RBM23 ORF clone pFN21AB6628

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB6628

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Clone info.

Species

human

Clone Name

pFN21AB6628 Sequence (with vector) Restriction Map

Product ID

FHC03478

Flexi Clone PID

FXC03478

ORF Sequence

DNA sequence (1218 bp)
Protein sequence (406 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527562]

Gene

KIBB6628

Symbol

RBM23

Alias : CAPERbeta, PP239, RNPC4

Description

RNA binding motif protein 23, transcript variant 3

Original Clone ID

cs01228

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1218 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 406 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS41919.1 1.3e-94 99.5 RBM23 CCDS41920.1 1.1e-66 95.3 RBM23 CCDS41921.1 1.5e-66 91.6 RBM23 CCDS76658.1 6.5e-60 99.3 RBM23 CCDS56186.1 1.1e-49 60.3 RBM39 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 134 199 PF00076 RNA recognition motif domain IPR000504 231 300 PF00076 RNA recognition motif domain HMMSmart IPR000504 133 205 SM00360 RNA recognition motif domain IPR000504 230 303 SM00360 RNA recognition motif domain HMMTigr IPR006509 21 405 TIGR01622 Splicing factor ProfileScan IPR000504 132 209 PS50102 RNA recognition motif domain IPR000504 229 307 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001229529 502 604739 60.7 99.3 NP_001229528 508 604739 60.3 99.3 XP_016883627 476 604739 60.3 99.3 NP_004893 524 604739 57.9 99.3 NP_001310353 529 604739 57.9 99.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB6628 Download

>KIBB6628  1218 bp
ATGGCATCTGATGACTTTGACATAGTGATTGAGGCCATGCTGGAAGCTCCCTATAAAAAA
GAAGAGGATGAGCAACAAAGGAAAGAAGTTAAAAAGGATTATCCTAGCAATACCACCAGC
AGCACCAGCAACAGTGGCAATGAGACCAGTGGAAGCAGCACCATCGGGGAGACAAGCAAT
CGTAGTCGAGATCGGGATCGGTATAGACGGAGAAATAGTCGGAGCCGAAGTCCAGGTCGG
CAGTGTCGTCACCGTAGCCGTAGCTGGGATCGTCGACATGGTAGTGAGTCGCGAAGTCGG
GACCATCGTCGTGAGGATCGTGTGCATTACAGGAGTCCTCCACTTGCCACTGGGGAGCCA
GTTGATAATCTGAGTCCTGAGGAGCGTGATGCCCGCACAGTTTTCTGTATGCAGTTAGCT
GCCCGAATTCGGCCTCGAGATCTGGAGGACTTTTTCTCTGCTGTAGGCAAGGTTCGCGAT
GTACGTATCATTTCAGATCGGAACTCACGTCGTTCTAAGGGCATTGCCTACGTGGAATTC
TGTGAAATCCAGTCTGTGCCACTGGCCATTGGGCTGACTGGGCAGCGGTTGCTGGGAGTG
CCTATCATTGTACAGGCTTCACAGGCAGAGAAAAACCGACTGGCAGCCATGGCCAACAAC
CTGCAAAAGGGCAATGGTGGACCAATGCGCCTCTATGTGGGTTCCCTGCACTTCAATATC
ACTGAAGACATGCTCCGGGGCATCTTTGAGCCCTTTGGTAAAATTGATAATATTGTCCTG
ATGAAGGACTCAGATACAGGCCGCTCTAAAGGTTATGGTTTCATCACGTTCTCTGATTCT
GAGTGTGCCCGGCGGGCCCTGGAACAGTTGAATGGGTTTGAGCTTGCTGGTCGACCTATG
AGGGTTGGCCATGTGACTGAGCGACTGGATGGTGGCACAGACATCACTTTTCCTGATGGG
GACCAGGAGCTGGATCTGGGATCAGCAGGTGGACGTTTTCAGCTCATGGCAAAACTGGCA
GAAGGCGCTGGAATCCAACTGCCAAGCACTGCTGCTGCTGCTGCTGCCGCCGCCGCCGCC
CAGGCTGCTGCCTTGCAACTGAATGGAGCAGTTCCCTTGGGGGCCCTGAATCCAGCAGCT
CTGACTGCTCTGAGTCCAGCCCTGAACCTTGCCTCCCAGTGTTTGCAGCTCTCCAGCCTC
TTTACCCCCCAGACCATG

ORF Protein

Cloned ORF protein sequence for pFN21AB6628 Download

>KIBB6628  406 aa
MASDDFDIVIEAMLEAPYKKEEDEQQRKEVKKDYPSNTTSSTSNSGNETSGSSTIGETSN
RSRDRDRYRRRNSRSRSPGRQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATGEP
VDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF
CEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNI
TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM
RVGHVTERLDGGTDITFPDGDQELDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAAAAAAA
QAAALQLNGAVPLGALNPAALTALSPALNLASQCLQLSSLFTPQTM

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB6628 Download

>pFN21AB6628  5923 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCATCTGATGACTTTGACATAGTGATTGAGGC
CATGCTGGAAGCTCCCTATAAAAAAGAAGAGGATGAGCAACAAAGGAAAGAAGTTAAAAA
GGATTATCCTAGCAATACCACCAGCAGCACCAGCAACAGTGGCAATGAGACCAGTGGAAG
CAGCACCATCGGGGAGACAAGCAATCGTAGTCGAGATCGGGATCGGTATAGACGGAGAAA
TAGTCGGAGCCGAAGTCCAGGTCGGCAGTGTCGTCACCGTAGCCGTAGCTGGGATCGTCG
ACATGGTAGTGAGTCGCGAAGTCGGGACCATCGTCGTGAGGATCGTGTGCATTACAGGAG
TCCTCCACTTGCCACTGGGGAGCCAGTTGATAATCTGAGTCCTGAGGAGCGTGATGCCCG
CACAGTTTTCTGTATGCAGTTAGCTGCCCGAATTCGGCCTCGAGATCTGGAGGACTTTTT
CTCTGCTGTAGGCAAGGTTCGCGATGTACGTATCATTTCAGATCGGAACTCACGTCGTTC
TAAGGGCATTGCCTACGTGGAATTCTGTGAAATCCAGTCTGTGCCACTGGCCATTGGGCT
GACTGGGCAGCGGTTGCTGGGAGTGCCTATCATTGTACAGGCTTCACAGGCAGAGAAAAA
CCGACTGGCAGCCATGGCCAACAACCTGCAAAAGGGCAATGGTGGACCAATGCGCCTCTA
TGTGGGTTCCCTGCACTTCAATATCACTGAAGACATGCTCCGGGGCATCTTTGAGCCCTT
TGGTAAAATTGATAATATTGTCCTGATGAAGGACTCAGATACAGGCCGCTCTAAAGGTTA
TGGTTTCATCACGTTCTCTGATTCTGAGTGTGCCCGGCGGGCCCTGGAACAGTTGAATGG
GTTTGAGCTTGCTGGTCGACCTATGAGGGTTGGCCATGTGACTGAGCGACTGGATGGTGG
CACAGACATCACTTTTCCTGATGGGGACCAGGAGCTGGATCTGGGATCAGCAGGTGGACG
TTTTCAGCTCATGGCAAAACTGGCAGAAGGCGCTGGAATCCAACTGCCAAGCACTGCTGC
TGCTGCTGCTGCCGCCGCCGCCGCCCAGGCTGCTGCCTTGCAACTGAATGGAGCAGTTCC
CTTGGGGGCCCTGAATCCAGCAGCTCTGACTGCTCTGAGTCCAGCCCTGAACCTTGCCTC
CCAGTGTTTGCAGCTCTCCAGCCTCTTTACCCCCCAGACCATGGTTTAAACGAATTCGGG
CTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTA
ACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAAC
CCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACC
ACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTA
TTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATG
TTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGT
GGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCC
CAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATG
GTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTT
CAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCC
TTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAA
GATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGT
AAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTT
CTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGC
ATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACG
GATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCG
GCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAAC
ATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCA
AACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTA
ACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGAT
AAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAA
TCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAG
CCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAAT
AGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGAC
CAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAAT
CAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTA
AAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAA
ATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTC
CCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGT
CCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCA
GTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCG
ACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTAT
CGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTA
CAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCT
GCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAAC
AAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAA
AAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAA
ACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTT
TATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCAT
GAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCA
TAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTG
TTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACA
ATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGC
AGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT