RFX4 ORF clone pFN21AB7282

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Halotag ORF Clone pFN21AB7282

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Clone info.

Species

human

Clone Name

pFN21AB7282 Sequence (with vector) Restriction Map

Product ID

FHC02374

Flexi Clone PID

FXC02374

Original Clone PID

ORK02374

ORF Sequence

DNA sequence (2115 bp)
Protein sequence (705 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463215]

Gene

KIBB7282

Symbol

RFX4

Alias : NYD-SP10

Description

regulatory factor X, 4 (influences HLA class II expression)

Original Clone ID

fk07246

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 2115 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 705 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9108.1 8.9e-128 91.4 RFX4 CCDS9106.1 9.9e-128 95.9 RFX4 CCDS55880.1 1e-127 95.9 RFX4 CCDS5113.1 4e-19 36.8 RFX6 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003150 59 126 PF02257 DNA-binding RFX
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_115880 641 603958 91.4 86.2 NP_998759 735 603958 95.9 100.0 NP_001193620 744 603958 95.9 98.3 XP_011533891 892 612659,615710 35.6 86.1 NP_775831 928 612659,615710 36.8 86.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7282 Download

>KIBB7282  2115 bp
ATGCATTGTGGGTTACTGGAGGAACCCGACATGGATTCCACAGAGAGCTGGATTGAAAGA
TGTCTCAACGAAAGTGAAAACAAACGTTATTCCAGCCACACATCTCTGGGGAATGTTTCT
AATGATGAAAATGAGGAAAAAGAAAATAATAGAGCATCCAAGCCCCACTCCACTCCTGCT
ACTCTGCAATGGCTGGAGGAGAACTATGAGATTGCAGAGGGGGTCTGCATCCCTCGCAGT
GCCCTCTATATGCATTACCTGGATTTCTGCGAGAAGAATGATACCCAACCTGTCAATGCT
GCCAGCTTTGGAAAGATCATAAGGCAGCAGTTTCCTCAGTTAACCACCAGAAGACTCGGG
ACCCGAGGACAGTCAAAGTACCATTACTATGGCATTGCAGTGAAAGAAAGCTCCCAATAT
TATGATGTGATGTATTCCAAGAAAGGAGCTGCCTGGGTGAGTGAGACGGGCAAGAAAGAA
GTGAGCAAACAGACAGTGGCATATTCACCCCGGTCCAAACTCGGAACACTGCTGCCAGAA
TTTCCCAATGTCAAAGATCTAAATCTGCCAGCCAGCCTGCCTGAGGAGAAGGTTTCTACC
TTTATTATGATGTACAGAACACACTGTCAGAGAATACTGGGCTCCTCCACGGTGGTGAAC
ATTGTCGGCGTGTGTGACTCCATCCTCTACAAAGCTATCTCCGGGGTGCTGATGCCCACT
GTGCTGCAGGCATTACCTGACAGCTTAACTCAGGTGATTCGAAAGTTTGCCAAGCAACTG
GATGAGTGGCTAAAAGTGGCTCTCCACGACCTCCCAGAAAACTTGCGAAACATCAAGTTC
GAATTGTCGAGAAGGTTCTCCCAAATTCTGAGACGGCAAACATCACTAAATCATCTCTGC
CAGGCATCTCGAACAGTGATCCACAGTGCAGACATCACGTTCCAAATGCTGGAAGACTGG
AGGAACGTGGACCTGAACAGCATCACCAAGCAAACCCTTTACACCATGGAAGACTCTCGC
GATGAGCACCGGAAACTCATCACCCAATTATATCAGGAGTTTGACCATCTCTTGGAGGAG
CAGTCTCCCATCGAGTCCTACATTGAGTGGCTGGATACCATGGTTGACCGCTGTGTTGTG
AAGGTGGCTGCCAAGAGACAAGGGTCCTTGAAGAAAGTGGCCCAGCAGTTCCTCTTGATG
TGGTCCTGTTTCGGCACAAGGGTGATCCGGGACATGACCTTGCACAGCGCCCCCAGCTTC
GGGTCTTTTCACCTAATTCACTTAATGTTTGATGACTACGTGCTCTACCTGTTAGAATCT
CTGCACTGTCAGGAGCGGGCCAATGAGCTCATGCGAGCCATGAAGGGAGAAGGAAGCACT
GCAGAAGTCCGAGAAGAGATCATCTTGACAGAGGCTGCCGCACCAACCCCTTCACCAGTG
CCATCGTTTTCTCCAGCAAAATCTGCCACATCTGTGGAAGTGCCACCTCCCTCTTCCCCT
GTTAGCAATCCTTCCCCTGAGTACACTGGCCTCAGCACTACAGGAGCAATGCAGTCTTAC
ACGTGGTCTCTAACATACACAGTGACGACGGCTGCTGGGTCCCCAGCTGAGAACTCCCAA
CAGCTGCCCTGTATGAGGAACACTCATGTGCCTTCTTCCTCCGTCACACACAGGATACCA
GTTTATCCCCACAGAGAGGAACATGGATACACGGGAAGCTATAACTATGGGAGCTATGGC
AACCAGCATCCTCACCCCATGCAGAGCCAGTATCCGGCCCTCCCTCATGACACAGCTATC
TCTGGGCCACTCCACTATGCCCCTTACCACAGGAGCTCTGCACAGTACCCTTTTAATAGC
CCCACTTCCCGGATGGAACCTTGTTTGATGAGCAGTACTCCCAGACTGCATCCTACCCCA
GTCACTCCCCGCTGGCCAGAGGTGCCCTCAGCCAACACGTGCTACACAAGCCCGTCTGTG
CATTCTGCGAGGTACGGAAACTCTAGTGACATGTATACACCTCTGACAACGCGCAGGAAT
TCTGAATATGAGCACATGCAACACTTTCCTGGCTTTGCTTACATCAACGGAGAGGCCTCT
ACAGGATGGGCTAAA

ORF Protein

Cloned ORF protein sequence for pFN21AB7282 Download

>KIBB7282  705 aa
MHCGLLEEPDMDSTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPE
FPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILGSSTVVNIVGVCDSILYKAISGVLMPT
VLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLC
QASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEHRKLITQLYQEFDHLLEE
QSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSF
GSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPV
PSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQ
QLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAI
SGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSV
HSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEASTGWAK

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7282 Download

>pFN21AB7282  6820 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCATTGTGGGTTACTGGAGGAACCCGACATGGA
TTCCACAGAGAGCTGGATTGAAAGATGTCTCAACGAAAGTGAAAACAAACGTTATTCCAG
CCACACATCTCTGGGGAATGTTTCTAATGATGAAAATGAGGAAAAAGAAAATAATAGAGC
ATCCAAGCCCCACTCCACTCCTGCTACTCTGCAATGGCTGGAGGAGAACTATGAGATTGC
AGAGGGGGTCTGCATCCCTCGCAGTGCCCTCTATATGCATTACCTGGATTTCTGCGAGAA
GAATGATACCCAACCTGTCAATGCTGCCAGCTTTGGAAAGATCATAAGGCAGCAGTTTCC
TCAGTTAACCACCAGAAGACTCGGGACCCGAGGACAGTCAAAGTACCATTACTATGGCAT
TGCAGTGAAAGAAAGCTCCCAATATTATGATGTGATGTATTCCAAGAAAGGAGCTGCCTG
GGTGAGTGAGACGGGCAAGAAAGAAGTGAGCAAACAGACAGTGGCATATTCACCCCGGTC
CAAACTCGGAACACTGCTGCCAGAATTTCCCAATGTCAAAGATCTAAATCTGCCAGCCAG
CCTGCCTGAGGAGAAGGTTTCTACCTTTATTATGATGTACAGAACACACTGTCAGAGAAT
ACTGGGCTCCTCCACGGTGGTGAACATTGTCGGCGTGTGTGACTCCATCCTCTACAAAGC
TATCTCCGGGGTGCTGATGCCCACTGTGCTGCAGGCATTACCTGACAGCTTAACTCAGGT
GATTCGAAAGTTTGCCAAGCAACTGGATGAGTGGCTAAAAGTGGCTCTCCACGACCTCCC
AGAAAACTTGCGAAACATCAAGTTCGAATTGTCGAGAAGGTTCTCCCAAATTCTGAGACG
GCAAACATCACTAAATCATCTCTGCCAGGCATCTCGAACAGTGATCCACAGTGCAGACAT
CACGTTCCAAATGCTGGAAGACTGGAGGAACGTGGACCTGAACAGCATCACCAAGCAAAC
CCTTTACACCATGGAAGACTCTCGCGATGAGCACCGGAAACTCATCACCCAATTATATCA
GGAGTTTGACCATCTCTTGGAGGAGCAGTCTCCCATCGAGTCCTACATTGAGTGGCTGGA
TACCATGGTTGACCGCTGTGTTGTGAAGGTGGCTGCCAAGAGACAAGGGTCCTTGAAGAA
AGTGGCCCAGCAGTTCCTCTTGATGTGGTCCTGTTTCGGCACAAGGGTGATCCGGGACAT
GACCTTGCACAGCGCCCCCAGCTTCGGGTCTTTTCACCTAATTCACTTAATGTTTGATGA
CTACGTGCTCTACCTGTTAGAATCTCTGCACTGTCAGGAGCGGGCCAATGAGCTCATGCG
AGCCATGAAGGGAGAAGGAAGCACTGCAGAAGTCCGAGAAGAGATCATCTTGACAGAGGC
TGCCGCACCAACCCCTTCACCAGTGCCATCGTTTTCTCCAGCAAAATCTGCCACATCTGT
GGAAGTGCCACCTCCCTCTTCCCCTGTTAGCAATCCTTCCCCTGAGTACACTGGCCTCAG
CACTACAGGAGCAATGCAGTCTTACACGTGGTCTCTAACATACACAGTGACGACGGCTGC
TGGGTCCCCAGCTGAGAACTCCCAACAGCTGCCCTGTATGAGGAACACTCATGTGCCTTC
TTCCTCCGTCACACACAGGATACCAGTTTATCCCCACAGAGAGGAACATGGATACACGGG
AAGCTATAACTATGGGAGCTATGGCAACCAGCATCCTCACCCCATGCAGAGCCAGTATCC
GGCCCTCCCTCATGACACAGCTATCTCTGGGCCACTCCACTATGCCCCTTACCACAGGAG
CTCTGCACAGTACCCTTTTAATAGCCCCACTTCCCGGATGGAACCTTGTTTGATGAGCAG
TACTCCCAGACTGCATCCTACCCCAGTCACTCCCCGCTGGCCAGAGGTGCCCTCAGCCAA
CACGTGCTACACAAGCCCGTCTGTGCATTCTGCGAGGTACGGAAACTCTAGTGACATGTA
TACACCTCTGACAACGCGCAGGAATTCTGAATATGAGCACATGCAACACTTTCCTGGCTT
TGCTTACATCAACGGAGAGGCCTCTACAGGATGGGCTAAAGTTTAAACGAATTCGGGCTC
GGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACA
AAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCC
TTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACA
ACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTT
GTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTT
CAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGT
AAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAG
TAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTT
TCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAA
TAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTT
TTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGAT
GCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAG
ATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTG
CTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATA
CACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGAT
GGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCC
AACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATG
GGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAAC
GACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACT
GGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAA
GTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCT
GGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCC
TCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGA
CAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAA
GCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAG
GGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAA
AGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATC
GACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCC
CTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCG
CCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTT
CGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACC
GCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGC
CACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAG
AGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCG
CTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAA
CCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAG
GATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACT
CACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAT
AGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAA
AAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAG
GTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTG
CCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATT
AAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGT
ACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT