HMG20A ORF clone pFN21AB5656

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Halotag ORF Clone pFN21AB5656

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Clone info.

Species

human

Clone Name

pFN21AB5656 Sequence (with vector) Restriction Map

Product ID

FHC02213

Flexi Clone PID

FXC02213

ORF Sequence

DNA sequence (1041 bp)
Protein sequence (347 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463731]

Gene

KIBB5656

Symbol

HMG20A

Alias : HMGX1, HMGXB1

Description

high mobility group 20A, transcript variant 1

Original Clone ID

ej00714

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1041 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 347 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10295.1 5.6e-82 100.0 HMG20A CCDS45919.1 8.5e-33 48.4 HMG20B The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000910 103 171 PF00505 High mobility group HMMSmart IPR000910 102 172 SM00398 High mobility group ProfileScan IPR000910 103 171 PS50118 High mobility group
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001291433 347 605534 100.0 100.0 NP_060670 347 605534 100.0 100.0 XP_011519460 347 605534 100.0 100.0 NP_006330 317 605535 48.4 90.8 XP_016881633 316 605535 48.8 90.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB5656 Download

>KIBB5656  1041 bp
ATGGAAAACTTGATGACTAGCTCCACCCTACCGCCCCTTTTTGCAGATGAAGACGGTTCC
AAGGAGAGTAATGATCTGGCTACCACTGGGTTAAATCACCCAGAGGTTCCATACAGTAGT
GGCGCCACATCATCCACCAACAATCCAGAATTTGTGGAGGATCTCTCTCAAGGTCAGTTG
CTTCAGAGTGAGTCTTCAAATGCAGCAGAAGGCAATGAACAGAGGCATGAAGATGAGCAA
CGAAGTAAACGAGGAGGTTGGTCCAAAGGAAGAAAGAGGAAGAAACCTCTTCGAGACAGC
AATGCACCCAAATCCCCCCTTACAGGATATGTTCGGTTCATGAATGAGCGTCGAGAACAA
CTTCGAGCAAAGAGACCAGAAGTCCCATTTCCAGAAATCACAAGGATGTTAGGCAATGAA
TGGAGTAAACTGCCTCCTGAGGAAAAACAGCGCTACCTTGATGAAGCAGACAGAGATAAG
GAGCGTTACATGAAGGAACTGGAACAGTATCAGAAAACAGAGGCCTACAAGGTCTTCAGT
AGGAAAACCCAGGACCGTCAGAAAGGCAAATCTCATAGGCAAGATGCAGCCCGGCAGGCC
ACTCATGATCATGAGAAAGAAACAGAGGTAAAGGAACGGTCTGTTTTTGACATCCCTATA
TTTACAGAGGAATTCTTGAACCATAGCAAAGCTCGGGAAGCAGAGCTCCGCCAGCTTCGC
AAATCCAACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCACGTGGAGAGCATG
CGCACAGCAGTGGAGAAGCTGGAGGTGGATGTGATCCAGGAGCGGAGCCGCAACACAGTC
TTACAGCAGCACCTGGAGACCCTGCGGCAGGTGCTGACCAGCAGCTTTGCCAGCATGCCC
TTGCCTGGAAGTGGAGAGACACCTACAGTGGACACCATTGACTCATATATGAACAGACTG
CACAGTATTATTTTAGCTAATCCCCAAGACAATGAAAACTTCATAGCTACAGTTCGAGAA
GTTGTGAACAGACTCGATCGT

ORF Protein

Cloned ORF protein sequence for pFN21AB5656 Download

>KIBB5656  347 aa
MENLMTSSTLPPLFADEDGSKESNDLATTGLNHPEVPYSSGATSSTNNPEFVEDLSQGQL
LQSESSNAAEGNEQRHEDEQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQ
LRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQKTEAYKVFS
RKTQDRQKGKSHRQDAARQATHDHEKETEVKERSVFDIPIFTEEFLNHSKAREAELRQLR
KSNMEFEERNAALQKHVESMRTAVEKLEVDVIQERSRNTVLQQHLETLRQVLTSSFASMP
LPGSGETPTVDTIDSYMNRLHSIILANPQDNENFIATVREVVNRLDR

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB5656 Download

>pFN21AB5656  5746 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAAAACTTGATGACTAGCTCCACCCTACCGCC
CCTTTTTGCAGATGAAGACGGTTCCAAGGAGAGTAATGATCTGGCTACCACTGGGTTAAA
TCACCCAGAGGTTCCATACAGTAGTGGCGCCACATCATCCACCAACAATCCAGAATTTGT
GGAGGATCTCTCTCAAGGTCAGTTGCTTCAGAGTGAGTCTTCAAATGCAGCAGAAGGCAA
TGAACAGAGGCATGAAGATGAGCAACGAAGTAAACGAGGAGGTTGGTCCAAAGGAAGAAA
GAGGAAGAAACCTCTTCGAGACAGCAATGCACCCAAATCCCCCCTTACAGGATATGTTCG
GTTCATGAATGAGCGTCGAGAACAACTTCGAGCAAAGAGACCAGAAGTCCCATTTCCAGA
AATCACAAGGATGTTAGGCAATGAATGGAGTAAACTGCCTCCTGAGGAAAAACAGCGCTA
CCTTGATGAAGCAGACAGAGATAAGGAGCGTTACATGAAGGAACTGGAACAGTATCAGAA
AACAGAGGCCTACAAGGTCTTCAGTAGGAAAACCCAGGACCGTCAGAAAGGCAAATCTCA
TAGGCAAGATGCAGCCCGGCAGGCCACTCATGATCATGAGAAAGAAACAGAGGTAAAGGA
ACGGTCTGTTTTTGACATCCCTATATTTACAGAGGAATTCTTGAACCATAGCAAAGCTCG
GGAAGCAGAGCTCCGCCAGCTTCGCAAATCCAACATGGAGTTTGAGGAGAGGAATGCAGC
CCTGCAAAAGCACGTGGAGAGCATGCGCACAGCAGTGGAGAAGCTGGAGGTGGATGTGAT
CCAGGAGCGGAGCCGCAACACAGTCTTACAGCAGCACCTGGAGACCCTGCGGCAGGTGCT
GACCAGCAGCTTTGCCAGCATGCCCTTGCCTGGAAGTGGAGAGACACCTACAGTGGACAC
CATTGACTCATATATGAACAGACTGCACAGTATTATTTTAGCTAATCCCCAAGACAATGA
AAACTTCATAGCTACAGTTCGAGAAGTTGTGAACAGACTCGATCGTGTTTAAACGAATTC
GGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTG
CTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCAT
AACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAA
ACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCT
TTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTT
ATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAA
TGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATA
GCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTA
ATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATG
CTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATT
CCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTA
AAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGC
GGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAA
GTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGC
CGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTT
ACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACT
GCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCAC
AACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATA
CCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTA
TTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCG
GATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGAT
AAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGT
AAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGA
AATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACC
GACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAG
AATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACC
GTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACA
AAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGT
TTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACC
TGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATC
TCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGC
CCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACT
TATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTG
CTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTA
TCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCA
AACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAA
AAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACG
AAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCC
TTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAAC
CATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTT
GCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGT
TTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGT
ACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAAC
CGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT