PPP5C ORF clone pFN21AB5893

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Halotag ORF Clone pFN21AB5893

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Clone info.

Species

human

Clone Name

pFN21AB5893 Sequence (with vector) Restriction Map

Product ID

FHC03434

Flexi Clone PID

FXC03434

ORF Sequence

DNA sequence (1497 bp)
Protein sequence (499 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527518]

Gene

KIBB5893

Symbol

PPP5C

Alias : PP5, PPP5, PPT

Description

protein phosphatase 5, catalytic subunit, transcript variant 1

Original Clone ID

cs00593

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1497 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 499 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12684.1 1.7e-208 100.0 PPP5C CCDS6079.1 5.9e-45 41.2 PPP2CB CCDS4173.1 6.2e-44 41.0 PPP2CA CCDS10669.1 2.4e-42 41.0 PPP4C CCDS6861.1 3.8e-39 42.4 PPP6C The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR006186 236 263 PR00114 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase IPR006186 266 293 PR00114 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase IPR006186 299 323 PR00114 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase IPR006186 333 359 PR00114 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase IPR006186 363 390 PR00114 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase IPR006186 419 439 PR00114 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase IPR006186 441 457 PR00114 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase HMMPfam IPR001440 28 61 PF00515 Tetratricopeptide TPR-1 IPR001440 97 129 PF00515 Tetratricopeptide TPR-1 IPR013235 135 228 PF08321 Serine/threonine phosphatase IPR004843 236 430 PF00149 Metallo-dependent phosphatase HMMSmart IPR019734 28 61 SM00028 Tetratricopeptide repeat IPR019734 62 95 SM00028 Tetratricopeptide repeat IPR019734 96 129 SM00028 Tetratricopeptide repeat IPR006186 204 480 SM00156 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase ProfileScan IPR019734 28 61 PS50005 Tetratricopeptide repeat IPR013026 28 129 PS50293 Tetratricopeptide repeat-containing IPR019734 62 95 PS50005 Tetratricopeptide repeat IPR019734 96 129 PS50005 Tetratricopeptide repeat
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006238 499 600658 100.0 100.0 XP_016882424 551 600658 99.4 96.8 NP_001191213 477 600658 95.6 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB5893 Download

>KIBB5893  1497 bp
ATGGCGATGGCGGAGGGCGAGAGGACTGAGTGTGCTGAGCCCCCCCGGGACGAACCCCCG
GCTGATGGAGCTCTGAAGCGGGCAGAGGAGCTCAAGACTCAGGCCAATGACTACTTCAAA
GCCAAGGACTACGAGAACGCCATCAAGTTCTACAGCCAGGCCATCGAGCTGAACCCCAGC
AATGCCATCTACTATGGCAACCGCAGCCTGGCCTACCTGCGCACTGAGTGCTATGGCTAC
GCGCTGGGAGACGCCACGCGGGCCATTGAGCTGGACAAGAAGTACATCAAGGGTTATTAC
CGCCGGGCTGCCAGCAACATGGCACTGGGCAAGTTCCGGGCCGCGCTGCGAGACTACGAG
ACGGTGGTCAAGGTGAAGCCCCATGACAAGGATGCCAAAATGAAATACCAGGAGTGCAAC
AAGATCGTGAAGCAGAAGGCCTTTGAGCGGGCCATCGCGGGCGACGAGCACAAGCGCTCC
GTGGTGGACTCGCTGGACATCGAGAGCATGACCATTGAGGATGAGTACAGCGGACCCAAG
CTTGAAGACGGCAAAGTGACAATCAGTTTCATGAAGGAGCTCATGCAGTGGTACAAGGAC
CAGAAGAAACTGCACCGGAAATGTGCCTACCAGATTCTGGTACAGGTCAAAGAGGTCCTC
TCCAAGCTGAGCACGCTCGTGGAAACCACACTCAAAGAGACAGAGAAGATTACAGTATGT
GGGGACACCCATGGCCAGTTCTATGACCTCCTCAACATATTCGAGCTCAACGGTTTACCC
TCGGAGACCAACCCCTATATATTTAATGGTGACTTTGTGGACCGAGGCTCCTTCTCTGTA
GAAGTGATCCTCACCCTTTTCGGCTTCAAGCTCCTGTACCCAGATCACTTTCACCTCCTT
CGAGGCAACCACGAGACAGACAACATGAACCAGATCTACGGTTTCGAGGGTGAGGTGAAG
GCCAAGTACACAGCCCAGATGTACGAGCTCTTTAGCGAGGTGTTCGAGTGGCTCCCGTTG
GCCCAGTGCATCAACGGCAAAGTGCTGATCATGCACGGAGGCCTGTTCAGTGAAGACGGT
GTCACCCTGGATGACATCCGGAAAATTGAGCGGAATCGACAACCCCCAGATTCAGGGCCC
ATGTGTGACCTGCTCTGGTCAGATCCACAGCCACAGAACGGGCGCTCGATCAGCAAGCGG
GGCGTGAGCTGTCAGTTTGGGCCTGACGTCACCAAGGCCTTCTTGGAAGAGAACAACCTG
GACTATATCATCCGCAGCCACGAAGTCAAGGCCGAGGGCTACGAGGTGGCTCACGGAGGC
CGCTGTGTCACCGTCTTCTCTGCCCCCAACTACTGCGACCAGATGGGGAACAAAGCCTCC
TACATCCACCTCCAGGGCTCTGACCTACGGCCTCAGTTCCACCAGTTCACAGCAGTGCCT
CATCCCAACGTCAAGCCCATGGCCTATGCCAACACGCTGCTGCAGCTAGGAATGATG

ORF Protein

Cloned ORF protein sequence for pFN21AB5893 Download

>KIBB5893  499 aa
MAMAEGERTECAEPPRDEPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS
NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYE
TVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPK
LEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVC
GDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLL
RGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDG
VTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFLEENNL
DYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVP
HPNVKPMAYANTLLQLGMM

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB5893 Download

>pFN21AB5893  6202 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCGATGGCGGAGGGCGAGAGGACTGAGTGTGC
TGAGCCCCCCCGGGACGAACCCCCGGCTGATGGAGCTCTGAAGCGGGCAGAGGAGCTCAA
GACTCAGGCCAATGACTACTTCAAAGCCAAGGACTACGAGAACGCCATCAAGTTCTACAG
CCAGGCCATCGAGCTGAACCCCAGCAATGCCATCTACTATGGCAACCGCAGCCTGGCCTA
CCTGCGCACTGAGTGCTATGGCTACGCGCTGGGAGACGCCACGCGGGCCATTGAGCTGGA
CAAGAAGTACATCAAGGGTTATTACCGCCGGGCTGCCAGCAACATGGCACTGGGCAAGTT
CCGGGCCGCGCTGCGAGACTACGAGACGGTGGTCAAGGTGAAGCCCCATGACAAGGATGC
CAAAATGAAATACCAGGAGTGCAACAAGATCGTGAAGCAGAAGGCCTTTGAGCGGGCCAT
CGCGGGCGACGAGCACAAGCGCTCCGTGGTGGACTCGCTGGACATCGAGAGCATGACCAT
TGAGGATGAGTACAGCGGACCCAAGCTTGAAGACGGCAAAGTGACAATCAGTTTCATGAA
GGAGCTCATGCAGTGGTACAAGGACCAGAAGAAACTGCACCGGAAATGTGCCTACCAGAT
TCTGGTACAGGTCAAAGAGGTCCTCTCCAAGCTGAGCACGCTCGTGGAAACCACACTCAA
AGAGACAGAGAAGATTACAGTATGTGGGGACACCCATGGCCAGTTCTATGACCTCCTCAA
CATATTCGAGCTCAACGGTTTACCCTCGGAGACCAACCCCTATATATTTAATGGTGACTT
TGTGGACCGAGGCTCCTTCTCTGTAGAAGTGATCCTCACCCTTTTCGGCTTCAAGCTCCT
GTACCCAGATCACTTTCACCTCCTTCGAGGCAACCACGAGACAGACAACATGAACCAGAT
CTACGGTTTCGAGGGTGAGGTGAAGGCCAAGTACACAGCCCAGATGTACGAGCTCTTTAG
CGAGGTGTTCGAGTGGCTCCCGTTGGCCCAGTGCATCAACGGCAAAGTGCTGATCATGCA
CGGAGGCCTGTTCAGTGAAGACGGTGTCACCCTGGATGACATCCGGAAAATTGAGCGGAA
TCGACAACCCCCAGATTCAGGGCCCATGTGTGACCTGCTCTGGTCAGATCCACAGCCACA
GAACGGGCGCTCGATCAGCAAGCGGGGCGTGAGCTGTCAGTTTGGGCCTGACGTCACCAA
GGCCTTCTTGGAAGAGAACAACCTGGACTATATCATCCGCAGCCACGAAGTCAAGGCCGA
GGGCTACGAGGTGGCTCACGGAGGCCGCTGTGTCACCGTCTTCTCTGCCCCCAACTACTG
CGACCAGATGGGGAACAAAGCCTCCTACATCCACCTCCAGGGCTCTGACCTACGGCCTCA
GTTCCACCAGTTCACAGCAGTGCCTCATCCCAACGTCAAGCCCATGGCCTATGCCAACAC
GCTGCTGCAGCTAGGAATGATGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCT
AGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTG
AGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGA
GCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAA
AAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGC
AATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATG
TGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGG
ATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGG
GGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGC
ACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAAT
ATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAG
AGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTT
CCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGT
GCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGC
CCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTA
TCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGAC
TTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAA
TTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACT
ATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGC
CTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACG
ATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTA
GCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTG
CGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGG
TCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATC
TACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGT
GCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTAT
CAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGA
ACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGT
TTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGT
GGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGC
GCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAA
GCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCT
CCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTA
ACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTG
GTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGC
CTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTA
CCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTG
GTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTT
TGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGG
TCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAA
CGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGG
ATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAA
TTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGC
TGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATC
CACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGT
CCGGCGTAGAGGATCGAGATCT