SNX4 ORF clone pFN21AB5326

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB5326

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Clone info.

Species

human

Clone Name

pFN21AB5326 Sequence (with vector) Restriction Map

Product ID

FHC08969

Flexi Clone PID

FXC08969

ORF Sequence

DNA sequence (1350 bp)
Protein sequence (450 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528425]

Gene

KIBB5326

Symbol

SNX4

Alias : ATG24B

Description

sorting nexin 4, transcript variant 1

Original Clone ID

bm03609

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1350 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 450 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3032.1 8.2e-171 100.0 SNX4 CCDS43865.1 4.6e-15 28.5 SNX30 CCDS755.2 1.7e-13 25.7 SNX7 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001683 59 183 PF00787 Phox homologous domain HMMSmart IPR001683 56 184 SM00312 Phox homologous domain ProfileScan IPR001683 61 187 PS50195 Phox homologous domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003785 450 605931 100.0 100.0 XP_016862903 482 605931 93.4 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB5326 Download

>KIBB5326  1350 bp
ATGGAGCAGGCACCTCCGGACCCCGAGCGGCAGCTCCAGCCGGCGCCCTTGGAGCCGCTG
GGCTCCCCAGACGCTGGGCTGGGGGCTGCGGTCGGCAAGGAAGCGGAGGGGGCCGGAGAA
GAGAGCTCTGGGGTCGACACGATGACACACAATAATTTTTGGTTGAAGAAGATAGAAATC
AGTGTTTCAGAAGCAGAAAAACGAACTGGAAGAAATGCCATGAACATGCAAGAAACATAT
ACTGCTTACCTCATTGAAACAAGGTCAGTTGAACATACCGATGGTCAGAGTGTCCTAACA
GACTCACTATGGCGGCGATATAGTGAATTTGAGTTGTTGAGAAGCTACCTTTTAGTTTAC
TATCCACATATTGTTGTGCCACCTCTGCCAGAAAAACGGGCAGAATTTGTTTGGCATAAA
CTCTCTGCTGACAACATGGATCCAGATTTTGTGGAGAGGCGACGGATTGGTTTAGAAAAC
TTTCTCTTGAGGATTGCTTCACATCCCATCCTTTGTAGAGACAAAATCTTCTATCTGTTT
TTAACACAGGAAGGTAACTGGAAGGAGACTGTGAATGAAACTGGGTTTCAGCTGAAGGCA
GACTCCAGGTTAAAAGCGCTTAATGCAACATTCAGAGTGAAAAACCCAGACAAGAGATTT
ACTGACCTTAAGCACTATAGTGATGAACTGCAGTCTGTCATCTCACATCTTCTTCGAGTC
AGAGCTAGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGGAATTATGGTCGA
GTTTTCAGTGAATGGAGTGCCATAGAAAAAGAAATGGGTGATGGACTGCAGAGTGCTGGT
CATCATATGGATGTGTATGCATCTTCTATTGATGATATTTTGGAAGATGAAGAACATTAT
GCAGATCAGTTAAAAGAGTATCTTTTTTATGCAGAAGCATTGCGGGCTGTGTGCAGGAAA
CATGAACTTATGCAGTATGACTTGGAGATGGCTGCTCAGGACTTAGCATCCAAGAAGCAG
CAGTGTGAGGAACTGGTAACTGGGACTGTGAGAACATTCTCTTTGAAGGGAATGACTACC
AAGCTCTTTGGTCAAGAAACTCCAGAGCAGAGAGAAGCCAGAATAAAGGTGCTAGAAGAA
CAAATAAATGAAGGAGAACAACAGCTAAAGTCTAAAAATCTGGAAGGCAGAGAATTTGTG
AAAAACGCATGGGCTGATATTGAACGCTTCAAAGAACAAAAGAACCGAGACTTAAAGGAG
GCCCTCATAAGCTATGCAGTCATGCAGATCAGTATGTGCAAAAAGGGAATTCAAGTTTGG
ACCAATGCTAAGGAATGCTTTAGCAAGATG

ORF Protein

Cloned ORF protein sequence for pFN21AB5326 Download

>KIBB5326  450 aa
MEQAPPDPERQLQPAPLEPLGSPDAGLGAAVGKEAEGAGEESSGVDTMTHNNFWLKKIEI
SVSEAEKRTGRNAMNMQETYTAYLIETRSVEHTDGQSVLTDSLWRRYSEFELLRSYLLVY
YPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFLLRIASHPILCRDKIFYLF
LTQEGNWKETVNETGFQLKADSRLKALNATFRVKNPDKRFTDLKHYSDELQSVISHLLRV
RARVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDVYASSIDDILEDEEHY
ADQLKEYLFYAEALRAVCRKHELMQYDLEMAAQDLASKKQQCEELVTGTVRTFSLKGMTT
KLFGQETPEQREARIKVLEEQINEGEQQLKSKNLEGREFVKNAWADIERFKEQKNRDLKE
ALISYAVMQISMCKKGIQVWTNAKECFSKM

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB5326 Download

>pFN21AB5326  6055 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAGCAGGCACCTCCGGACCCCGAGCGGCAGCT
CCAGCCGGCGCCCTTGGAGCCGCTGGGCTCCCCAGACGCTGGGCTGGGGGCTGCGGTCGG
CAAGGAAGCGGAGGGGGCCGGAGAAGAGAGCTCTGGGGTCGACACGATGACACACAATAA
TTTTTGGTTGAAGAAGATAGAAATCAGTGTTTCAGAAGCAGAAAAACGAACTGGAAGAAA
TGCCATGAACATGCAAGAAACATATACTGCTTACCTCATTGAAACAAGGTCAGTTGAACA
TACCGATGGTCAGAGTGTCCTAACAGACTCACTATGGCGGCGATATAGTGAATTTGAGTT
GTTGAGAAGCTACCTTTTAGTTTACTATCCACATATTGTTGTGCCACCTCTGCCAGAAAA
ACGGGCAGAATTTGTTTGGCATAAACTCTCTGCTGACAACATGGATCCAGATTTTGTGGA
GAGGCGACGGATTGGTTTAGAAAACTTTCTCTTGAGGATTGCTTCACATCCCATCCTTTG
TAGAGACAAAATCTTCTATCTGTTTTTAACACAGGAAGGTAACTGGAAGGAGACTGTGAA
TGAAACTGGGTTTCAGCTGAAGGCAGACTCCAGGTTAAAAGCGCTTAATGCAACATTCAG
AGTGAAAAACCCAGACAAGAGATTTACTGACCTTAAGCACTATAGTGATGAACTGCAGTC
TGTCATCTCACATCTTCTTCGAGTCAGAGCTAGAGTAGCAGATCGACTCTATGGTGTATA
TAAAGTACATGGGAATTATGGTCGAGTTTTCAGTGAATGGAGTGCCATAGAAAAAGAAAT
GGGTGATGGACTGCAGAGTGCTGGTCATCATATGGATGTGTATGCATCTTCTATTGATGA
TATTTTGGAAGATGAAGAACATTATGCAGATCAGTTAAAAGAGTATCTTTTTTATGCAGA
AGCATTGCGGGCTGTGTGCAGGAAACATGAACTTATGCAGTATGACTTGGAGATGGCTGC
TCAGGACTTAGCATCCAAGAAGCAGCAGTGTGAGGAACTGGTAACTGGGACTGTGAGAAC
ATTCTCTTTGAAGGGAATGACTACCAAGCTCTTTGGTCAAGAAACTCCAGAGCAGAGAGA
AGCCAGAATAAAGGTGCTAGAAGAACAAATAAATGAAGGAGAACAACAGCTAAAGTCTAA
AAATCTGGAAGGCAGAGAATTTGTGAAAAACGCATGGGCTGATATTGAACGCTTCAAAGA
ACAAAAGAACCGAGACTTAAAGGAGGCCCTCATAAGCTATGCAGTCATGCAGATCAGTAT
GTGCAAAAAGGGAATTCAAGTTTGGACCAATGCTAAGGAATGCTTTAGCAAGATGGTTTA
AACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTG
ATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAAT
AACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAG
TTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGAT
GCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGC
ATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAAC
CTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTT
GTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCT
TTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACC
CCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCC
TGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTC
GCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTG
GTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGAT
CTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGC
ACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAA
CTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAA
AAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGT
GATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCT
TTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAAT
GAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTG
CGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGG
ATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTT
ATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGG
CCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATG
GATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTC
GAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGT
TATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGG
CCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACG
AGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGAT
ACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTA
CCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCT
GTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCC
CCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAA
GACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATG
TAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAG
TATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTT
GATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTA
CGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTC
AGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCA
CCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGA
TGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTAC
CCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTT
TCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTA
GCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATC
GAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT