription factor, transcript variant 1

Original Clone ID

cs00386

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1953 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 651 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10559.1 0 100.0 RRN3 CCDS73833.1 0 95.4 RRN3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR007991 54 587 PF05327 RNA polymerase I specific transcription initiation factor RRN3
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_060897 651 605121 100.0 100.0 NP_001287993 621 605121 95.4 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7886 Download

>KIBB7886  1953 bp
ATGGCGGCACCGCTACTTCACACGCGTTTGCCGGGAGATGCGGCCGCTTCGTCCTCTGCA
GTTAAGAAGCTGGGCGCGTCGAGGACTGGGATTTCAAATATGCGTGCATTAGAGAATGAC
TTTTTCAATTCTCCCCCAAGAAAAACTGTTCGGTTTGGTGGAACTGTGACAGAAGTCTTG
CTGAAGTACAAAAAGGGTGAAACAAATGACTTTGAGTTGTTGAAGAACCAGCTGTTAGAT
CCAGACATAAAGGATGACCAGATCATCAACTGGCTGCTAGAATTCCGTTCTTCTATCATG
TACTTGACAAAAGACTTTGAGCAACTTATCAGTATTATATTAAGATTGCCTTGGTTGAAT
AGAAGTCAAACAGTAGTGGAAGAGTATTTGGCTTTTCTTGGTAATCTTGTATCAGCACAG
ACTGTTTTCCTCAGACCGTGTCTCAGCATGATTGCTTCCCATTTTGTGCCTCCCCGAGTG
ATCATTAAGGAAGGCGATGTAGATGTTTCAGATTCTGATGATGAAGATGATAATCTTCCT
GCAAATTTTGACACATGTCACAGAGCCTTGCAAATAATAGCAAGATATGTACCATCGACA
CCGTGGTTTCTCATGCCAATACTGGTGGAAAAATTTCCATTTGTTCGAAAATCAGAGAGA
ACACTGGAATGTTACGTTCATAACTTACTAAGGATTAGTGTATATTTTCCAACCTTGAGG
CATGAAATTCTGGAGCTTATTATTGAAAAACTACTCAAGTTGGATGTGAATGCATCCCGG
CAGGGTATTGAAGATGCTGAAGAAACAGCAACTCAAACTTGTGGTGGGACAGATTCCACG
GAAGGATTGTTTAATATGGATGAAGATGAAGAAACTGAACATGAAACAAAGGCTGGTCCT
GAACGGCTCGACCAGATGGTGCATCCTGTAGCCGAGCGCCTGGACATCCTGATGTCTTTG
GTTTTGTCCTACATGAAGGATGTCTGCTATGTAGATGGTAAGGTTGATAACGGCAAAACA
AAGGATCTATATCGCGACCTGATAAACATCTTTGACAAACTCCTGTTGCCCACCCATGCC
TCCTGCCATGTACAGTTTTTCATGTTTTACCTCTGTAGTTTCAAATTGGGATTCGCAGAG
GCATTTTTGGAACATCTCTGGAAAAAATTGCAGGACCCAAGTAATCCTGCCATCATCAGG
CAGGCTGCTGGAAATTATATTGGAAGCTTTTTGGCAAGAGCTAAATTTATTCCTCTTATT
ACTGTAAAATCATGCCTAGATCTTTTGGTTAACTGGCTGCACATATACCTTAATAACCAG
GATTCGGGAACAAAGGCATTCTGCGATGTTGCTCTCCATGGACCATTTTACTCAGCCTGC
CAAGCTGTGTTCTACACCTTTGTTTTTAGACACAAGCAGCTTTTGAGCGGAAACCTGAAA
GAAGGTTTGCAGTATCTTCAGAGTCTGAATTTTGAGCGGATAGTGATGAGCCAGCTAAAT
CCCCTGAAGATTTGCCTGCCCTCAGTGGTTAACTTTTTTGCTGCAATCACAAATAAGTAC
CAGCTCGTCTTCTGCTACACCATCATTGAGAGGAACAATCGCCAGATGCTGCCAGTCATT
AGGAGTACCGCTGGAGGAGACTCAGTGCAGATCTGCACAAACCCGCTGGACACCTTCTTC
CCCTTTGATCCCTGTGTGCTGAAGAGGTCAAAGAAATTCATTGATCCTATTTATCAGGTG
TGGGAAGACATGAGTGCTGAAGAGCTACAGGAGTTCAAGAAACCCATGAAAAAGGACATA
GTGGAAGATGAAGATGATGACTTTCTGAAAGGCGAAGTGCCCCAGAATGATACCGTGATT
GGGATCACACCAAGCTCCTTTGACACGCATTTCCGAAGTCCTTCAAGTAGTGTGGGCTCC
CCACCCGTGTTGTACATGCAACCCAGTCCCCTC

ORF Protein

Cloned ORF protein sequence for pFN21AB7886 Download

>KIBB7886  651 aa
MAAPLLHTRLPGDAAASSSAVKKLGASRTGISNMRALENDFFNSPPRKTVRFGGTVTEVL
LKYKKGETNDFELLKNQLLDPDIKDDQIINWLLEFRSSIMYLTKDFEQLISIILRLPWLN
RSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPRVIIKEGDVDVSDSDDEDDNLP
ANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISVYFPTLR
HEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGP
ERLDQMVHPVAERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHA
SCHVQFFMFYLCSFKLGFAEAFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLI
TVKSCLDLLVNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLK
EGLQYLQSLNFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVI
RSTAGGDSVQICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDI
VEDEDDDFLKGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7886 Download

>pFN21AB7886  6658 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCGGCACCGCTACTTCACACGCGTTTGCCGGG
AGATGCGGCCGCTTCGTCCTCTGCAGTTAAGAAGCTGGGCGCGTCGAGGACTGGGATTTC
AAATATGCGTGCATTAGAGAATGACTTTTTCAATTCTCCCCCAAGAAAAACTGTTCGGTT
TGGTGGAACTGTGACAGAAGTCTTGCTGAAGTACAAAAAGGGTGAAACAAATGACTTTGA
GTTGTTGAAGAACCAGCTGTTAGATCCAGACATAAAGGATGACCAGATCATCAACTGGCT
GCTAGAATTCCGTTCTTCTATCATGTACTTGACAAAAGACTTTGAGCAACTTATCAGTAT
TATATTAAGATTGCCTTGGTTGAATAGAAGTCAAACAGTAGTGGAAGAGTATTTGGCTTT
TCTTGGTAATCTTGTATCAGCACAGACTGTTTTCCTCAGACCGTGTCTCAGCATGATTGC
TTCCCATTTTGTGCCTCCCCGAGTGATCATTAAGGAAGGCGATGTAGATGTTTCAGATTC
TGATGATGAAGATGATAATCTTCCTGCAAATTTTGACACATGTCACAGAGCCTTGCAAAT
AATAGCAAGATATGTACCATCGACACCGTGGTTTCTCATGCCAATACTGGTGGAAAAATT
TCCATTTGTTCGAAAATCAGAGAGAACACTGGAATGTTACGTTCATAACTTACTAAGGAT
TAGTGTATATTTTCCAACCTTGAGGCATGAAATTCTGGAGCTTATTATTGAAAAACTACT
CAAGTTGGATGTGAATGCATCCCGGCAGGGTATTGAAGATGCTGAAGAAACAGCAACTCA
AACTTGTGGTGGGACAGATTCCACGGAAGGATTGTTTAATATGGATGAAGATGAAGAAAC
TGAACATGAAACAAAGGCTGGTCCTGAACGGCTCGACCAGATGGTGCATCCTGTAGCCGA
GCGCCTGGACATCCTGATGTCTTTGGTTTTGTCCTACATGAAGGATGTCTGCTATGTAGA
TGGTAAGGTTGATAACGGCAAAACAAAGGATCTATATCGCGACCTGATAAACATCTTTGA
CAAACTCCTGTTGCCCACCCATGCCTCCTGCCATGTACAGTTTTTCATGTTTTACCTCTG
TAGTTTCAAATTGGGATTCGCAGAGGCATTTTTGGAACATCTCTGGAAAAAATTGCAGGA
CCCAAGTAATCCTGCCATCATCAGGCAGGCTGCTGGAAATTATATTGGAAGCTTTTTGGC
AAGAGCTAAATTTATTCCTCTTATTACTGTAAAATCATGCCTAGATCTTTTGGTTAACTG
GCTGCACATATACCTTAATAACCAGGATTCGGGAACAAAGGCATTCTGCGATGTTGCTCT
CCATGGACCATTTTACTCAGCCTGCCAAGCTGTGTTCTACACCTTTGTTTTTAGACACAA
GCAGCTTTTGAGCGGAAACCTGAAAGAAGGTTTGCAGTATCTTCAGAGTCTGAATTTTGA
GCGGATAGTGATGAGCCAGCTAAATCCCCTGAAGATTTGCCTGCCCTCAGTGGTTAACTT
TTTTGCTGCAATCACAAATAAGTACCAGCTCGTCTTCTGCTACACCATCATTGAGAGGAA
CAATCGCCAGATGCTGCCAGTCATTAGGAGTACCGCTGGAGGAGACTCAGTGCAGATCTG
CACAAACCCGCTGGACACCTTCTTCCCCTTTGATCCCTGTGTGCTGAAGAGGTCAAAGAA
ATTCATTGATCCTATTTATCAGGTGTGGGAAGACATGAGTGCTGAAGAGCTACAGGAGTT
CAAGAAACCCATGAAAAAGGACATAGTGGAAGATGAAGATGATGACTTTCTGAAAGGCGA
AGTGCCCCAGAATGATACCGTGATTGGGATCACACCAAGCTCCTTTGACACGCATTTCCG
AAGTCCTTCAAGTAGTGTGGGCTCCCCACCCGTGTTGTACATGCAACCCAGTCCCCTCGT
TTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAG
CTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGC
AATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGAT
GAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGT
GATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAAT
TGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAA
AACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCC
CTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTG
GCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGA
ACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAA
CCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGT
GTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACG
CTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTG
GATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATG
AGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAG
CAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACA
GAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATG
AGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACC
GCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTG
AATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACG
TTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGAC
TGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGG
TTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTG
GGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACT
ATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAA
TTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATAC
GGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAA
AGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTG
ACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAA
GATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGC
TTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCAC
GCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAAC
CCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGG
TAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGT
ATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGA
CAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCT
CTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGA
TTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACG
CTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCT
TCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTG
GGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTG
TACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGT
TTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTT
TTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCC
ATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT